Wall clock time and date at job start Mon Mar 30 2020 07:22:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 F 1.39895 * 109.47319 * 2 1 4 4 F 1.39904 * 109.47275 * 239.99860 * 2 1 3 5 5 C 1.50694 * 109.47201 * 120.00363 * 2 1 3 6 6 C 1.38376 * 120.00791 * 267.81885 * 5 2 1 7 7 Cl 1.73606 * 120.01024 * 0.02562 * 6 5 2 8 8 C 1.38329 * 119.97804 * 179.97438 * 6 5 2 9 9 C 1.38243 * 119.98586 * 359.77661 * 8 6 5 10 10 C 1.38220 * 120.00859 * 0.48147 * 9 8 6 11 11 C 1.38198 * 120.01153 * 87.79770 * 5 2 1 12 12 C 1.50701 * 119.98799 * 0.02562 * 11 5 2 13 13 H 1.08992 * 109.47280 * 328.74174 * 12 11 5 14 14 N 1.46899 * 109.46912 * 208.74048 * 12 11 5 15 15 C 1.50696 * 109.47163 * 88.74378 * 12 11 5 16 16 H 1.07999 * 120.00028 * 359.97438 * 15 12 11 17 17 C 1.37884 * 120.00449 * 179.97438 * 15 12 11 18 18 N 1.31507 * 120.00314 * 179.97438 * 17 15 12 19 19 Si 1.86804 * 119.99336 * 359.97438 * 17 15 12 20 20 H 1.48507 * 109.46856 * 90.00146 * 19 17 15 21 21 H 1.48495 * 109.47155 * 209.99918 * 19 17 15 22 22 H 1.48496 * 109.47464 * 330.00151 * 19 17 15 23 23 H 1.08991 * 109.47566 * 302.70047 * 1 2 3 24 24 H 1.08999 * 109.46889 * 62.70526 * 1 2 3 25 25 H 1.09008 * 109.47055 * 182.69986 * 1 2 3 26 26 H 1.07999 * 120.01210 * 180.02562 * 8 6 5 27 27 H 1.07990 * 119.99507 * 180.25032 * 9 8 6 28 28 H 1.08000 * 119.98639 * 179.77142 * 10 9 8 29 29 H 1.00893 * 111.00276 * 300.00098 * 14 12 11 30 30 H 1.00900 * 111.00242 * 63.95885 * 14 12 11 31 31 H 0.97006 * 119.99901 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 9 1.9963 1.3189 0.0000 4 9 1.9963 -0.6595 -1.1423 5 6 2.0323 -0.7105 1.2304 6 6 2.3060 0.0078 2.3810 7 17 2.0701 1.7276 2.4078 8 6 2.7666 -0.6450 3.5102 9 6 2.9488 -2.0152 3.4901 10 6 2.6803 -2.7315 2.3388 11 6 2.2193 -2.0796 1.2100 12 6 1.9214 -2.8620 -0.0430 13 1 1.1097 -2.3801 -0.5879 14 7 1.5255 -4.2301 0.3165 15 6 3.1521 -2.9071 -0.9116 16 1 4.0591 -2.4178 -0.5887 17 6 3.1202 -3.5731 -2.1185 18 7 4.1940 -3.6121 -2.8766 19 14 1.5515 -4.4201 -2.6765 20 1 0.7276 -3.4673 -3.4632 21 1 1.8953 -5.5919 -3.5214 22 1 0.7846 -4.8741 -1.4888 23 1 -0.3634 0.5551 0.8647 24 1 -0.3633 0.4713 -0.9132 25 1 -0.3633 -1.0266 0.0484 26 1 2.9799 -0.0850 4.4087 27 1 3.3045 -2.5256 4.3728 28 1 2.8263 -3.8014 2.3223 29 1 2.2618 -4.6984 0.8230 30 1 0.6660 -4.2307 0.8452 31 1 4.1716 -4.0810 -3.7255 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260586473.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:22:52 Heat of formation + Delta-G solvation = -51.759928 kcal Electronic energy + Delta-G solvation = -20168.568207 eV Core-core repulsion = 16726.663405 eV Total energy + Delta-G solvation = -3441.904802 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 275.058 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -48.32375 -46.28974 -39.37201 -36.40335 -34.83591 -32.69968 -31.84343 -29.62569 -29.32931 -26.44271 -23.83833 -23.09637 -20.98575 -20.14710 -17.29698 -17.08609 -16.66385 -15.85603 -15.69170 -15.15347 -14.73037 -14.29606 -14.05101 -13.65785 -13.43549 -13.11647 -12.89695 -12.64906 -12.32542 -12.26416 -12.14659 -11.97132 -11.47579 -11.31460 -11.08511 -10.76446 -10.61948 -10.38382 -10.15599 -9.85641 -9.30534 -8.62978 -8.50288 -8.28115 -7.33735 -5.96329 -4.03999 1.26061 1.49512 2.27306 3.52409 3.62104 3.77046 3.90769 4.13392 4.50965 4.72053 4.80355 5.05889 5.14389 5.20212 5.30513 5.43994 5.54539 5.69691 5.81814 5.82497 5.94661 6.02114 6.12851 6.32498 6.53359 6.55686 6.94484 6.97748 7.56498 8.06439 8.27167 8.63291 9.01611 9.66391 11.13671 Molecular weight = 275.06amu Principal moments of inertia in cm(-1) A = 0.023348 B = 0.008243 C = 0.007061 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1198.945935 B = 3395.882322 C = 3964.466623 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C 0.331 3.669 3 F -0.196 7.196 4 F -0.152 7.152 5 C -0.148 4.148 6 C -0.007 4.007 7 Cl -0.065 7.065 8 C -0.138 4.138 9 C -0.092 4.092 10 C -0.125 4.125 11 C -0.023 4.023 12 C 0.211 3.789 13 H 0.059 0.941 14 N -0.834 5.834 15 C -0.501 4.501 16 H 0.068 0.932 17 C 0.088 3.912 18 N -0.898 5.898 19 Si 0.861 3.139 20 H -0.296 1.296 21 H -0.304 1.304 22 H -0.193 1.193 23 H 0.082 0.918 24 H 0.083 0.917 25 H 0.088 0.912 26 H 0.130 0.870 27 H 0.129 0.871 28 H 0.131 0.869 29 H 0.330 0.670 30 H 0.308 0.692 31 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.644 5.339 12.383 15.501 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.247 4.247 2 C 0.294 3.706 3 F -0.177 7.177 4 F -0.132 7.132 5 C -0.150 4.150 6 C -0.033 4.033 7 Cl -0.036 7.036 8 C -0.156 4.156 9 C -0.110 4.110 10 C -0.143 4.143 11 C -0.025 4.025 12 C 0.102 3.898 13 H 0.077 0.923 14 N -0.364 5.364 15 C -0.539 4.539 16 H 0.086 0.914 17 C -0.116 4.116 18 N -0.535 5.535 19 Si 0.688 3.312 20 H -0.223 1.223 21 H -0.232 1.232 22 H -0.115 1.115 23 H 0.101 0.899 24 H 0.102 0.898 25 H 0.107 0.893 26 H 0.148 0.852 27 H 0.147 0.853 28 H 0.148 0.852 29 H 0.145 0.855 30 H 0.119 0.881 31 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -7.619 5.303 11.407 14.706 hybrid contribution -0.199 0.229 0.468 0.558 sum -7.818 5.531 11.875 15.255 Atomic orbital electron populations 1.22772 0.91922 1.05250 1.04718 1.19294 0.92977 0.75089 0.83226 1.93051 1.90613 1.37173 1.96889 1.93332 1.89880 1.79197 1.50801 1.20031 1.06291 0.94757 0.93915 1.20670 1.02628 0.84788 0.95259 1.98361 1.95317 1.11312 1.98644 1.20839 1.02864 0.94791 0.97139 1.21121 0.98371 0.93233 0.98324 1.21087 1.00095 1.00800 0.92328 1.21203 0.91395 0.92195 0.97752 1.18988 0.98637 0.83960 0.88240 0.92309 1.60116 1.06851 1.19394 1.50032 1.20437 0.95774 1.35350 1.02353 0.91404 1.24880 0.96623 0.94521 0.95546 1.69940 1.29100 1.42360 1.12093 0.87284 0.85377 0.78779 0.79774 1.22324 1.23179 1.11455 0.89923 0.89844 0.89346 0.85208 0.85338 0.85156 0.85499 0.88080 0.92831 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -2.78 9.19 37.16 0.34 -2.44 16 2 C 0.33 6.23 1.84 -27.89 -0.05 6.18 16 3 F -0.20 -3.73 13.78 2.25 0.03 -3.70 16 4 F -0.15 -3.52 12.25 2.25 0.03 -3.50 16 5 C -0.15 -2.73 4.99 -104.59 -0.52 -3.25 16 6 C -0.01 -0.11 6.27 -39.50 -0.25 -0.36 16 7 Cl -0.07 -0.98 25.74 -51.86 -1.33 -2.32 16 8 C -0.14 -1.94 9.83 -39.55 -0.39 -2.33 16 9 C -0.09 -1.26 10.05 -39.59 -0.40 -1.66 16 10 C -0.12 -2.00 9.28 -39.58 -0.37 -2.37 16 11 C -0.02 -0.43 4.93 -104.63 -0.52 -0.95 16 12 C 0.21 4.54 1.59 -70.02 -0.11 4.43 16 13 H 0.06 1.31 4.58 -51.93 -0.24 1.07 16 14 N -0.83 -15.81 5.50 -6.65 -0.04 -15.84 16 15 C -0.50 -13.57 7.33 -34.44 -0.25 -13.82 16 16 H 0.07 2.09 7.98 -52.49 -0.42 1.67 16 17 C 0.09 2.53 5.47 -17.82 -0.10 2.43 16 18 N -0.90 -27.70 13.96 55.43 0.77 -26.93 16 19 Si 0.86 21.26 26.94 -169.99 -4.58 16.68 16 20 H -0.30 -7.48 7.11 56.52 0.40 -7.08 16 21 H -0.30 -7.78 7.11 56.52 0.40 -7.38 16 22 H -0.19 -4.29 5.16 56.52 0.29 -4.00 16 23 H 0.08 1.05 8.14 -51.93 -0.42 0.63 16 24 H 0.08 1.12 8.14 -51.93 -0.42 0.70 16 25 H 0.09 1.25 7.22 -51.92 -0.37 0.88 16 26 H 0.13 1.49 8.06 -52.49 -0.42 1.06 16 27 H 0.13 1.33 8.06 -52.49 -0.42 0.91 16 28 H 0.13 1.91 6.35 -52.49 -0.33 1.58 16 29 H 0.33 5.95 7.18 -39.30 -0.28 5.67 16 30 H 0.31 4.89 9.06 -39.29 -0.36 4.54 16 31 H 0.26 7.69 8.31 -40.82 -0.34 7.35 16 LS Contribution 271.40 15.07 4.09 4.09 Total: -1.00 -31.49 271.40 -6.58 -38.07 By element: Atomic # 1 Polarization: 10.53 SS G_CDS: -2.94 Total: 7.59 kcal Atomic # 6 Polarization: -11.52 SS G_CDS: -2.61 Total: -14.13 kcal Atomic # 7 Polarization: -43.51 SS G_CDS: 0.74 Total: -42.78 kcal Atomic # 9 Polarization: -7.26 SS G_CDS: 0.06 Total: -7.20 kcal Atomic # 14 Polarization: 21.26 SS G_CDS: -4.58 Total: 16.68 kcal Atomic # 17 Polarization: -0.98 SS G_CDS: -1.33 Total: -2.32 kcal Total LS contribution 4.09 Total: 4.09 kcal Total: -31.49 -6.58 -38.07 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260586473.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.694 kcal (2) G-P(sol) polarization free energy of solvation -31.488 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.182 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.578 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.066 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.760 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds