Wall clock time and date at job start Mon Mar 30 2020 07:35:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53002 * 109.47228 * 2 1 4 4 C 1.52997 * 109.47113 * 119.99919 * 2 1 3 5 5 H 1.08999 * 109.47538 * 54.88608 * 4 2 1 6 6 C 1.50701 * 109.47399 * 174.88744 * 4 2 1 7 7 H 1.07996 * 120.00112 * 114.57198 * 6 4 2 8 8 C 1.37874 * 119.99810 * 294.56873 * 6 4 2 9 9 N 1.31510 * 120.00365 * 350.90445 * 8 6 4 10 10 Si 1.86806 * 120.00014 * 170.89964 * 8 6 4 11 11 H 1.48496 * 109.46905 * 0.02562 * 10 8 6 12 12 H 1.48500 * 109.46717 * 120.00148 * 10 8 6 13 13 H 1.48495 * 109.47328 * 240.00125 * 10 8 6 14 14 N 1.46503 * 109.47081 * 294.88617 * 4 2 1 15 15 C 1.34780 * 119.99647 * 84.99999 * 14 4 2 16 16 O 1.21708 * 120.00526 * 0.02562 * 15 14 4 17 17 C 1.46503 * 119.99647 * 179.97438 * 15 14 4 18 18 O 1.34986 * 126.00756 * 0.27835 * 17 15 14 19 19 C 1.33944 * 109.40104 * 180.15482 * 18 17 15 20 20 C 1.35076 * 108.81933 * 359.60466 * 19 18 17 21 21 C 1.36711 * 126.00602 * 179.97438 * 17 15 14 22 22 Cl 1.73596 * 126.66795 * 359.96481 * 21 17 15 23 23 H 1.08998 * 109.47174 * 307.12479 * 1 2 3 24 24 H 1.09003 * 109.46813 * 67.12236 * 1 2 3 25 25 H 1.08998 * 109.47126 * 187.12409 * 1 2 3 26 26 H 1.09003 * 109.47186 * 239.99828 * 2 1 3 27 27 H 1.09004 * 109.46909 * 179.97438 * 3 2 1 28 28 H 1.08997 * 109.46764 * 299.99749 * 3 2 1 29 29 H 1.09003 * 109.47177 * 59.99822 * 3 2 1 30 30 H 0.96994 * 120.00681 * 180.02562 * 9 8 6 31 31 H 0.96999 * 119.99975 * 264.99906 * 14 4 2 32 32 H 1.07999 * 125.58484 * 179.86332 * 19 18 17 33 33 H 1.07999 * 126.43647 * 180.25750 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 1.2492 5 1 1.6038 -1.7190 1.2963 6 6 3.5417 -0.8318 1.1876 7 1 4.1517 -0.3095 1.9097 8 6 4.1367 -1.6000 0.2094 9 7 3.4007 -2.3760 -0.5558 10 14 5.9885 -1.5383 -0.0290 11 1 6.5827 -0.5951 0.9520 12 1 6.5596 -2.8932 0.1790 13 1 6.2951 -1.0781 -1.4072 14 7 1.6547 0.0368 2.4422 15 6 0.4376 -0.1446 2.9920 16 8 -0.3413 -0.9385 2.4977 17 6 0.0526 0.6130 4.1853 18 8 0.8150 1.5230 4.8278 19 6 0.1386 2.0092 5.8767 20 6 -1.0778 1.4234 5.9202 21 6 -1.1442 0.5270 4.8405 22 17 -2.4855 -0.4916 4.4197 23 1 -0.3633 0.6202 0.8194 24 1 -0.3633 0.3995 -0.9469 25 1 -0.3633 -1.0197 0.1274 26 1 1.8933 -0.5139 -0.8900 27 1 3.1301 1.4424 0.0005 28 1 1.6767 1.9563 -0.8900 29 1 1.6767 1.9564 0.8900 30 1 3.8194 -2.9166 -1.2437 31 1 2.2756 0.6693 2.8364 32 1 0.5041 2.7513 6.5710 33 1 -1.8538 1.6097 6.6478 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260177272.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:35:04 Heat of formation + Delta-G solvation = -36.045753 kcal Electronic energy + Delta-G solvation = -19078.974353 eV Core-core repulsion = 15939.294537 eV Total energy + Delta-G solvation = -3139.679817 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 271.076 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -42.69563 -38.97374 -36.50884 -35.71188 -32.96805 -32.34837 -32.03845 -29.78878 -27.04632 -26.04957 -23.66514 -22.33706 -21.77161 -20.19937 -18.57337 -18.44630 -16.65332 -16.39583 -15.82073 -15.18967 -14.55198 -14.32498 -13.88795 -13.66620 -13.27414 -13.03608 -12.76569 -12.50542 -12.44230 -12.15809 -11.39683 -11.19428 -11.03382 -10.94188 -10.78598 -10.38231 -10.20222 -9.98401 -9.68481 -9.64212 -9.30996 -9.08872 -8.62538 -8.50440 -7.88154 -6.16491 -4.21006 1.11733 2.12159 2.19516 2.90362 3.23148 3.31897 3.34036 3.70494 3.91871 4.35127 4.67430 4.98576 5.17147 5.20882 5.55866 5.76707 6.02378 6.18127 6.22067 6.31751 6.54999 6.69926 6.77292 6.89676 7.04337 7.26629 7.30276 7.39384 7.57830 7.68430 7.78354 8.04153 8.54722 8.72607 8.96808 9.43633 10.91770 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.026021 B = 0.005577 C = 0.005185 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1075.785042 B = 5019.302233 C = 5399.072570 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.098 4.098 3 C -0.129 4.129 4 C 0.274 3.726 5 H 0.060 0.940 6 C -0.532 4.532 7 H 0.062 0.938 8 C 0.071 3.929 9 N -0.879 5.879 10 Si 0.895 3.105 11 H -0.272 1.272 12 H -0.284 1.284 13 H -0.282 1.282 14 N -0.688 5.688 15 C 0.578 3.422 16 O -0.509 6.509 17 C -0.038 4.038 18 O -0.151 6.151 19 C -0.010 4.010 20 C -0.214 4.214 21 C -0.070 4.070 22 Cl -0.011 7.011 23 H 0.036 0.964 24 H 0.026 0.974 25 H 0.056 0.944 26 H 0.090 0.910 27 H 0.059 0.941 28 H 0.028 0.972 29 H 0.033 0.967 30 H 0.264 0.736 31 H 0.393 0.607 32 H 0.214 0.786 33 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.152 8.974 10.480 15.107 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.118 4.118 3 C -0.186 4.186 4 C 0.172 3.828 5 H 0.077 0.923 6 C -0.571 4.571 7 H 0.080 0.920 8 C -0.133 4.133 9 N -0.516 5.516 10 Si 0.722 3.278 11 H -0.197 1.197 12 H -0.210 1.210 13 H -0.208 1.208 14 N -0.335 5.335 15 C 0.361 3.639 16 O -0.387 6.387 17 C -0.092 4.092 18 O -0.045 6.045 19 C -0.079 4.079 20 C -0.234 4.234 21 C -0.100 4.100 22 Cl 0.018 6.982 23 H 0.055 0.945 24 H 0.045 0.955 25 H 0.075 0.925 26 H 0.108 0.892 27 H 0.078 0.922 28 H 0.047 0.953 29 H 0.052 0.948 30 H 0.074 0.926 31 H 0.226 0.774 32 H 0.230 0.770 33 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -6.484 8.227 9.780 14.331 hybrid contribution 0.950 0.333 0.208 1.028 sum -5.534 8.560 9.988 14.271 Atomic orbital electron populations 1.21888 0.97371 1.01467 0.98367 1.21467 0.92896 0.95425 1.02029 1.21669 1.01534 0.96898 0.98533 1.18924 0.94733 0.90994 0.78108 0.92259 1.21131 0.90284 1.30788 1.14854 0.91980 1.24846 0.98338 0.94311 0.95800 1.69976 1.35553 1.25087 1.20937 0.86497 0.85172 0.77937 0.78172 1.19674 1.20982 1.20781 1.46437 1.13662 1.42827 1.30595 1.16522 0.83938 0.82467 0.80982 1.90907 1.51375 1.35458 1.60917 1.22709 0.91081 0.96694 0.98755 1.84215 1.41194 1.44571 1.34563 1.24232 0.91794 1.00951 0.90952 1.21599 0.99705 1.00857 1.01201 1.21213 0.91400 0.99243 0.98104 1.98372 1.41682 1.65466 1.92657 0.94508 0.95532 0.92460 0.89208 0.92179 0.95299 0.94763 0.92573 0.77399 0.76981 0.82138 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.90 7.67 37.16 0.28 -2.61 16 2 C -0.10 -2.25 2.64 -90.62 -0.24 -2.49 16 3 C -0.13 -2.60 8.79 37.16 0.33 -2.27 16 4 C 0.27 6.63 1.80 -69.08 -0.12 6.50 16 5 H 0.06 1.68 7.52 -51.93 -0.39 1.29 16 6 C -0.53 -13.56 7.65 -34.44 -0.26 -13.82 16 7 H 0.06 1.53 7.73 -52.49 -0.41 1.13 16 8 C 0.07 1.86 5.16 -17.82 -0.09 1.77 16 9 N -0.88 -24.26 12.14 55.43 0.67 -23.58 16 10 Si 0.89 20.23 29.55 -169.99 -5.02 15.21 16 11 H -0.27 -6.03 7.11 56.52 0.40 -5.63 16 12 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 13 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 14 N -0.69 -14.23 4.04 -56.30 -0.23 -14.46 16 15 C 0.58 11.76 6.42 -12.93 -0.08 11.68 16 16 O -0.51 -11.62 12.55 5.18 0.07 -11.56 16 17 C -0.04 -0.65 7.13 -36.81 -0.26 -0.91 16 18 O -0.15 -2.13 10.40 4.75 0.05 -2.08 16 19 C -0.01 -0.10 12.07 29.61 0.36 0.26 16 20 C -0.21 -2.44 10.88 -39.86 -0.43 -2.87 16 21 C -0.07 -1.07 6.76 -39.28 -0.27 -1.34 16 22 Cl -0.01 -0.17 27.84 -51.86 -1.44 -1.61 16 23 H 0.04 0.78 6.28 -51.93 -0.33 0.45 16 24 H 0.03 0.52 8.14 -51.93 -0.42 0.09 16 25 H 0.06 1.33 7.43 -51.93 -0.39 0.95 16 26 H 0.09 2.31 6.78 -51.93 -0.35 1.95 16 27 H 0.06 1.25 7.38 -51.93 -0.38 0.86 16 28 H 0.03 0.53 8.14 -51.93 -0.42 0.10 16 29 H 0.03 0.64 7.47 -51.93 -0.39 0.25 16 30 H 0.26 6.94 8.31 -40.82 -0.34 6.60 16 31 H 0.39 7.34 8.28 -40.82 -0.34 7.00 16 32 H 0.21 1.10 8.06 -52.49 -0.42 0.67 16 33 H 0.16 1.36 8.06 -52.49 -0.42 0.93 16 LS Contribution 294.39 15.07 4.44 4.44 Total: -1.00 -29.05 294.39 -6.06 -35.11 By element: Atomic # 1 Polarization: 8.44 SS G_CDS: -3.80 Total: 4.64 kcal Atomic # 6 Polarization: -5.32 SS G_CDS: -0.79 Total: -6.11 kcal Atomic # 7 Polarization: -38.49 SS G_CDS: 0.45 Total: -38.04 kcal Atomic # 8 Polarization: -13.75 SS G_CDS: 0.11 Total: -13.64 kcal Atomic # 14 Polarization: 20.23 SS G_CDS: -5.02 Total: 15.21 kcal Atomic # 17 Polarization: -0.17 SS G_CDS: -1.44 Total: -1.61 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -29.05 -6.06 -35.11 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260177272.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.936 kcal (2) G-P(sol) polarization free energy of solvation -29.050 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.986 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.060 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.110 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.046 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds