Wall clock time and date at job start Mon Mar 30 2020 07:37:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 H 1.08995 * 109.47499 * 2 1 4 4 Cl 1.80302 * 109.46960 * 240.00493 * 2 1 3 5 5 C 1.50700 * 109.47169 * 120.01025 * 2 1 3 6 6 O 1.21341 * 120.00415 * 94.99652 * 5 2 1 7 7 C 1.46548 * 119.99421 * 274.99549 * 5 2 1 8 8 C 1.39722 * 120.57658 * 5.47393 * 7 5 2 9 9 C 1.37956 * 120.03568 * 180.26836 * 8 7 5 10 10 C 1.38857 * 121.29113 * 359.44994 * 9 8 7 11 11 Cl 1.73600 * 119.40066 * 180.25154 * 10 9 8 12 12 C 1.37675 * 121.20102 * 0.27892 * 10 9 8 13 13 C 1.40773 * 119.84355 * 359.97438 * 12 10 9 14 14 C 1.40749 * 120.60927 * 179.97438 * 13 12 10 15 15 H 1.07997 * 120.00055 * 212.30112 * 14 13 12 16 16 C 1.40386 * 119.99695 * 32.30825 * 14 13 12 17 17 N 1.30564 * 120.00028 * 9.18703 * 16 14 13 18 18 Si 1.86796 * 119.99643 * 189.18322 * 16 14 13 19 19 H 1.48498 * 109.47519 * 0.02562 * 18 16 14 20 20 H 1.48506 * 109.46906 * 119.99864 * 18 16 14 21 21 H 1.48503 * 109.47383 * 239.99908 * 18 16 14 22 22 H 1.09005 * 109.46999 * 299.99768 * 1 2 3 23 23 H 1.09002 * 109.47576 * 59.99640 * 1 2 3 24 24 H 1.08996 * 109.47575 * 179.97438 * 1 2 3 25 25 H 1.08002 * 119.98154 * 0.02562 * 8 7 5 26 26 H 1.07995 * 119.35515 * 179.72409 * 9 8 7 27 27 H 1.08000 * 120.08086 * 180.02562 * 12 10 9 28 28 H 0.97006 * 119.99462 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 17 2.1309 -0.8498 -1.4722 5 6 2.0323 -0.7106 1.2303 6 8 2.3208 -1.8880 1.1757 7 6 2.1723 0.0204 2.4927 8 6 1.7376 1.3439 2.5996 9 6 1.8799 2.0233 3.7918 10 6 2.4412 1.4144 4.9064 11 17 2.5906 2.3133 6.3840 12 6 2.8819 0.1109 4.8608 13 6 2.7653 -0.6267 3.6675 14 6 3.2110 -1.9602 3.6028 15 1 3.6102 -2.3519 2.6789 16 6 3.1365 -2.7811 4.7392 17 7 2.4940 -2.3715 5.7994 18 14 3.9565 -4.4594 4.7342 19 1 4.6149 -4.6849 3.4224 20 1 4.9739 -4.5164 5.8144 21 1 2.9331 -5.5111 4.9622 22 1 -0.3633 0.5138 0.8900 23 1 -0.3634 0.5139 -0.8899 24 1 -0.3634 -1.0276 -0.0005 25 1 1.2935 1.8367 1.7473 26 1 1.5441 3.0475 3.8609 27 1 3.3152 -0.3450 5.7388 28 1 2.4429 -2.9386 6.5848 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000396099236.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:37:03 Heat of formation + Delta-G solvation = -48.930209 kcal Electronic energy + Delta-G solvation = -16249.448953 eV Core-core repulsion = 13316.367832 eV Total energy + Delta-G solvation = -2933.081121 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 272.011 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -38.79468 -36.99750 -35.59072 -35.38077 -34.08403 -32.30621 -29.99453 -29.46513 -26.04450 -24.26301 -22.00793 -21.13527 -18.70024 -17.79834 -15.98619 -15.65978 -15.05735 -14.70690 -14.27560 -13.97282 -13.53013 -13.03054 -12.70874 -12.46265 -12.04118 -11.93404 -11.72091 -11.57116 -11.35849 -11.18538 -10.94068 -10.51262 -10.46665 -10.33424 -10.22674 -10.10956 -9.75209 -9.54143 -8.45052 -7.78724 -7.55580 -7.13594 -4.74791 1.74886 2.46349 2.56442 2.95500 3.01412 3.04568 3.11655 3.48500 3.74354 4.31139 4.67340 5.09758 5.22713 5.32052 5.72807 5.77367 5.83253 6.11306 6.21999 6.42152 6.64905 6.69423 6.83540 7.00422 7.30927 7.51994 7.60549 7.73087 8.24799 8.42161 8.48868 8.71068 9.76816 Molecular weight = 272.01amu Principal moments of inertia in cm(-1) A = 0.013009 B = 0.008578 C = 0.005414 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2151.813610 B = 3263.353954 C = 5170.846398 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.045 4.045 3 H 0.114 0.886 4 Cl -0.174 7.174 5 C 0.386 3.614 6 O -0.449 6.449 7 C -0.298 4.298 8 C -0.030 4.030 9 C -0.250 4.250 10 C 0.013 3.987 11 Cl -0.120 7.120 12 C -0.145 4.145 13 C 0.147 3.853 14 C -0.391 4.391 15 H 0.112 0.888 16 C 0.066 3.934 17 N -0.767 5.767 18 Si 0.922 3.078 19 H -0.252 1.252 20 H -0.269 1.269 21 H -0.269 1.269 22 H 0.080 0.920 23 H 0.068 0.932 24 H 0.070 0.930 25 H 0.104 0.896 26 H 0.103 0.897 27 H 0.132 0.868 28 H 0.290 0.710 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.721 3.983 -3.802 5.769 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.089 4.089 3 H 0.131 0.869 4 Cl -0.147 7.147 5 C 0.267 3.733 6 O -0.327 6.327 7 C -0.301 4.301 8 C -0.049 4.049 9 C -0.270 4.270 10 C -0.014 4.014 11 Cl -0.091 7.091 12 C -0.164 4.164 13 C 0.143 3.857 14 C -0.418 4.418 15 H 0.130 0.870 16 C -0.156 4.156 17 N -0.390 5.390 18 Si 0.745 3.255 19 H -0.176 1.176 20 H -0.194 1.194 21 H -0.194 1.194 22 H 0.099 0.901 23 H 0.087 0.913 24 H 0.089 0.911 25 H 0.122 0.878 26 H 0.121 0.879 27 H 0.149 0.851 28 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -1.594 3.305 -3.581 5.127 hybrid contribution 0.148 -0.357 0.236 0.453 sum -1.446 2.948 -3.345 4.688 Atomic orbital electron populations 1.21989 0.91375 1.03949 1.03242 1.24726 0.98174 0.99379 0.86664 0.86851 1.98697 1.90255 1.82125 1.43671 1.21585 0.76106 0.88324 0.87255 1.90493 1.40036 1.16722 1.85452 1.20735 1.16823 0.96249 0.96297 1.20725 0.95484 0.93060 0.95587 1.20009 1.13801 1.00101 0.93091 1.20821 1.02250 0.92676 0.85607 1.98274 1.96911 1.76241 1.37715 1.21345 1.04246 0.90746 1.00100 1.18443 0.86394 0.92401 0.88487 1.20360 1.28876 0.94741 0.97776 0.87049 1.26324 0.93281 1.02001 0.94033 1.69673 1.27931 1.37855 1.03499 0.85996 0.79645 0.79743 0.80136 1.17552 1.19373 1.19385 0.90102 0.91272 0.91139 0.87772 0.87896 0.85063 0.89840 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.03 9.23 37.15 0.34 -1.69 15 2 C -0.04 -0.73 2.95 -27.89 -0.08 -0.81 15 3 H 0.11 1.61 7.00 -51.93 -0.36 1.24 15 4 Cl -0.17 -2.92 28.00 -51.86 -1.45 -4.37 15 5 C 0.39 8.10 6.23 -30.96 -0.19 7.91 15 6 O -0.45 -10.81 13.68 5.50 0.08 -10.73 15 7 C -0.30 -6.61 6.06 -102.60 -0.62 -7.24 15 8 C -0.03 -0.58 9.09 -39.13 -0.36 -0.93 15 9 C -0.25 -5.00 9.74 -39.46 -0.38 -5.38 15 10 C 0.01 0.29 6.30 -39.56 -0.25 0.04 15 11 Cl -0.12 -2.28 28.91 -51.86 -1.50 -3.78 15 12 C -0.14 -3.45 8.40 -38.83 -0.33 -3.78 15 13 C 0.15 3.65 5.68 -104.60 -0.59 3.06 15 14 C -0.39 -9.86 7.87 -37.83 -0.30 -10.16 15 15 H 0.11 2.89 5.95 -52.49 -0.31 2.58 15 16 C 0.07 1.55 5.27 -17.28 -0.09 1.46 15 17 N -0.77 -18.27 11.02 55.57 0.61 -17.65 15 18 Si 0.92 18.02 29.57 -169.99 -5.03 13.00 15 19 H -0.25 -5.04 7.11 56.52 0.40 -4.64 15 20 H -0.27 -5.05 7.11 56.52 0.40 -4.65 15 21 H -0.27 -5.19 7.11 56.52 0.40 -4.79 15 22 H 0.08 1.06 7.53 -51.93 -0.39 0.67 15 23 H 0.07 0.77 8.14 -51.93 -0.42 0.35 15 24 H 0.07 1.03 8.14 -51.93 -0.42 0.61 15 25 H 0.10 1.62 6.22 -52.49 -0.33 1.29 15 26 H 0.10 1.83 8.06 -52.49 -0.42 1.41 15 27 H 0.13 3.24 6.47 -52.49 -0.34 2.90 15 28 H 0.29 6.22 8.29 -40.82 -0.34 5.88 15 LS Contribution 275.14 15.07 4.15 4.15 Total: -1.00 -25.94 275.14 -8.13 -34.07 By element: Atomic # 1 Polarization: 4.99 SS G_CDS: -2.14 Total: 2.85 kcal Atomic # 6 Polarization: -14.68 SS G_CDS: -2.85 Total: -17.53 kcal Atomic # 7 Polarization: -18.27 SS G_CDS: 0.61 Total: -17.65 kcal Atomic # 8 Polarization: -10.81 SS G_CDS: 0.08 Total: -10.73 kcal Atomic # 14 Polarization: 18.02 SS G_CDS: -5.03 Total: 13.00 kcal Atomic # 17 Polarization: -5.20 SS G_CDS: -2.95 Total: -8.15 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -25.94 -8.13 -34.07 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000396099236.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.856 kcal (2) G-P(sol) polarization free energy of solvation -25.943 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.799 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.131 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.074 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.930 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds