Wall clock time and date at job start Mon Mar 30 2020 07:16:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35970 * 116.99701 * 2 1 4 4 C 1.38805 * 120.02873 * 270.29691 * 3 2 1 5 5 F 1.35106 * 120.06098 * 359.97438 * 4 3 2 6 6 C 1.38730 * 119.87857 * 180.27246 * 4 3 2 7 7 O 1.35977 * 120.03399 * 179.70245 * 6 4 3 8 8 C 1.38822 * 119.92178 * 359.72540 * 6 4 3 9 9 Cl 1.73606 * 119.97435 * 179.97438 * 8 6 4 10 10 C 1.38253 * 120.05288 * 359.97438 * 8 6 4 11 11 C 1.38245 * 120.12014 * 0.02562 * 10 8 6 12 12 C 1.50701 * 119.96068 * 180.02562 * 11 10 8 13 13 H 1.09002 * 109.47060 * 145.00412 * 12 11 10 14 14 N 1.46901 * 109.46921 * 25.00231 * 12 11 10 15 15 C 1.50699 * 109.47269 * 265.00265 * 12 11 10 16 16 H 1.08000 * 119.99792 * 0.02562 * 15 12 11 17 17 C 1.37878 * 119.99902 * 179.97438 * 15 12 11 18 18 N 1.31515 * 120.00126 * 0.02562 * 17 15 12 19 19 Si 1.86803 * 119.99745 * 180.02562 * 17 15 12 20 20 H 1.48501 * 109.47438 * 0.02562 * 19 17 15 21 21 H 1.48491 * 109.47045 * 120.00577 * 19 17 15 22 22 H 1.48501 * 109.46950 * 240.00369 * 19 17 15 23 23 H 1.09004 * 109.47078 * 179.97438 * 1 2 3 24 24 H 1.08996 * 109.47155 * 299.99685 * 1 2 3 25 25 H 1.08997 * 109.47151 * 60.00466 * 1 2 3 26 26 H 0.96704 * 114.00639 * 270.01772 * 7 6 4 27 27 H 1.08004 * 119.94149 * 180.02562 * 10 8 6 28 28 H 1.00901 * 110.99547 * 176.04411 * 14 12 11 29 29 H 1.00898 * 111.00245 * 299.99784 * 14 12 11 30 30 H 0.96999 * 120.00073 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 2.3560 1.8333 -1.2017 5 9 2.0453 1.2355 -2.3728 6 6 2.9909 3.0668 -1.1981 7 8 3.3013 3.6759 -2.3735 8 6 3.3093 3.6782 0.0068 9 17 4.1044 5.2215 0.0129 10 6 2.9938 3.0591 1.2020 11 6 2.3612 1.8299 1.2007 12 6 2.0184 1.1585 2.5057 13 1 1.0774 0.6185 2.4003 14 7 1.8849 2.1741 3.5586 15 6 3.1134 0.1917 2.8761 16 1 3.9720 0.0754 2.2313 17 6 3.0197 -0.5435 4.0387 18 7 1.9745 -0.4015 4.8241 19 14 4.3775 -1.7414 4.4982 20 1 5.4350 -1.7146 3.4560 21 1 4.9618 -1.3493 5.8058 22 1 3.8153 -3.1122 4.5984 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5137 -0.8900 26 1 4.1764 3.4477 -2.7159 27 1 3.2420 3.5366 2.1385 28 1 1.5923 1.7561 4.4291 29 1 2.7449 2.6887 3.6757 30 1 1.9084 -0.9191 5.6419 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260651534.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:16:05 Heat of formation + Delta-G solvation = -105.278592 kcal Electronic energy + Delta-G solvation = -19501.681419 eV Core-core repulsion = 16045.083085 eV Total energy + Delta-G solvation = -3456.598335 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 275.051 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -48.64433 -39.81152 -38.10829 -36.48543 -36.06654 -34.32069 -31.51855 -29.70005 -28.75227 -26.62950 -25.95921 -23.39919 -22.29289 -20.52327 -18.68862 -17.30714 -16.88959 -16.69827 -16.50867 -15.61429 -15.30731 -14.89392 -14.58960 -14.30723 -14.19608 -13.45067 -13.13650 -12.89446 -12.77390 -12.49762 -11.77547 -11.56648 -11.45616 -11.20238 -11.03097 -10.81480 -10.64834 -10.49555 -10.05069 -9.92612 -9.56321 -8.77678 -8.31314 -8.14214 -7.38496 -6.20374 -4.34984 1.13094 1.29285 2.20898 3.17363 3.26442 3.31104 3.51707 3.83046 4.27223 4.36194 4.51346 5.02098 5.14393 5.31891 5.56908 5.67185 5.71235 5.88949 5.96790 6.11618 6.22060 6.40469 6.63972 6.82196 7.43139 7.55663 7.65623 7.80955 7.92159 8.50013 8.77139 8.92759 9.35698 10.79083 Molecular weight = 275.05amu Principal moments of inertia in cm(-1) A = 0.018356 B = 0.006932 C = 0.005832 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1525.051225 B = 4038.264448 C = 4799.726777 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.311 6.311 3 C 0.078 3.922 4 C 0.063 3.937 5 F -0.128 7.128 6 C 0.061 3.939 7 O -0.478 6.478 8 C -0.040 4.040 9 Cl -0.059 7.059 10 C -0.087 4.087 11 C -0.012 4.012 12 C 0.246 3.754 13 H 0.060 0.940 14 N -0.852 5.852 15 C -0.536 4.536 16 H 0.058 0.942 17 C 0.068 3.932 18 N -0.893 5.893 19 Si 0.900 3.100 20 H -0.272 1.272 21 H -0.283 1.283 22 H -0.282 1.282 23 H 0.094 0.906 24 H 0.054 0.946 25 H 0.039 0.961 26 H 0.386 0.614 27 H 0.150 0.850 28 H 0.361 0.639 29 H 0.313 0.687 30 H 0.266 0.734 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.999 5.784 -8.349 10.206 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.227 6.227 3 C 0.032 3.968 4 C 0.042 3.958 5 F -0.106 7.106 6 C 0.015 3.985 7 O -0.287 6.287 8 C -0.067 4.067 9 Cl -0.030 7.030 10 C -0.106 4.106 11 C -0.014 4.014 12 C 0.136 3.864 13 H 0.078 0.922 14 N -0.383 5.383 15 C -0.576 4.576 16 H 0.076 0.924 17 C -0.134 4.134 18 N -0.533 5.533 19 Si 0.727 3.273 20 H -0.196 1.196 21 H -0.209 1.209 22 H -0.208 1.208 23 H 0.112 0.888 24 H 0.073 0.927 25 H 0.058 0.942 26 H 0.242 0.758 27 H 0.167 0.833 28 H 0.178 0.822 29 H 0.123 0.877 30 H 0.076 0.924 Dipole moment (debyes) X Y Z Total from point charges -0.096 6.212 -8.630 10.634 hybrid contribution 1.844 -1.330 0.412 2.310 sum 1.748 4.883 -8.218 9.717 Atomic orbital electron populations 1.23004 0.79091 1.03312 1.00500 1.86151 1.19657 1.22919 1.93941 1.18427 1.00389 0.87917 0.90018 1.18196 1.04611 0.91434 0.81561 1.91459 1.91023 1.82917 1.45216 1.17656 1.04094 0.91295 0.85501 1.84895 1.39504 1.69065 1.35186 1.21096 1.02156 0.89699 0.93760 1.98344 1.78349 1.27448 1.98876 1.20841 0.98303 0.94900 0.96571 1.20822 0.92395 0.91555 0.96612 1.17947 0.97256 0.88132 0.83103 0.92199 1.59595 1.35305 1.29563 1.13863 1.21671 1.05936 1.23338 1.06651 0.92392 1.24973 0.95891 0.96433 0.96147 1.69727 1.28315 1.41784 1.13429 0.86407 0.81799 0.80789 0.78281 1.19649 1.20915 1.20755 0.88752 0.92694 0.94226 0.75838 0.83288 0.82209 0.87721 0.92361 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.57 10.80 101.05 1.09 1.66 16 2 O -0.31 -6.31 9.55 -19.65 -0.19 -6.49 16 3 C 0.08 1.56 5.70 -39.21 -0.22 1.34 16 4 C 0.06 1.14 7.32 -39.19 -0.29 0.85 16 5 F -0.13 -2.29 16.95 2.25 0.04 -2.25 16 6 C 0.06 1.02 6.70 -39.18 -0.26 0.75 16 7 O -0.48 -6.80 12.82 -19.67 -0.25 -7.06 16 8 C -0.04 -0.66 6.33 -39.36 -0.25 -0.91 16 9 Cl -0.06 -0.84 28.50 -51.86 -1.48 -2.32 16 10 C -0.09 -1.58 9.04 -39.57 -0.36 -1.94 16 11 C -0.01 -0.25 5.01 -104.45 -0.52 -0.77 16 12 C 0.25 5.72 2.66 -70.02 -0.19 5.53 16 13 H 0.06 1.53 6.41 -51.93 -0.33 1.19 16 14 N -0.85 -18.68 8.79 -6.65 -0.06 -18.74 16 15 C -0.54 -13.77 8.71 -34.44 -0.30 -14.07 16 16 H 0.06 1.53 7.74 -52.49 -0.41 1.13 16 17 C 0.07 1.76 5.38 -17.82 -0.10 1.66 16 18 N -0.89 -23.43 11.54 55.43 0.64 -22.79 16 19 Si 0.90 20.43 29.54 -169.99 -5.02 15.41 16 20 H -0.27 -6.21 7.11 56.52 0.40 -5.81 16 21 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 22 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 23 H 0.09 1.32 8.14 -51.93 -0.42 0.89 16 24 H 0.05 0.92 7.17 -51.93 -0.37 0.54 16 25 H 0.04 0.57 8.14 -51.93 -0.42 0.15 16 26 H 0.39 3.75 9.06 45.56 0.41 4.17 16 27 H 0.15 2.57 6.28 -52.48 -0.33 2.25 16 28 H 0.36 8.54 7.08 -39.29 -0.28 8.27 16 29 H 0.31 6.42 7.20 -39.29 -0.28 6.14 16 30 H 0.27 6.69 8.31 -40.82 -0.34 6.35 16 LS Contribution 282.18 15.07 4.25 4.25 Total: -1.00 -27.55 282.18 -5.03 -32.58 By element: Atomic # 1 Polarization: 14.86 SS G_CDS: -1.57 Total: 13.29 kcal Atomic # 6 Polarization: -4.49 SS G_CDS: -1.39 Total: -5.89 kcal Atomic # 7 Polarization: -42.11 SS G_CDS: 0.58 Total: -41.53 kcal Atomic # 8 Polarization: -13.11 SS G_CDS: -0.44 Total: -13.55 kcal Atomic # 9 Polarization: -2.29 SS G_CDS: 0.04 Total: -2.25 kcal Atomic # 14 Polarization: 20.43 SS G_CDS: -5.02 Total: 15.41 kcal Atomic # 17 Polarization: -0.84 SS G_CDS: -1.48 Total: -2.32 kcal Total LS contribution 4.25 Total: 4.25 kcal Total: -27.55 -5.03 -32.58 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260651534.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.697 kcal (2) G-P(sol) polarization free energy of solvation -27.552 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.249 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.030 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.582 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.279 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds