Wall clock time and date at job start Mon Mar 30 2020 07:38:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46897 * 1 3 3 C 1.46901 * 111.00398 * 2 1 4 4 C 1.50696 * 109.46850 * 66.04557 * 3 2 1 5 5 H 1.08000 * 120.00228 * 0.02562 * 4 3 2 6 6 C 1.37882 * 120.00054 * 180.02562 * 4 3 2 7 7 N 1.31517 * 119.99972 * 0.02562 * 6 4 3 8 8 Si 1.86798 * 119.99985 * 179.97438 * 6 4 3 9 9 H 1.48510 * 109.46795 * 90.00219 * 8 6 4 10 10 H 1.48502 * 109.47216 * 210.00271 * 8 6 4 11 11 H 1.48494 * 109.47355 * 330.00545 * 8 6 4 12 12 C 1.38903 * 110.99929 * 236.05059 * 2 1 3 13 13 C 1.39061 * 120.18341 * 64.20541 * 12 2 1 14 14 Cl 1.73597 * 119.97951 * 359.97438 * 13 12 2 15 15 C 1.38030 * 120.04530 * 180.26102 * 13 12 2 16 16 C 1.38631 * 120.42494 * 359.73899 * 15 13 12 17 17 C 1.37705 * 120.37010 * 0.02562 * 16 15 13 18 18 C 1.39828 * 119.94005 * 359.97438 * 17 16 15 19 19 C 1.47296 * 120.20667 * 179.97438 * 18 17 16 20 20 O 1.21521 * 120.00085 * 179.97438 * 19 18 17 21 21 O 1.34764 * 120.00148 * 359.72596 * 19 18 17 22 22 H 1.08995 * 109.47342 * 183.95584 * 1 2 3 23 23 H 1.09004 * 109.46629 * 303.95275 * 1 2 3 24 24 H 1.09002 * 109.47282 * 63.94763 * 1 2 3 25 25 H 1.08999 * 109.47585 * 186.05055 * 3 2 1 26 26 H 1.09003 * 109.47284 * 306.05163 * 3 2 1 27 27 H 0.96995 * 119.99775 * 179.97438 * 7 6 4 28 28 H 1.08005 * 119.78768 * 179.72220 * 15 13 12 29 29 H 1.08003 * 119.81635 * 179.97438 * 16 15 13 30 30 H 1.08003 * 120.02963 * 180.02562 * 17 16 15 31 31 H 0.96694 * 117.00083 * 180.02562 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.6370 2.0471 1.2984 5 1 1.0747 1.5112 2.0488 6 6 2.0269 3.3494 1.5285 7 7 2.7113 4.0022 0.6146 8 14 1.5819 4.1871 3.1377 9 1 2.6586 3.9510 4.1330 10 1 1.4293 5.6467 2.9103 11 1 0.3042 3.6297 3.6492 12 6 1.9667 -0.7242 -1.0757 13 6 1.7289 -0.2956 -2.3771 14 17 0.8071 1.1479 -2.6602 15 6 2.2204 -1.0204 -3.4441 16 6 2.9572 -2.1748 -3.2288 17 6 3.2071 -2.6123 -1.9472 18 6 2.7166 -1.8900 -0.8550 19 6 2.9800 -2.3529 0.5182 20 8 2.5523 -1.7220 1.4647 21 8 3.6909 -3.4790 0.7250 22 1 -0.3634 -1.0252 0.0709 23 1 -0.3633 0.5740 0.8525 24 1 -0.3634 0.4513 -0.9232 25 1 3.0798 1.3444 -0.1083 26 1 1.5611 1.9274 -0.8309 27 1 2.9852 4.9185 0.7764 28 1 2.0294 -0.6861 -4.4532 29 1 3.3366 -2.7345 -4.0709 30 1 3.7821 -3.5122 -1.7858 31 1 3.8376 -3.7431 1.6436 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000234262946.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:38:55 Heat of formation + Delta-G solvation = -42.983094 kcal Electronic energy + Delta-G solvation = -18612.249390 eV Core-core repulsion = 15499.580226 eV Total energy + Delta-G solvation = -3112.669164 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 269.061 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.25034 -38.78675 -36.37454 -36.00633 -35.39166 -32.52185 -31.11479 -29.62561 -27.15928 -25.27096 -24.07774 -22.71330 -21.14933 -20.28875 -17.80480 -17.08410 -16.42019 -15.81027 -15.42998 -15.20348 -14.77398 -14.61183 -14.07230 -13.68440 -13.25360 -13.10386 -12.88639 -12.10981 -11.97022 -11.72614 -11.40878 -11.07271 -10.93922 -10.79660 -10.66422 -10.53067 -10.27860 -9.99266 -9.94907 -9.18572 -8.79445 -8.43138 -8.32633 -7.20421 -5.95529 -3.94695 0.83379 1.29288 2.36499 2.89764 3.36878 3.37311 3.42514 3.46944 3.85016 4.44266 4.67404 4.88637 5.02272 5.25124 5.39574 5.40125 5.61494 5.87599 6.07377 6.17405 6.23925 6.31159 6.46198 6.67648 6.77631 6.85601 7.29806 7.40188 7.87438 8.05467 8.18161 8.39525 8.60154 9.10743 9.66797 11.15286 Molecular weight = 269.06amu Principal moments of inertia in cm(-1) A = 0.018817 B = 0.007778 C = 0.006085 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1487.630047 B = 3599.142326 C = 4600.595232 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 N -0.497 5.497 3 C 0.183 3.817 4 C -0.498 4.498 5 H 0.065 0.935 6 C 0.054 3.946 7 N -0.899 5.899 8 Si 0.898 3.102 9 H -0.281 1.281 10 H -0.288 1.288 11 H -0.274 1.274 12 C 0.193 3.807 13 C -0.087 4.087 14 Cl -0.040 7.040 15 C -0.074 4.074 16 C -0.142 4.142 17 C -0.059 4.059 18 C -0.108 4.108 19 C 0.511 3.489 20 O -0.448 6.448 21 O -0.529 6.529 22 H 0.043 0.957 23 H 0.084 0.916 24 H 0.034 0.966 25 H 0.023 0.977 26 H 0.028 0.972 27 H 0.260 0.740 28 H 0.133 0.867 29 H 0.135 0.865 30 H 0.141 0.859 31 H 0.408 0.592 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.275 -13.567 -8.111 15.809 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 N -0.218 5.218 3 C 0.061 3.939 4 C -0.537 4.537 5 H 0.083 0.917 6 C -0.146 4.146 7 N -0.539 5.539 8 Si 0.726 3.274 9 H -0.207 1.207 10 H -0.214 1.214 11 H -0.199 1.199 12 C 0.095 3.905 13 C -0.117 4.117 14 Cl -0.010 7.010 15 C -0.094 4.094 16 C -0.160 4.160 17 C -0.078 4.078 18 C -0.110 4.110 19 C 0.351 3.649 20 O -0.331 6.331 21 O -0.342 6.342 22 H 0.061 0.939 23 H 0.102 0.898 24 H 0.052 0.948 25 H 0.042 0.958 26 H 0.046 0.954 27 H 0.069 0.931 28 H 0.151 0.849 29 H 0.153 0.847 30 H 0.158 0.842 31 H 0.266 0.734 Dipole moment (debyes) X Y Z Total from point charges -0.349 -13.124 -7.820 15.281 hybrid contribution -0.245 0.918 0.671 1.163 sum -0.594 -12.206 -7.149 14.158 Atomic orbital electron populations 1.22398 0.86373 1.00102 1.02439 1.59715 1.07860 1.18635 1.35637 1.20173 0.95282 0.79793 0.98688 1.21101 1.34565 0.96562 1.01440 0.91719 1.24949 0.95494 0.97277 0.96921 1.69968 1.38652 1.11362 1.33909 0.86498 0.78866 0.78282 0.83755 1.20741 1.21411 1.19868 1.19041 0.91378 0.91381 0.88676 1.22058 1.02046 0.92366 0.95199 1.98376 1.71605 1.35324 1.95733 1.21238 0.95675 0.94179 0.98289 1.20949 1.00900 0.97026 0.97115 1.21447 0.96269 0.98620 0.91479 1.18951 1.04335 0.96981 0.90767 1.20486 0.76296 0.78214 0.89907 1.91069 1.45653 1.53480 1.42930 1.84529 1.69854 1.43089 1.36727 0.93853 0.89753 0.94814 0.95843 0.95402 0.93060 0.84878 0.84742 0.84159 0.73425 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.69 9.08 60.06 0.55 1.23 16 2 N -0.50 -11.45 2.64 -180.06 -0.48 -11.93 16 3 C 0.18 4.91 4.19 -4.98 -0.02 4.89 16 4 C -0.50 -14.49 8.46 -34.44 -0.29 -14.78 16 5 H 0.06 1.90 7.12 -52.49 -0.37 1.52 16 6 C 0.05 1.58 5.46 -17.82 -0.10 1.49 16 7 N -0.90 -27.19 13.29 55.43 0.74 -26.45 16 8 Si 0.90 22.39 29.54 -169.99 -5.02 17.37 16 9 H -0.28 -6.99 7.11 56.52 0.40 -6.59 16 10 H -0.29 -7.06 7.11 56.52 0.40 -6.66 16 11 H -0.27 -6.69 7.11 56.52 0.40 -6.29 16 12 C 0.19 3.80 4.67 -83.56 -0.39 3.41 16 13 C -0.09 -1.53 5.95 -39.35 -0.23 -1.76 16 14 Cl -0.04 -0.73 22.74 -51.86 -1.18 -1.91 16 15 C -0.07 -1.00 9.81 -39.51 -0.39 -1.39 16 16 C -0.14 -1.64 10.02 -39.63 -0.40 -2.04 16 17 C -0.06 -0.77 9.61 -39.18 -0.38 -1.15 16 18 C -0.11 -1.86 5.89 -104.82 -0.62 -2.48 16 19 C 0.51 8.97 8.26 34.41 0.28 9.25 16 20 O -0.45 -9.78 15.81 -19.28 -0.30 -10.09 16 21 O -0.53 -6.72 12.68 -40.67 -0.52 -7.24 16 22 H 0.04 0.80 8.14 -51.93 -0.42 0.38 16 23 H 0.08 1.86 6.76 -51.93 -0.35 1.51 16 24 H 0.03 0.66 5.15 -51.93 -0.27 0.40 16 25 H 0.02 0.70 8.06 -51.93 -0.42 0.28 16 26 H 0.03 0.76 4.93 -51.93 -0.26 0.50 16 27 H 0.26 7.44 8.31 -40.82 -0.34 7.10 16 28 H 0.13 1.45 8.06 -52.48 -0.42 1.03 16 29 H 0.13 1.07 8.06 -52.48 -0.42 0.65 16 30 H 0.14 1.46 7.61 -52.48 -0.40 1.07 16 31 H 0.41 3.43 9.11 45.56 0.42 3.85 16 LS Contribution 280.73 15.07 4.23 4.23 Total: -1.00 -34.04 280.73 -6.57 -40.60 By element: Atomic # 1 Polarization: 0.79 SS G_CDS: -2.05 Total: -1.26 kcal Atomic # 6 Polarization: -1.35 SS G_CDS: -1.98 Total: -3.33 kcal Atomic # 7 Polarization: -38.64 SS G_CDS: 0.26 Total: -38.38 kcal Atomic # 8 Polarization: -16.50 SS G_CDS: -0.82 Total: -17.33 kcal Atomic # 14 Polarization: 22.39 SS G_CDS: -5.02 Total: 17.37 kcal Atomic # 17 Polarization: -0.73 SS G_CDS: -1.18 Total: -1.91 kcal Total LS contribution 4.23 Total: 4.23 kcal Total: -34.04 -6.57 -40.60 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000234262946.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.379 kcal (2) G-P(sol) polarization free energy of solvation -34.038 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.417 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.566 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.604 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.983 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds