Wall clock time and date at job start Mon Mar 30 2020 06:59:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31416 * 1 3 3 Si 1.86803 * 120.00033 * 2 1 4 4 H 1.48498 * 109.47371 * 179.97438 * 3 2 1 5 5 H 1.48504 * 109.46979 * 299.99607 * 3 2 1 6 6 H 1.48504 * 109.47204 * 59.99319 * 3 2 1 7 7 C 1.38951 * 120.00036 * 179.97438 * 2 1 3 8 8 H 1.07995 * 119.99744 * 180.02562 * 7 2 1 9 9 N 1.37091 * 119.99923 * 0.02562 * 7 2 1 10 10 C 1.34777 * 120.00108 * 179.97438 * 9 7 2 11 11 O 1.21292 * 119.99800 * 359.97438 * 10 9 7 12 12 C 1.50703 * 120.00161 * 179.97438 * 10 9 7 13 13 C 1.53000 * 109.46912 * 179.97438 * 12 10 9 14 14 C 1.50703 * 109.46912 * 179.97438 * 13 12 10 15 15 C 1.38211 * 119.99036 * 264.72643 * 14 13 12 16 16 C 1.38438 * 119.98466 * 179.79088 * 15 14 13 17 17 F 1.35096 * 120.01218 * 180.25378 * 16 15 14 18 18 C 1.38481 * 119.97560 * 0.48375 * 16 15 14 19 19 C 1.38166 * 119.98596 * 359.74981 * 18 16 15 20 20 C 1.38331 * 119.99702 * 85.00070 * 14 13 12 21 21 Cl 1.73603 * 119.98348 * 0.02562 * 20 14 13 22 22 H 0.96996 * 119.99812 * 0.02562 * 1 2 3 23 23 H 0.97005 * 120.00430 * 359.97438 * 9 7 2 24 24 H 1.09001 * 109.46980 * 59.99654 * 12 10 9 25 25 H 1.08992 * 109.47158 * 299.99760 * 12 10 9 26 26 H 1.09002 * 109.47398 * 300.00078 * 13 12 10 27 27 H 1.09001 * 109.47194 * 60.00258 * 13 12 10 28 28 H 1.07997 * 120.00935 * 0.02562 * 15 14 13 29 29 H 1.07996 * 120.01164 * 179.72490 * 18 16 15 30 30 H 1.08002 * 119.99524 * 180.02562 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3142 0.0000 0.0000 3 14 2.2482 1.6178 0.0000 4 1 3.7082 1.3465 0.0006 5 1 1.8895 2.3964 -1.2126 6 1 1.8893 2.3966 1.2124 7 6 2.0089 -1.2033 0.0005 8 1 3.0889 -1.2033 0.0010 9 7 1.3235 -2.3906 0.0005 10 6 1.9973 -3.5578 0.0005 11 8 3.2102 -3.5578 0.0001 12 6 1.2438 -4.8629 0.0011 13 6 2.2381 -6.0258 0.0004 14 6 1.4846 -7.3309 0.0016 15 6 1.2358 -7.9839 1.1940 16 6 0.5398 -9.1806 1.1954 17 9 0.2918 -9.8167 2.3612 18 6 0.1020 -9.7278 0.0010 19 6 0.3556 -9.0766 -1.1909 20 6 1.0470 -7.8780 -1.1912 21 17 1.3668 -7.0611 -2.6893 22 1 -0.4850 0.8400 -0.0004 23 1 0.3534 -2.3906 0.0005 24 1 0.6168 -4.9208 -0.8886 25 1 0.6176 -4.9205 0.8913 26 1 2.8641 -5.9681 -0.8901 27 1 2.8654 -5.9681 0.8899 28 1 1.5809 -7.5588 2.1249 29 1 -0.4371 -10.6636 0.0010 30 1 0.0139 -9.5030 -2.1225 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259570958.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 06:59:47 Heat of formation + Delta-G solvation = -81.950664 kcal Electronic energy + Delta-G solvation = -17489.122673 eV Core-core repulsion = 14223.991965 eV Total energy + Delta-G solvation = -3265.130708 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 271.052 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -49.09927 -39.58893 -38.13117 -36.44517 -34.27663 -33.53706 -31.24518 -30.63836 -29.49880 -25.65784 -23.86595 -22.99917 -21.35101 -19.08898 -17.83394 -17.49144 -16.88473 -16.70463 -15.88058 -15.75851 -14.71146 -14.60955 -14.26543 -14.02418 -13.67108 -13.48420 -13.28259 -12.68011 -12.36482 -12.14244 -11.74320 -11.57312 -11.41845 -11.27431 -11.10865 -10.71794 -10.55320 -10.34280 -10.22068 -9.52896 -9.22894 -8.69000 -8.37233 -7.97337 -6.41905 -3.82817 0.77888 0.91852 2.05902 3.16241 3.22249 3.26984 3.34287 3.91294 3.97362 4.17487 4.41131 4.52868 4.80347 5.00811 5.11833 5.23933 5.42782 5.48751 5.54479 5.63635 5.81715 5.84970 5.99034 6.00420 6.42234 6.46259 6.47871 6.57422 7.55339 8.05710 8.60072 9.17194 9.54476 10.05231 10.75810 Molecular weight = 271.05amu Principal moments of inertia in cm(-1) A = 0.028437 B = 0.003993 C = 0.003741 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 984.395931 B = 7010.239008 C = 7482.364151 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.901 5.901 2 C 0.023 3.977 3 Si 0.929 3.071 4 H -0.268 1.268 5 H -0.281 1.281 6 H -0.281 1.281 7 C -0.301 4.301 8 H 0.104 0.896 9 N -0.562 5.562 10 C 0.441 3.559 11 O -0.597 6.597 12 C -0.124 4.124 13 C -0.068 4.068 14 C -0.033 4.033 15 C -0.140 4.140 16 C 0.104 3.896 17 F -0.137 7.137 18 C -0.153 4.153 19 C -0.080 4.080 20 C -0.048 4.048 21 Cl -0.053 7.053 22 H 0.271 0.729 23 H 0.393 0.607 24 H 0.080 0.920 25 H 0.078 0.922 26 H 0.091 0.909 27 H 0.085 0.915 28 H 0.146 0.854 29 H 0.141 0.859 30 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.609 -17.895 -1.201 18.124 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.542 5.542 2 C -0.179 4.179 3 Si 0.756 3.244 4 H -0.192 1.192 5 H -0.207 1.207 6 H -0.207 1.207 7 C -0.430 4.430 8 H 0.122 0.878 9 N -0.197 5.197 10 C 0.228 3.772 11 O -0.483 6.483 12 C -0.164 4.164 13 C -0.105 4.105 14 C -0.034 4.034 15 C -0.159 4.159 16 C 0.085 3.915 17 F -0.116 7.116 18 C -0.172 4.172 19 C -0.099 4.099 20 C -0.075 4.075 21 Cl -0.024 7.024 22 H 0.081 0.919 23 H 0.226 0.774 24 H 0.098 0.902 25 H 0.096 0.904 26 H 0.109 0.891 27 H 0.104 0.896 28 H 0.164 0.836 29 H 0.159 0.841 30 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -1.912 -17.664 -1.292 17.814 hybrid contribution -0.391 0.776 0.096 0.874 sum -2.304 -16.888 -1.195 17.087 Atomic orbital electron populations 1.69624 1.05955 1.28077 1.50536 1.25273 0.95622 0.99746 0.97274 0.85810 0.79724 0.81147 0.77723 1.19202 1.20732 1.20738 1.19776 0.93425 0.82303 1.47521 0.87843 1.41910 1.09273 1.04693 1.63852 1.19843 0.88217 0.84915 0.84262 1.90515 1.13958 1.87414 1.56392 1.21426 0.98498 0.93334 1.03158 1.20428 0.96846 0.87818 1.05414 1.19867 0.96164 0.96943 0.90448 1.21083 1.00971 0.94536 0.99342 1.17733 0.99673 0.92585 0.81540 1.91512 1.92404 1.81258 1.46408 1.21022 1.03548 1.01934 0.90715 1.20876 0.97201 0.93215 0.98598 1.20919 1.03150 0.95494 0.87954 1.98399 1.94167 1.78590 1.31243 0.91901 0.77361 0.90186 0.90359 0.89103 0.89624 0.83638 0.84077 0.84040 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.90 -24.60 13.05 55.50 0.72 -23.87 16 2 C 0.02 0.60 5.50 -17.47 -0.10 0.51 16 3 Si 0.93 21.05 29.55 -169.99 -5.02 16.02 16 4 H -0.27 -6.06 7.11 56.52 0.40 -5.66 16 5 H -0.28 -6.28 7.11 56.52 0.40 -5.87 16 6 H -0.28 -6.27 7.11 56.52 0.40 -5.87 16 7 C -0.30 -8.41 9.68 -14.94 -0.14 -8.56 16 8 H 0.10 3.03 7.16 -52.49 -0.38 2.66 16 9 N -0.56 -14.32 5.29 -10.97 -0.06 -14.38 16 10 C 0.44 10.35 7.78 -10.98 -0.09 10.27 16 11 O -0.60 -15.99 15.56 5.55 0.09 -15.90 16 12 C -0.12 -2.15 5.68 -27.88 -0.16 -2.31 16 13 C -0.07 -1.05 4.14 -27.88 -0.12 -1.16 16 14 C -0.03 -0.43 5.14 -104.60 -0.54 -0.97 16 15 C -0.14 -1.65 9.66 -39.52 -0.38 -2.03 16 16 C 0.10 1.15 7.30 -39.42 -0.29 0.86 16 17 F -0.14 -1.57 17.27 2.25 0.04 -1.53 16 18 C -0.15 -1.44 10.03 -39.52 -0.40 -1.84 16 19 C -0.08 -0.78 9.83 -39.56 -0.39 -1.17 16 20 C -0.05 -0.58 6.31 -39.50 -0.25 -0.83 16 21 Cl -0.05 -0.68 27.15 -51.86 -1.41 -2.09 16 22 H 0.27 6.98 8.31 -40.82 -0.34 6.64 16 23 H 0.39 9.62 7.90 -40.82 -0.32 9.29 16 24 H 0.08 1.31 7.90 -51.93 -0.41 0.90 16 25 H 0.08 1.23 8.14 -51.93 -0.42 0.81 16 26 H 0.09 1.51 7.08 -51.93 -0.37 1.15 16 27 H 0.09 1.34 8.01 -51.93 -0.42 0.93 16 28 H 0.15 1.55 8.06 -52.49 -0.42 1.13 16 29 H 0.14 0.98 8.06 -52.49 -0.42 0.55 16 30 H 0.14 1.05 8.06 -52.49 -0.42 0.62 16 LS Contribution 288.91 15.07 4.35 4.35 Total: -1.00 -30.50 288.91 -6.85 -37.34 By element: Atomic # 1 Polarization: 9.99 SS G_CDS: -2.72 Total: 7.28 kcal Atomic # 6 Polarization: -4.37 SS G_CDS: -2.84 Total: -7.22 kcal Atomic # 7 Polarization: -38.92 SS G_CDS: 0.67 Total: -38.26 kcal Atomic # 8 Polarization: -15.99 SS G_CDS: 0.09 Total: -15.90 kcal Atomic # 9 Polarization: -1.57 SS G_CDS: 0.04 Total: -1.53 kcal Atomic # 14 Polarization: 21.05 SS G_CDS: -5.02 Total: 16.02 kcal Atomic # 17 Polarization: -0.68 SS G_CDS: -1.41 Total: -2.09 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -30.50 -6.85 -37.34 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259570958.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.610 kcal (2) G-P(sol) polarization free energy of solvation -30.496 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.105 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.845 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.341 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.951 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds