Wall clock time and date at job start Mon Mar 30 2020 07:20:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 H 1.09007 * 109.46953 * 2 1 4 4 C 1.52991 * 109.47272 * 240.00162 * 2 1 3 5 5 C 1.50696 * 109.47344 * 174.99719 * 4 2 1 6 6 H 1.08000 * 120.00004 * 0.02562 * 5 4 2 7 7 C 1.37885 * 120.00359 * 179.97438 * 5 4 2 8 8 N 1.31510 * 119.99568 * 0.02562 * 7 5 4 9 9 Si 1.86797 * 120.00213 * 179.97438 * 7 5 4 10 10 H 1.48506 * 109.46544 * 60.00955 * 9 7 5 11 11 H 1.48496 * 109.47174 * 180.02562 * 9 7 5 12 12 H 1.48493 * 109.47421 * 300.00749 * 9 7 5 13 13 O 1.42901 * 109.47334 * 119.99834 * 2 1 3 14 14 C 1.35928 * 116.99801 * 275.05472 * 13 2 1 15 15 C 1.38714 * 120.05445 * 5.47425 * 14 13 2 16 16 C 1.38158 * 119.97957 * 180.02562 * 15 14 13 17 17 C 1.38259 * 120.09047 * 0.02562 * 16 15 14 18 18 C 1.38365 * 120.10319 * 359.97438 * 17 16 15 19 19 Cl 1.73609 * 119.98843 * 180.02562 * 18 17 16 20 20 C 1.38362 * 120.01693 * 0.27677 * 18 17 16 21 21 Cl 1.73599 * 120.04224 * 179.72225 * 20 18 17 22 22 H 1.09004 * 109.47036 * 300.00122 * 1 2 3 23 23 H 1.08998 * 109.46933 * 60.00174 * 1 2 3 24 24 H 1.08994 * 109.46690 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.47393 * 294.99958 * 4 2 1 26 26 H 1.09002 * 109.47454 * 54.99464 * 4 2 1 27 27 H 0.97001 * 120.00496 * 179.97438 * 8 7 5 28 28 H 1.07994 * 120.01622 * 0.02562 * 15 14 13 29 29 H 1.07998 * 119.95763 * 179.97438 * 16 15 14 30 30 H 1.07999 * 119.95139 * 179.97438 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0400 -0.7212 -1.2492 5 6 3.5419 -0.6148 -1.3127 6 1 4.0790 -0.0860 -0.5392 7 6 4.2305 -1.1934 -2.3578 8 7 3.5765 -1.8377 -3.2995 9 14 6.0921 -1.0609 -2.4369 10 1 6.6846 -1.6861 -1.2272 11 1 6.5871 -1.7609 -3.6493 12 1 6.4844 0.3700 -2.4972 13 8 2.0064 -0.6736 1.1668 14 6 2.1115 0.0626 2.3046 15 6 1.6576 1.3731 2.3285 16 6 1.7657 2.1201 3.4857 17 6 2.3263 1.5634 4.6203 18 6 2.7802 0.2565 4.6005 19 17 3.4831 -0.4397 6.0271 20 6 2.6789 -0.4939 3.4424 21 17 3.2548 -2.1313 3.4147 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3632 -1.0276 0.0005 25 1 1.7517 -1.7714 -1.2056 26 1 1.6054 -0.2617 -2.1369 27 1 4.0608 -2.2444 -4.0349 28 1 1.2198 1.8095 1.4430 29 1 1.4125 3.1406 3.5038 30 1 2.4100 2.1496 5.5236 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000710013460.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:20:56 Heat of formation + Delta-G solvation = -38.658862 kcal Electronic energy + Delta-G solvation = -16609.251744 eV Core-core repulsion = 13649.304544 eV Total energy + Delta-G solvation = -2959.947200 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 274.027 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.07324 -37.75566 -36.32639 -36.12086 -33.55486 -31.78494 -30.48952 -29.53998 -27.52624 -23.67363 -22.98953 -22.42610 -20.09962 -18.22774 -16.43756 -16.23218 -16.08155 -15.24415 -14.87601 -14.53290 -14.10688 -13.60289 -13.42929 -12.83746 -12.15880 -12.04672 -11.95509 -11.75769 -11.49800 -11.42928 -11.21658 -11.04953 -10.93385 -10.74937 -10.51696 -10.47180 -10.11464 -9.46634 -9.17764 -8.68564 -8.40638 -7.97663 -6.04005 -4.05645 1.00001 1.31979 1.90527 2.45577 3.33766 3.37792 3.41962 3.53289 3.69368 4.44818 4.83690 4.93056 5.07827 5.26356 5.33858 5.41668 5.51392 5.62855 5.83267 5.93673 6.04286 6.14626 6.26971 6.48922 6.53321 6.64083 7.38246 7.51024 7.90527 7.92123 8.30978 8.97144 9.58106 11.07295 Molecular weight = 274.03amu Principal moments of inertia in cm(-1) A = 0.019747 B = 0.005920 C = 0.005200 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1417.622357 B = 4728.501908 C = 5383.809170 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.084 3.916 3 H 0.066 0.934 4 C 0.027 3.973 5 C -0.516 4.516 6 H 0.055 0.945 7 C 0.060 3.940 8 N -0.896 5.896 9 Si 0.891 3.109 10 H -0.275 1.275 11 H -0.287 1.287 12 H -0.277 1.277 13 O -0.272 6.272 14 C 0.174 3.826 15 C -0.203 4.203 16 C -0.064 4.064 17 C -0.156 4.156 18 C 0.007 3.993 19 Cl -0.055 7.055 20 C -0.079 4.079 21 Cl -0.037 7.037 22 H 0.048 0.952 23 H 0.070 0.930 24 H 0.064 0.936 25 H 0.031 0.969 26 H 0.040 0.960 27 H 0.262 0.738 28 H 0.145 0.855 29 H 0.136 0.864 30 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.936 6.711 14.764 16.953 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.028 3.972 3 H 0.083 0.917 4 C -0.010 4.010 5 C -0.554 4.554 6 H 0.073 0.927 7 C -0.141 4.141 8 N -0.535 5.535 9 Si 0.719 3.281 10 H -0.201 1.201 11 H -0.212 1.212 12 H -0.203 1.203 13 O -0.184 6.184 14 C 0.124 3.876 15 C -0.222 4.222 16 C -0.082 4.082 17 C -0.176 4.176 18 C -0.021 4.021 19 Cl -0.026 7.026 20 C -0.107 4.107 21 Cl -0.008 7.008 22 H 0.068 0.932 23 H 0.089 0.911 24 H 0.083 0.917 25 H 0.049 0.951 26 H 0.058 0.942 27 H 0.072 0.928 28 H 0.163 0.837 29 H 0.154 0.846 30 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -4.754 6.174 14.653 16.596 hybrid contribution 1.089 0.014 -0.071 1.092 sum -3.665 6.188 14.582 16.259 Atomic orbital electron populations 1.22429 0.96637 1.02924 1.01603 1.23032 0.92065 0.97254 0.84802 0.91651 1.19266 0.96679 0.96606 0.88431 1.21047 0.91551 1.34790 1.07996 0.92685 1.24950 0.98430 0.95127 0.95628 1.69929 1.35704 1.35794 1.12076 0.86665 0.85734 0.78245 0.77501 1.20051 1.21239 1.20254 1.86405 1.78954 1.37360 1.15650 1.18729 0.91604 0.90151 0.87121 1.21482 1.06497 0.93694 1.00572 1.20930 0.96230 0.99623 0.91456 1.20784 1.03608 0.93021 1.00136 1.20452 1.00533 0.93818 0.87290 1.98369 1.82440 1.84570 1.37194 1.19953 1.08005 0.89581 0.93155 1.98381 1.87055 1.16801 1.98596 0.93249 0.91082 0.91674 0.95113 0.94163 0.92845 0.83746 0.84631 0.84517 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.81 9.17 37.16 0.34 -2.47 16 2 C 0.08 1.64 2.17 -26.73 -0.06 1.58 16 3 H 0.07 1.22 6.31 -51.92 -0.33 0.89 16 4 C 0.03 0.66 4.68 -27.89 -0.13 0.53 16 5 C -0.52 -14.31 8.88 -34.44 -0.31 -14.62 16 6 H 0.05 1.52 7.74 -52.49 -0.41 1.12 16 7 C 0.06 1.70 5.46 -17.82 -0.10 1.61 16 8 N -0.90 -26.45 13.29 55.43 0.74 -25.71 16 9 Si 0.89 21.84 29.54 -169.99 -5.02 16.82 16 10 H -0.28 -6.76 7.11 56.52 0.40 -6.36 16 11 H -0.29 -6.92 7.11 56.52 0.40 -6.52 16 12 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 13 O -0.27 -5.58 9.01 -19.51 -0.18 -5.76 16 14 C 0.17 3.04 6.59 -39.20 -0.26 2.78 16 15 C -0.20 -2.90 8.24 -39.44 -0.33 -3.23 16 16 C -0.06 -0.74 10.04 -39.60 -0.40 -1.14 16 17 C -0.16 -1.86 9.83 -39.53 -0.39 -2.25 16 18 C 0.01 0.10 6.32 -39.49 -0.25 -0.15 16 19 Cl -0.05 -0.71 27.96 -51.86 -1.45 -2.16 16 20 C -0.08 -1.33 6.34 -39.33 -0.25 -1.58 16 21 Cl -0.04 -0.66 27.51 -51.86 -1.43 -2.09 16 22 H 0.05 0.67 6.91 -51.93 -0.36 0.31 16 23 H 0.07 1.02 8.14 -51.93 -0.42 0.60 16 24 H 0.06 1.05 8.14 -51.93 -0.42 0.63 16 25 H 0.03 0.82 8.14 -51.93 -0.42 0.40 16 26 H 0.04 1.02 8.14 -51.93 -0.42 0.59 16 27 H 0.26 7.35 8.31 -40.82 -0.34 7.01 16 28 H 0.14 1.89 5.43 -52.49 -0.28 1.60 16 29 H 0.14 1.11 8.06 -52.49 -0.42 0.69 16 30 H 0.14 1.26 8.06 -52.49 -0.42 0.84 16 LS Contribution 289.73 15.07 4.37 4.37 Total: -1.00 -29.76 289.73 -8.14 -37.90 By element: Atomic # 1 Polarization: -1.38 SS G_CDS: -3.05 Total: -4.43 kcal Atomic # 6 Polarization: -16.82 SS G_CDS: -2.12 Total: -18.93 kcal Atomic # 7 Polarization: -26.45 SS G_CDS: 0.74 Total: -25.71 kcal Atomic # 8 Polarization: -5.58 SS G_CDS: -0.18 Total: -5.76 kcal Atomic # 14 Polarization: 21.84 SS G_CDS: -5.02 Total: 16.82 kcal Atomic # 17 Polarization: -1.37 SS G_CDS: -2.88 Total: -4.25 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -29.76 -8.14 -37.90 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000710013460.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.763 kcal (2) G-P(sol) polarization free energy of solvation -29.757 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.520 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.139 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.896 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.659 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds