Wall clock time and date at job start Mon Mar 30 2020 07:46:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35975 * 116.99925 * 2 1 4 4 C 1.38716 * 119.99847 * 0.02562 * 3 2 1 5 5 C 1.38201 * 119.98770 * 179.97438 * 4 3 2 6 6 Cl 1.73599 * 120.01063 * 180.02562 * 5 4 3 7 7 C 1.38824 * 119.97775 * 0.02562 * 5 4 3 8 8 O 1.36013 * 120.00084 * 180.02562 * 7 5 4 9 9 C 1.42895 * 117.00235 * 269.97911 * 8 7 5 10 10 C 1.38626 * 119.99588 * 359.97438 * 7 5 4 11 11 C 1.50696 * 119.99654 * 179.97438 * 10 7 5 12 12 H 1.09001 * 109.47545 * 325.00329 * 11 10 7 13 13 N 1.46900 * 109.47209 * 205.00026 * 11 10 7 14 14 C 1.50706 * 109.47259 * 84.99988 * 11 10 7 15 15 H 1.08005 * 119.99758 * 0.02562 * 14 11 10 16 16 C 1.37871 * 120.00102 * 180.02562 * 14 11 10 17 17 N 1.31516 * 120.00217 * 0.02562 * 16 14 11 18 18 Si 1.86800 * 119.99766 * 179.97438 * 16 14 11 19 19 H 1.48501 * 109.47057 * 179.97438 * 18 16 14 20 20 H 1.48500 * 109.47389 * 300.00068 * 18 16 14 21 21 H 1.48504 * 109.47102 * 60.00417 * 18 16 14 22 22 C 1.38185 * 120.00905 * 0.25372 * 10 7 5 23 23 H 1.09003 * 109.46875 * 299.99417 * 1 2 3 24 24 H 1.08997 * 109.47171 * 59.99729 * 1 2 3 25 25 H 1.09000 * 109.47287 * 180.02562 * 1 2 3 26 26 H 1.07993 * 120.00380 * 0.02562 * 4 3 2 27 27 H 1.09008 * 109.46856 * 300.00100 * 9 8 7 28 28 H 1.08997 * 109.47121 * 59.99534 * 9 8 7 29 29 H 1.09002 * 109.47180 * 180.02562 * 9 8 7 30 30 H 1.00900 * 111.00100 * 299.99420 * 13 11 10 31 31 H 1.00898 * 111.00378 * 63.95632 * 13 11 10 32 32 H 0.97001 * 119.99646 * 359.97438 * 17 16 14 33 33 H 1.08001 * 119.98838 * 179.72475 * 22 10 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 1.2908 2.3749 0.0005 5 6 1.9184 3.6062 0.0011 6 17 0.9735 5.0624 0.0024 7 6 3.3048 3.6780 0.0005 8 8 3.9230 4.8896 0.0016 9 6 4.2177 5.4687 -1.2711 10 6 4.0591 2.5150 0.0000 11 6 5.5640 2.5930 -0.0012 12 1 5.8829 3.4524 -0.5908 13 7 6.1176 1.3647 -0.5869 14 6 6.0604 2.7427 1.4139 15 1 5.3565 2.7774 2.2323 16 6 7.4131 2.8353 1.6638 17 7 8.2704 2.7935 0.6672 18 14 8.0283 3.0216 3.4177 19 1 9.5113 3.0984 3.4166 20 1 7.4683 4.2632 4.0095 21 1 7.5944 1.8507 4.2215 22 6 3.4312 1.2840 -0.0053 23 1 -0.3633 0.5138 0.8901 24 1 -0.3633 0.5139 -0.8899 25 1 -0.3634 -1.0277 0.0005 26 1 0.2124 2.3184 0.0014 27 1 4.8773 4.8037 -1.8288 28 1 3.2919 5.6127 -1.8279 29 1 4.7093 6.4309 -1.1274 30 1 5.8362 0.5531 -0.0577 31 1 5.8518 1.2746 -1.5560 32 1 7.9508 2.6972 -0.2436 33 1 4.0191 0.3781 -0.0102 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260164502.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:46:23 Heat of formation + Delta-G solvation = -51.939419 kcal Electronic energy + Delta-G solvation = -19067.619037 eV Core-core repulsion = 15927.250019 eV Total energy + Delta-G solvation = -3140.369018 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.076 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.25042 -38.64137 -36.46313 -36.29236 -34.54018 -31.57645 -29.83813 -29.28007 -27.33839 -26.22383 -25.62146 -23.10383 -21.80560 -20.44004 -17.90589 -17.28112 -16.79988 -16.67008 -15.75401 -15.07940 -14.94261 -14.50708 -14.34047 -13.80409 -13.51684 -13.39068 -13.26862 -12.83896 -12.34122 -11.90203 -11.84620 -11.69284 -11.32006 -11.08906 -10.81654 -10.68814 -10.40182 -10.25227 -9.99572 -9.50525 -8.98189 -8.33512 -8.16872 -7.76733 -7.60503 -6.16254 -3.97798 1.35459 1.53219 2.26964 3.29857 3.51886 3.53952 3.70669 3.72571 4.25886 4.64610 4.92879 4.98212 5.06700 5.22760 5.35067 5.45295 5.49905 5.62560 5.68690 5.74731 5.90685 5.94615 6.02464 6.14367 6.32464 6.63282 6.80925 7.13200 7.39294 7.90573 7.98561 8.25213 8.63506 8.69945 9.06219 9.83185 11.24023 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.017355 B = 0.007076 C = 0.005868 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1612.983699 B = 3956.074695 C = 4770.317193 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.314 6.314 3 C 0.133 3.867 4 C -0.215 4.215 5 C -0.016 4.016 6 Cl -0.070 7.070 7 C 0.073 3.927 8 O -0.308 6.308 9 C 0.037 3.963 10 C -0.034 4.034 11 C 0.245 3.755 12 H 0.049 0.951 13 N -0.830 5.830 14 C -0.597 4.597 15 H 0.047 0.953 16 C 0.040 3.960 17 N -0.891 5.891 18 Si 1.064 2.936 19 H -0.284 1.284 20 H -0.289 1.289 21 H -0.290 1.290 22 C -0.146 4.146 23 H 0.055 0.945 24 H 0.053 0.947 25 H 0.098 0.902 26 H 0.134 0.866 27 H 0.045 0.955 28 H 0.037 0.963 29 H 0.092 0.908 30 H 0.328 0.672 31 H 0.303 0.697 32 H 0.288 0.712 33 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.948 -0.815 -4.439 15.615 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.227 6.227 3 C 0.088 3.912 4 C -0.235 4.235 5 C -0.043 4.043 6 Cl -0.041 7.041 7 C 0.027 3.973 8 O -0.224 6.224 9 C -0.058 4.058 10 C -0.038 4.038 11 C 0.136 3.864 12 H 0.067 0.933 13 N -0.358 5.358 14 C -0.636 4.636 15 H 0.065 0.935 16 C -0.169 4.169 17 N -0.525 5.525 18 Si 0.893 3.107 19 H -0.209 1.209 20 H -0.216 1.216 21 H -0.216 1.216 22 C -0.165 4.165 23 H 0.073 0.927 24 H 0.072 0.928 25 H 0.117 0.883 26 H 0.152 0.848 27 H 0.064 0.936 28 H 0.056 0.944 29 H 0.110 0.890 30 H 0.143 0.857 31 H 0.114 0.886 32 H 0.101 0.899 33 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -12.777 -0.297 -3.236 13.184 hybrid contribution -3.050 -0.255 -1.165 3.275 sum -15.827 -0.552 -4.402 16.437 Atomic orbital electron populations 1.23036 0.78791 1.03700 1.01313 1.86109 1.21068 1.26591 1.88958 1.18781 0.92014 0.83494 0.96915 1.20725 0.99981 0.90265 1.12521 1.21099 0.90953 0.87394 1.04889 1.98330 1.72155 1.36746 1.96879 1.18155 0.87499 0.86518 1.05100 1.86189 1.77623 1.30430 1.28119 1.22921 0.99213 0.98526 0.85112 1.21747 1.01275 0.90067 0.90671 1.18348 0.80563 0.89921 0.97562 0.93334 1.59457 1.66815 1.05731 1.03822 1.21535 0.94380 1.57948 0.89747 0.93505 1.25591 0.92905 0.93161 1.05252 1.70566 1.37616 1.42368 1.01953 0.83645 0.76056 0.76434 0.74600 1.20896 1.21558 1.21649 1.20277 0.90699 0.98760 1.06804 0.92681 0.92800 0.88346 0.84819 0.93612 0.94419 0.88998 0.85744 0.88647 0.89939 0.84663 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.26 9.81 101.05 0.99 1.26 16 2 O -0.31 -4.62 10.50 -19.66 -0.21 -4.82 16 3 C 0.13 2.23 6.68 -39.24 -0.26 1.97 16 4 C -0.22 -3.40 8.82 -39.42 -0.35 -3.75 16 5 C -0.02 -0.28 6.33 -39.38 -0.25 -0.53 16 6 Cl -0.07 -1.08 28.50 -51.86 -1.48 -2.56 16 7 C 0.07 1.48 5.69 -39.22 -0.22 1.25 16 8 O -0.31 -6.37 9.14 -19.78 -0.18 -6.55 16 9 C 0.04 0.61 10.80 101.05 1.09 1.70 16 10 C -0.03 -0.73 4.99 -104.50 -0.52 -1.25 16 11 C 0.25 5.92 2.18 -70.02 -0.15 5.76 16 12 H 0.05 1.27 6.28 -51.93 -0.33 0.94 16 13 N -0.83 -18.43 7.38 -6.65 -0.05 -18.48 16 14 C -0.60 -16.65 8.71 -34.44 -0.30 -16.95 16 15 H 0.05 1.35 7.74 -52.48 -0.41 0.95 16 16 C 0.04 1.15 5.39 -17.82 -0.10 1.06 16 17 N -0.89 -26.60 13.51 55.43 0.75 -25.85 16 18 Si 1.06 25.60 29.90 -169.99 -5.08 20.52 16 19 H -0.28 -6.81 7.11 56.52 0.40 -6.41 16 20 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 21 H -0.29 -6.73 7.11 56.52 0.40 -6.33 16 22 C -0.15 -2.77 9.20 -39.44 -0.36 -3.13 16 23 H 0.05 0.51 7.66 -51.93 -0.40 0.11 16 24 H 0.05 0.47 7.66 -51.93 -0.40 0.07 16 25 H 0.10 0.72 8.14 -51.93 -0.42 0.30 16 26 H 0.13 1.72 6.29 -52.49 -0.33 1.39 16 27 H 0.05 0.77 7.17 -51.92 -0.37 0.40 16 28 H 0.04 0.54 8.14 -51.93 -0.42 0.12 16 29 H 0.09 1.34 8.14 -51.93 -0.42 0.91 16 30 H 0.33 7.06 7.20 -39.29 -0.28 6.77 16 31 H 0.30 5.85 9.06 -39.29 -0.36 5.50 16 32 H 0.29 8.55 6.40 -40.82 -0.26 8.29 16 33 H 0.14 2.47 6.28 -52.49 -0.33 2.14 16 LS Contribution 295.03 15.07 4.45 4.45 Total: -1.00 -31.36 295.03 -5.76 -37.12 By element: Atomic # 1 Polarization: 12.31 SS G_CDS: -3.52 Total: 8.79 kcal Atomic # 6 Polarization: -12.18 SS G_CDS: -0.43 Total: -12.62 kcal Atomic # 7 Polarization: -45.03 SS G_CDS: 0.70 Total: -44.33 kcal Atomic # 8 Polarization: -10.98 SS G_CDS: -0.39 Total: -11.37 kcal Atomic # 14 Polarization: 25.60 SS G_CDS: -5.08 Total: 20.52 kcal Atomic # 17 Polarization: -1.08 SS G_CDS: -1.48 Total: -2.56 kcal Total LS contribution 4.45 Total: 4.45 kcal Total: -31.36 -5.76 -37.12 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260164502.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.821 kcal (2) G-P(sol) polarization free energy of solvation -31.359 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.179 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.760 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.119 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.939 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds