Wall clock time and date at job start Mon Mar 30 2020 07:08:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.38299 * 119.84767 * 2 1 4 4 C 1.38094 * 120.16767 * 180.02562 * 3 2 1 5 5 Cl 1.73605 * 120.07089 * 179.97438 * 4 3 2 6 6 C 1.39795 * 119.85789 * 0.27573 * 4 3 2 7 7 C 1.47657 * 120.14593 * 179.70273 * 6 4 3 8 8 O 1.21596 * 120.00197 * 317.49034 * 7 6 4 9 9 N 1.34780 * 120.00146 * 137.49425 * 7 6 4 10 10 C 1.46500 * 120.00309 * 185.46062 * 9 7 6 11 11 C 1.36881 * 119.99525 * 5.45928 * 9 7 6 12 12 H 1.07994 * 120.00486 * 319.32004 * 11 9 7 13 13 C 1.39043 * 119.99711 * 139.32272 * 11 9 7 14 14 N 1.31366 * 120.00217 * 162.41445 * 13 11 9 15 15 Si 1.86803 * 120.00021 * 342.40710 * 13 11 9 16 16 H 1.48497 * 109.46732 * 92.64380 * 15 13 11 17 17 H 1.48499 * 109.47281 * 212.64167 * 15 13 11 18 18 H 1.48497 * 109.47053 * 332.64617 * 15 13 11 19 19 C 1.39633 * 119.70017 * 359.44295 * 6 4 3 20 20 C 1.38143 * 119.83313 * 0.56016 * 19 6 4 21 21 F 1.35105 * 119.93341 * 179.69629 * 20 19 6 22 22 H 1.09006 * 109.46458 * 90.00289 * 1 2 3 23 23 H 1.08995 * 109.47304 * 210.00264 * 1 2 3 24 24 H 1.09004 * 109.47563 * 330.01192 * 1 2 3 25 25 H 1.08000 * 119.91633 * 0.03568 * 3 2 1 26 26 H 1.09001 * 109.46964 * 84.56094 * 10 9 7 27 27 H 1.09000 * 109.47026 * 204.55950 * 10 9 7 28 28 H 1.08998 * 109.46635 * 324.56353 * 10 9 7 29 29 H 0.96996 * 120.00484 * 179.97438 * 14 13 11 30 30 H 1.08000 * 120.08232 * 180.29474 * 19 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1953 1.1995 0.0000 4 6 3.5762 1.2073 -0.0005 5 17 4.4376 2.7145 -0.0012 6 6 4.2789 -0.0012 -0.0069 7 6 5.7555 -0.0004 -0.0141 8 8 6.3595 0.7780 -0.7268 9 7 6.4337 -0.8624 0.7691 10 6 7.8941 -0.7823 0.8531 11 6 5.7580 -1.8126 1.4861 12 1 4.8290 -1.5605 1.9756 13 6 6.2677 -3.1025 1.5841 14 7 5.8342 -3.9104 2.5249 15 14 7.5688 -3.6868 0.3778 16 1 8.9179 -3.4376 0.9458 17 1 7.3969 -5.1409 0.1302 18 1 7.4258 -2.9465 -0.9015 19 6 3.5782 -1.2090 -0.0009 20 6 2.1968 -1.2021 -0.0004 21 9 1.5168 -2.3695 -0.0008 22 1 -0.3632 -0.0001 -1.0278 23 1 -0.3633 -0.8899 0.5138 24 1 -0.3634 0.8901 0.5137 25 1 1.6514 2.1326 0.0006 26 1 8.1749 -0.0372 1.5975 27 1 8.2952 -1.7538 1.1422 28 1 8.2987 -0.4964 -0.1178 29 1 6.1895 -4.8103 2.5931 30 1 4.1149 -2.1462 -0.0010 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260323165.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:08:50 Heat of formation + Delta-G solvation = -49.003234 kcal Electronic energy + Delta-G solvation = -18749.533310 eV Core-core repulsion = 15485.831310 eV Total energy + Delta-G solvation = -3263.702000 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 271.052 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -48.53799 -39.61105 -37.87477 -36.03060 -34.98560 -32.65302 -32.07006 -30.04179 -27.94047 -26.14842 -24.89074 -22.60428 -21.76482 -19.52146 -18.04609 -16.76127 -16.38737 -15.87358 -15.50771 -15.36860 -15.02042 -14.43858 -13.91872 -13.52751 -13.32415 -13.06692 -12.76567 -12.65451 -12.60584 -12.50014 -12.03512 -11.83539 -11.50508 -11.11380 -10.94981 -10.71458 -10.49935 -10.34481 -10.08526 -9.35289 -8.80611 -8.56602 -8.15179 -7.87215 -6.60556 -4.24676 1.12357 1.42039 2.50369 2.96430 3.13407 3.21485 3.37305 3.93413 4.01575 4.23317 4.51875 4.76568 4.92711 5.06596 5.28442 5.47107 5.60189 5.68225 5.91074 5.99452 6.02704 6.18029 6.21128 6.32392 6.43334 6.46208 6.59405 7.08037 7.20769 7.91076 8.09637 8.76903 9.14992 9.49043 10.48129 Molecular weight = 271.05amu Principal moments of inertia in cm(-1) A = 0.017653 B = 0.008915 C = 0.006355 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1585.709400 B = 3139.861818 C = 4405.108070 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.106 4.106 3 C -0.104 4.104 4 C -0.010 4.010 5 Cl -0.052 7.052 6 C -0.063 4.063 7 C 0.516 3.484 8 O -0.573 6.573 9 N -0.456 5.456 10 C 0.073 3.927 11 C -0.355 4.355 12 H 0.108 0.892 13 C 0.067 3.933 14 N -0.852 5.852 15 Si 0.880 3.120 16 H -0.271 1.271 17 H -0.286 1.286 18 H -0.259 1.259 19 C -0.077 4.077 20 C 0.084 3.916 21 F -0.136 7.136 22 H 0.073 0.927 23 H 0.071 0.929 24 H 0.071 0.929 25 H 0.139 0.861 26 H 0.051 0.949 27 H 0.064 0.936 28 H 0.063 0.937 29 H 0.278 0.722 30 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.028 5.626 -3.520 9.666 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.107 4.107 3 C -0.123 4.123 4 C -0.038 4.038 5 Cl -0.023 7.023 6 C -0.067 4.067 7 C 0.305 3.695 8 O -0.457 6.457 9 N -0.176 5.176 10 C -0.069 4.069 11 C -0.482 4.482 12 H 0.125 0.875 13 C -0.141 4.141 14 N -0.486 5.486 15 Si 0.707 3.293 16 H -0.198 1.198 17 H -0.213 1.213 18 H -0.183 1.183 19 C -0.096 4.096 20 C 0.065 3.935 21 F -0.114 7.114 22 H 0.092 0.908 23 H 0.090 0.910 24 H 0.090 0.910 25 H 0.157 0.843 26 H 0.070 0.930 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.089 0.911 30 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges -6.626 5.885 -3.742 9.620 hybrid contribution 0.656 -0.678 -0.240 0.973 sum -5.971 5.206 -3.982 8.867 Atomic orbital electron populations 1.20707 0.89926 1.03348 1.02692 1.19850 0.96890 0.91367 1.02606 1.20541 0.91354 0.97818 1.02554 1.20911 0.91902 0.87216 1.03742 1.98364 1.77249 1.30091 1.96604 1.19628 0.95060 0.91085 1.00956 1.17918 0.86060 0.84162 0.81406 1.90692 1.69285 1.43161 1.42517 1.43487 1.05064 1.29799 1.39265 1.21845 0.82400 1.01274 1.01398 1.19172 1.09664 0.89059 1.30310 0.87461 1.25393 0.97360 0.95737 0.95650 1.69698 1.42174 1.08299 1.28438 0.86902 0.81326 0.78213 0.82899 1.19817 1.21260 1.18313 1.21818 0.91539 1.00508 0.95730 1.17473 0.89923 0.80984 1.05149 1.91476 1.79822 1.46111 1.94008 0.90819 0.90976 0.91001 0.84301 0.92997 0.91797 0.91796 0.91130 0.81303 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.22 9.82 36.00 0.35 -0.87 16 2 C -0.11 -1.58 5.89 -104.47 -0.62 -2.20 16 3 C -0.10 -1.57 9.46 -39.61 -0.37 -1.94 16 4 C -0.01 -0.18 6.34 -39.05 -0.25 -0.42 16 5 Cl -0.05 -0.94 26.92 -51.86 -1.40 -2.33 16 6 C -0.06 -1.33 5.28 -104.95 -0.55 -1.88 16 7 C 0.52 12.14 6.92 -12.41 -0.09 12.05 16 8 O -0.57 -14.20 15.09 5.28 0.08 -14.12 16 9 N -0.46 -10.90 2.53 -123.34 -0.31 -11.22 16 10 C 0.07 1.58 8.97 59.85 0.54 2.12 16 11 C -0.36 -8.91 6.90 -15.00 -0.10 -9.01 16 12 H 0.11 2.86 6.71 -52.49 -0.35 2.50 16 13 C 0.07 1.70 5.33 -17.45 -0.09 1.61 16 14 N -0.85 -22.56 13.95 55.50 0.77 -21.78 16 15 Si 0.88 19.70 24.96 -169.99 -4.24 15.45 16 16 H -0.27 -5.82 6.63 56.52 0.37 -5.45 16 17 H -0.29 -6.37 7.11 56.52 0.40 -5.97 16 18 H -0.26 -5.93 7.11 56.52 0.40 -5.53 16 19 C -0.08 -1.54 7.79 -39.10 -0.30 -1.85 16 20 C 0.08 1.49 7.23 -39.48 -0.29 1.20 16 21 F -0.14 -2.38 16.46 2.25 0.04 -2.34 16 22 H 0.07 0.72 8.14 -51.93 -0.42 0.30 16 23 H 0.07 0.81 7.63 -51.93 -0.40 0.41 16 24 H 0.07 0.66 8.08 -51.93 -0.42 0.24 16 25 H 0.14 1.66 8.06 -52.49 -0.42 1.23 16 26 H 0.05 1.03 8.14 -51.93 -0.42 0.61 16 27 H 0.06 1.37 3.55 -51.93 -0.18 1.18 16 28 H 0.06 1.33 7.52 -51.93 -0.39 0.94 16 29 H 0.28 6.88 8.31 -40.82 -0.34 6.54 16 30 H 0.17 3.68 6.29 -52.49 -0.33 3.35 16 LS Contribution 273.12 15.07 4.12 4.12 Total: -1.00 -27.84 273.12 -5.22 -33.06 By element: Atomic # 1 Polarization: 2.86 SS G_CDS: -2.50 Total: 0.35 kcal Atomic # 6 Polarization: 0.58 SS G_CDS: -1.77 Total: -1.19 kcal Atomic # 7 Polarization: -33.46 SS G_CDS: 0.46 Total: -33.00 kcal Atomic # 8 Polarization: -14.20 SS G_CDS: 0.08 Total: -14.12 kcal Atomic # 9 Polarization: -2.38 SS G_CDS: 0.04 Total: -2.34 kcal Atomic # 14 Polarization: 19.70 SS G_CDS: -4.24 Total: 15.45 kcal Atomic # 17 Polarization: -0.94 SS G_CDS: -1.40 Total: -2.33 kcal Total LS contribution 4.12 Total: 4.12 kcal Total: -27.84 -5.22 -33.06 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260323165.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.940 kcal (2) G-P(sol) polarization free energy of solvation -27.841 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.781 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.222 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.063 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.003 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds