Wall clock time and date at job start Mon Mar 30 2020 07:45:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46903 * 1 3 3 C 1.46900 * 110.99453 * 2 1 4 4 C 1.50692 * 109.47160 * 66.05316 * 3 2 1 5 5 H 1.07997 * 120.00273 * 359.97438 * 4 3 2 6 6 C 1.37881 * 120.00343 * 179.97438 * 4 3 2 7 7 N 1.31520 * 119.99609 * 359.97438 * 6 4 3 8 8 Si 1.86794 * 120.00565 * 179.97438 * 6 4 3 9 9 H 1.48510 * 109.47163 * 59.99598 * 8 6 4 10 10 H 1.48500 * 109.47565 * 179.97438 * 8 6 4 11 11 H 1.48500 * 109.46860 * 299.99960 * 8 6 4 12 12 C 1.38992 * 110.99559 * 236.04909 * 2 1 3 13 13 C 1.39006 * 120.17382 * 64.20646 * 12 2 1 14 14 F 1.35096 * 119.99227 * 0.03894 * 13 12 2 15 15 C 1.38369 * 120.00923 * 180.29642 * 13 12 2 16 16 F 1.35102 * 119.81240 * 179.70193 * 15 13 12 17 17 C 1.38920 * 120.36767 * 359.72139 * 15 13 12 18 18 C 1.37590 * 120.34818 * 0.02562 * 17 15 13 19 19 C 1.39913 * 119.97748 * 359.97438 * 18 17 15 20 20 C 1.47174 * 120.17768 * 180.02562 * 19 18 17 21 21 O 1.21544 * 119.99727 * 179.72911 * 20 19 18 22 22 O 1.34784 * 120.00203 * 0.02562 * 20 19 18 23 23 H 1.09000 * 109.46832 * 183.95348 * 1 2 3 24 24 H 1.09003 * 109.47247 * 303.94848 * 1 2 3 25 25 H 1.08996 * 109.47691 * 63.94976 * 1 2 3 26 26 H 1.09002 * 109.46728 * 186.04775 * 3 2 1 27 27 H 1.09001 * 109.47452 * 306.04409 * 3 2 1 28 28 H 0.97000 * 120.00157 * 180.02562 * 7 6 4 29 29 H 1.07995 * 119.82674 * 179.97438 * 17 15 13 30 30 H 1.07997 * 120.01311 * 179.97438 * 18 17 15 31 31 H 0.96706 * 116.99765 * 359.72197 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9953 1.3715 0.0000 4 6 1.6369 2.0471 1.2984 5 1 1.0741 1.5114 2.0485 6 6 2.0276 3.3491 1.5290 7 7 2.7135 4.0013 0.6158 8 14 1.5827 4.1868 3.1382 9 1 2.1736 3.4292 4.2706 10 1 2.1159 5.5728 3.1388 11 1 0.1054 4.2242 3.2849 12 6 1.9670 -0.7247 -1.0764 13 6 1.7292 -0.2961 -2.3772 14 9 1.0130 0.8280 -2.5975 15 6 2.2214 -1.0235 -3.4464 16 9 1.9827 -0.6066 -4.7091 17 6 2.9591 -2.1803 -3.2287 18 6 3.2079 -2.6153 -1.9473 19 6 2.7172 -1.8910 -0.8555 20 6 2.9811 -2.3520 0.5171 21 8 2.5574 -1.7175 1.4632 22 8 3.6977 -3.4744 0.7249 23 1 -0.3633 -1.0252 0.0709 24 1 -0.3634 0.5739 0.8525 25 1 -0.3634 0.4513 -0.9232 26 1 3.0796 1.3445 -0.1083 27 1 1.5610 1.9274 -0.8309 28 1 2.9886 4.9172 0.7780 29 1 3.3387 -2.7416 -4.0696 30 1 3.7817 -3.5156 -1.7843 31 1 4.0137 -3.9450 -0.0586 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000704529648.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:45:41 Heat of formation + Delta-G solvation = -124.692332 kcal Electronic energy + Delta-G solvation = -21139.883253 eV Core-core repulsion = 17444.562752 eV Total energy + Delta-G solvation = -3695.320501 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 271.081 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -49.45582 -48.49032 -40.30778 -38.36862 -36.53216 -35.81067 -32.61332 -30.72786 -29.97114 -27.30561 -25.44089 -24.10859 -22.96479 -21.56725 -20.97244 -18.90825 -17.77921 -17.15571 -16.59151 -16.36749 -16.06847 -15.54894 -15.27558 -15.00614 -14.85287 -14.58126 -14.35664 -13.71688 -13.65570 -13.26666 -13.01080 -12.65203 -12.12629 -12.01987 -11.80159 -11.31171 -11.15016 -10.97446 -10.75615 -10.58021 -10.04446 -9.94778 -9.34024 -8.86967 -8.76747 -8.45306 -7.55430 -6.03104 -4.04220 0.42511 0.89536 2.60330 3.36463 3.38154 3.39564 3.43800 3.53666 3.70117 4.25006 4.33441 4.45434 4.48391 4.53159 4.74690 5.31236 5.34269 5.44556 5.68615 5.73010 5.83099 5.97973 6.17271 6.50395 6.62785 7.11578 7.17514 7.50193 7.74496 7.84801 8.03367 8.06715 8.43546 9.01294 9.58799 11.07978 Molecular weight = 271.08amu Principal moments of inertia in cm(-1) A = 0.018620 B = 0.007119 C = 0.005648 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1503.386628 B = 3932.219662 C = 4956.034761 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 N -0.492 5.492 3 C 0.192 3.808 4 C -0.504 4.504 5 H 0.068 0.932 6 C 0.056 3.944 7 N -0.899 5.899 8 Si 0.903 3.097 9 H -0.275 1.275 10 H -0.288 1.288 11 H -0.276 1.276 12 C 0.181 3.819 13 C 0.027 3.973 14 F -0.113 7.113 15 C 0.099 3.901 16 F -0.126 7.126 17 C -0.149 4.149 18 C -0.069 4.069 19 C -0.154 4.154 20 C 0.523 3.477 21 O -0.395 6.395 22 O -0.514 6.514 23 H 0.049 0.951 24 H 0.090 0.910 25 H 0.026 0.974 26 H 0.029 0.971 27 H 0.012 0.988 28 H 0.262 0.738 29 H 0.150 0.850 30 H 0.145 0.855 31 H 0.403 0.597 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.894 -15.282 -8.904 17.709 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 N -0.213 5.213 3 C 0.070 3.930 4 C -0.543 4.543 5 H 0.086 0.914 6 C -0.146 4.146 7 N -0.538 5.538 8 Si 0.730 3.270 9 H -0.200 1.200 10 H -0.214 1.214 11 H -0.202 1.202 12 C 0.083 3.917 13 C 0.004 3.996 14 F -0.091 7.091 15 C 0.078 3.922 16 F -0.105 7.105 17 C -0.168 4.168 18 C -0.088 4.088 19 C -0.157 4.157 20 C 0.360 3.640 21 O -0.273 6.273 22 O -0.325 6.325 23 H 0.068 0.932 24 H 0.109 0.891 25 H 0.044 0.956 26 H 0.047 0.953 27 H 0.029 0.971 28 H 0.072 0.928 29 H 0.168 0.832 30 H 0.163 0.837 31 H 0.259 0.741 Dipole moment (debyes) X Y Z Total from point charges 0.748 -14.741 -7.449 16.533 hybrid contribution -0.313 1.043 -0.991 1.473 sum 0.435 -13.697 -8.440 16.095 Atomic orbital electron populations 1.22322 0.85797 1.00525 1.02172 1.59835 1.08229 1.18850 1.34376 1.19984 0.95452 0.79210 0.98331 1.21012 1.35231 0.96747 1.01276 0.91408 1.24979 0.95214 0.97215 0.97160 1.69957 1.38145 1.11584 1.34134 0.86483 0.78717 0.78172 0.83607 1.20030 1.21357 1.20196 1.19238 0.92281 0.92329 0.87854 1.18896 0.99764 0.87031 0.93953 1.91559 1.74882 1.47559 1.95116 1.17998 1.00171 0.95501 0.78509 1.91536 1.92523 1.89781 1.36644 1.20798 1.01377 0.95970 0.98627 1.21027 0.97822 0.98987 0.90975 1.20336 1.03644 0.97282 0.94439 1.19844 0.77105 0.78765 0.88310 1.91079 1.43154 1.48869 1.44227 1.84693 1.67493 1.39072 1.41230 0.93193 0.89113 0.95554 0.95275 0.97052 0.92795 0.83223 0.83746 0.74090 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.77 9.12 60.07 0.55 1.31 16 2 N -0.49 -11.07 2.64 -180.03 -0.48 -11.54 16 3 C 0.19 5.16 4.23 -4.98 -0.02 5.14 16 4 C -0.50 -14.56 8.46 -34.44 -0.29 -14.85 16 5 H 0.07 1.95 7.12 -52.49 -0.37 1.58 16 6 C 0.06 1.62 5.46 -17.82 -0.10 1.52 16 7 N -0.90 -27.18 13.29 55.43 0.74 -26.44 16 8 Si 0.90 22.24 29.54 -169.99 -5.02 17.22 16 9 H -0.27 -6.75 7.11 56.52 0.40 -6.34 16 10 H -0.29 -6.98 7.11 56.52 0.40 -6.58 16 11 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 12 C 0.18 3.39 4.68 -83.51 -0.39 3.00 16 13 C 0.03 0.48 6.69 -39.25 -0.26 0.22 16 14 F -0.11 -2.31 13.41 2.25 0.03 -2.28 16 15 C 0.10 1.41 7.30 -39.28 -0.29 1.13 16 16 F -0.13 -1.84 17.17 2.25 0.04 -1.80 16 17 C -0.15 -1.50 10.00 -39.57 -0.40 -1.90 16 18 C -0.07 -0.65 9.51 -39.19 -0.37 -1.03 16 19 C -0.15 -2.27 5.89 -104.82 -0.62 -2.89 16 20 C 0.52 8.52 8.33 34.36 0.29 8.81 16 21 O -0.39 -8.66 15.86 -19.30 -0.31 -8.97 16 22 O -0.51 -6.07 13.48 -40.72 -0.55 -6.62 16 23 H 0.05 0.87 8.14 -51.93 -0.42 0.45 16 24 H 0.09 1.93 6.76 -51.93 -0.35 1.58 16 25 H 0.03 0.52 6.37 -51.93 -0.33 0.19 16 26 H 0.03 0.85 8.06 -51.93 -0.42 0.43 16 27 H 0.01 0.33 6.33 -51.93 -0.33 0.00 16 28 H 0.26 7.51 8.31 -40.82 -0.34 7.17 16 29 H 0.15 0.98 8.06 -52.49 -0.42 0.55 16 30 H 0.14 0.57 6.34 -52.49 -0.33 0.24 16 31 H 0.40 1.95 6.87 45.56 0.31 2.26 16 LS Contribution 278.73 15.07 4.20 4.20 Total: -1.00 -35.43 278.73 -5.05 -40.48 By element: Atomic # 1 Polarization: -2.91 SS G_CDS: -1.80 Total: -4.71 kcal Atomic # 6 Polarization: 2.37 SS G_CDS: -1.90 Total: 0.47 kcal Atomic # 7 Polarization: -38.24 SS G_CDS: 0.26 Total: -37.98 kcal Atomic # 8 Polarization: -14.74 SS G_CDS: -0.86 Total: -15.59 kcal Atomic # 9 Polarization: -4.14 SS G_CDS: 0.07 Total: -4.08 kcal Atomic # 14 Polarization: 22.24 SS G_CDS: -5.02 Total: 17.22 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -35.43 -5.05 -40.48 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000704529648.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.211 kcal (2) G-P(sol) polarization free energy of solvation -35.432 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.643 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.049 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.481 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.692 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds