Wall clock time and date at job start Mon Mar 30 2020 07:38:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 H 1.09002 * 109.47268 * 2 1 4 4 C 1.53000 * 109.47181 * 239.99877 * 2 1 3 5 5 C 1.50704 * 109.47048 * 175.00141 * 4 2 1 6 6 H 1.07998 * 120.00029 * 359.97438 * 5 4 2 7 7 C 1.37884 * 119.99678 * 180.02562 * 5 4 2 8 8 N 1.31509 * 120.00086 * 359.97438 * 7 5 4 9 9 Si 1.86800 * 119.99716 * 179.97438 * 7 5 4 10 10 H 1.48499 * 109.46794 * 89.99917 * 9 7 5 11 11 H 1.48494 * 109.46874 * 209.99766 * 9 7 5 12 12 H 1.48500 * 109.47059 * 330.00343 * 9 7 5 13 13 O 1.42900 * 109.47062 * 119.99731 * 2 1 3 14 14 C 1.35968 * 117.00207 * 275.04421 * 13 2 1 15 15 C 1.38687 * 120.03905 * 5.48083 * 14 13 2 16 16 C 1.38185 * 120.02468 * 180.02562 * 15 14 13 17 17 C 1.38340 * 120.09730 * 0.25817 * 16 15 14 18 18 Cl 1.73602 * 119.95700 * 179.74326 * 17 16 15 19 19 C 1.38546 * 120.07808 * 359.48510 * 17 16 15 20 20 F 1.35103 * 120.01165 * 180.27788 * 19 17 16 21 21 C 1.38517 * 119.97405 * 0.51161 * 19 17 16 22 22 F 1.35098 * 120.04975 * 179.72168 * 21 19 17 23 23 H 1.09002 * 109.47268 * 179.97438 * 1 2 3 24 24 H 1.09004 * 109.47221 * 300.00021 * 1 2 3 25 25 H 1.09006 * 109.47214 * 60.00113 * 1 2 3 26 26 H 1.09005 * 109.47124 * 295.00137 * 4 2 1 27 27 H 1.09001 * 109.47265 * 55.00068 * 4 2 1 28 28 H 0.96995 * 120.00258 * 179.97438 * 8 7 5 29 29 H 1.08000 * 119.98605 * 0.04119 * 15 14 13 30 30 H 1.07993 * 119.94791 * 179.97438 * 16 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0399 -0.7213 -1.2492 5 6 3.5419 -0.6149 -1.3127 6 1 4.0789 -0.0855 -0.5396 7 6 4.2303 -1.1927 -2.3583 8 7 3.5764 -1.8370 -3.3000 9 14 6.0920 -1.0603 -2.4373 10 1 6.7007 -2.2129 -1.7259 11 1 6.5289 -1.0678 -3.8565 12 1 6.5260 0.2048 -1.7922 13 8 2.0063 -0.6736 1.1668 14 6 2.1116 0.0628 2.3050 15 6 1.6578 1.3731 2.3286 16 6 1.7655 2.1214 3.4853 17 6 2.3307 1.5673 4.6199 18 17 2.4702 2.5128 6.0691 19 6 2.7805 0.2570 4.6025 20 9 3.3271 -0.2845 5.7130 21 6 2.6741 -0.4959 3.4447 22 9 3.1174 -1.7719 3.4244 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3634 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 1.7516 -1.7716 -1.2056 27 1 1.6054 -0.2618 -2.1370 28 1 4.0606 -2.2431 -4.0358 29 1 1.2198 1.8087 1.4427 30 1 1.4121 3.1417 3.5022 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000695785784.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:38:37 Heat of formation + Delta-G solvation = -117.853539 kcal Electronic energy + Delta-G solvation = -18979.276119 eV Core-core repulsion = 15436.786621 eV Total energy + Delta-G solvation = -3542.489498 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 276.047 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -49.41502 -48.40538 -40.06216 -37.75391 -36.39883 -33.63163 -31.85140 -30.47336 -29.49746 -27.59951 -23.86758 -23.26149 -22.80392 -20.37646 -18.62804 -17.58592 -17.20722 -16.61766 -16.39072 -16.34771 -15.27022 -15.05112 -14.76211 -14.43719 -14.30967 -14.00149 -13.28433 -13.00186 -12.87788 -12.38836 -12.12215 -12.04467 -11.77529 -11.50225 -11.35585 -11.18651 -10.90878 -10.79528 -10.48356 -10.20975 -9.55333 -9.23278 -8.92720 -8.46392 -8.11880 -6.09628 -4.12072 0.73570 0.88996 1.82780 3.11505 3.23637 3.29590 3.35920 3.38817 3.89406 4.31475 4.40172 4.57990 4.66326 5.01172 5.26598 5.29070 5.40799 5.51783 5.68448 5.73524 5.81499 5.90133 6.00101 6.39272 6.43943 6.52818 7.27544 7.42519 7.75228 7.85668 8.23515 8.90858 9.52388 11.01588 Molecular weight = 276.05amu Principal moments of inertia in cm(-1) A = 0.022362 B = 0.004962 C = 0.004608 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1251.819604 B = 5641.333039 C = 6074.810559 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.082 3.918 3 H 0.069 0.931 4 C 0.025 3.975 5 C -0.520 4.520 6 H 0.056 0.944 7 C 0.060 3.940 8 N -0.894 5.894 9 Si 0.892 3.108 10 H -0.279 1.279 11 H -0.286 1.286 12 H -0.274 1.274 13 O -0.271 6.271 14 C 0.157 3.843 15 C -0.191 4.191 16 C -0.048 4.048 17 C -0.103 4.103 18 Cl -0.050 7.050 19 C 0.114 3.886 20 F -0.115 7.115 21 C 0.035 3.965 22 F -0.113 7.113 23 H 0.065 0.935 24 H 0.050 0.950 25 H 0.073 0.927 26 H 0.031 0.969 27 H 0.043 0.957 28 H 0.262 0.738 29 H 0.157 0.843 30 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.955 8.527 13.572 17.099 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.027 3.973 3 H 0.087 0.913 4 C -0.011 4.011 5 C -0.558 4.558 6 H 0.074 0.926 7 C -0.141 4.141 8 N -0.533 5.533 9 Si 0.720 3.280 10 H -0.205 1.205 11 H -0.211 1.211 12 H -0.198 1.198 13 O -0.183 6.183 14 C 0.107 3.893 15 C -0.210 4.210 16 C -0.067 4.067 17 C -0.131 4.131 18 Cl -0.022 7.022 19 C 0.093 3.907 20 F -0.094 7.094 21 C 0.014 3.986 22 F -0.092 7.092 23 H 0.084 0.916 24 H 0.069 0.931 25 H 0.092 0.908 26 H 0.050 0.950 27 H 0.061 0.939 28 H 0.072 0.928 29 H 0.175 0.825 30 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -5.838 8.220 13.508 16.855 hybrid contribution 1.197 -0.106 0.159 1.212 sum -4.641 8.114 13.666 16.557 Atomic orbital electron populations 1.22445 0.96311 1.03124 1.01839 1.23137 0.92292 0.97404 0.84438 0.91276 1.19301 0.96775 0.96679 0.88367 1.21083 0.91522 1.35047 1.08159 0.92623 1.24959 0.98572 0.95036 0.95553 1.69932 1.35705 1.35663 1.12038 0.86578 0.85567 0.78671 0.77167 1.20489 1.21138 1.19843 1.86417 1.78772 1.37428 1.15643 1.19017 0.92169 0.90762 0.87385 1.21337 1.06250 0.93202 1.00173 1.20757 0.95795 1.00449 0.89659 1.20438 1.10000 0.91299 0.91350 1.98368 1.97002 1.71170 1.35620 1.16920 1.00104 0.90887 0.82817 1.91552 1.82881 1.85709 1.49212 1.16603 1.07474 0.81967 0.92535 1.91561 1.87177 1.33751 1.96686 0.91556 0.93090 0.90811 0.95038 0.93878 0.92803 0.82509 0.83280 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.64 9.17 37.15 0.34 -2.30 16 2 C 0.08 1.53 2.17 -26.73 -0.06 1.47 16 3 H 0.07 1.19 6.31 -51.93 -0.33 0.87 16 4 C 0.03 0.61 4.68 -27.88 -0.13 0.48 16 5 C -0.52 -14.17 8.88 -34.44 -0.31 -14.47 16 6 H 0.06 1.51 7.74 -52.49 -0.41 1.10 16 7 C 0.06 1.69 5.46 -17.82 -0.10 1.59 16 8 N -0.89 -26.02 13.29 55.43 0.74 -25.28 16 9 Si 0.89 21.51 29.54 -169.99 -5.02 16.49 16 10 H -0.28 -6.75 7.11 56.52 0.40 -6.34 16 11 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 12 H -0.27 -6.46 7.11 56.52 0.40 -6.06 16 13 O -0.27 -5.40 9.42 -19.64 -0.18 -5.59 16 14 C 0.16 2.62 6.60 -39.19 -0.26 2.36 16 15 C -0.19 -2.48 8.24 -39.43 -0.33 -2.80 16 16 C -0.05 -0.53 9.82 -39.56 -0.39 -0.92 16 17 C -0.10 -1.31 6.32 -39.43 -0.25 -1.56 16 18 Cl -0.05 -0.57 28.61 -51.86 -1.48 -2.05 16 19 C 0.11 1.70 7.28 -39.36 -0.29 1.41 16 20 F -0.12 -1.75 16.75 2.25 0.04 -1.71 16 21 C 0.04 0.60 7.31 -39.26 -0.29 0.31 16 22 F -0.11 -2.14 17.02 2.25 0.04 -2.10 16 23 H 0.07 1.01 8.14 -51.93 -0.42 0.59 16 24 H 0.05 0.62 6.91 -51.93 -0.36 0.27 16 25 H 0.07 0.98 8.14 -51.93 -0.42 0.56 16 26 H 0.03 0.82 8.14 -51.93 -0.42 0.40 16 27 H 0.04 1.05 8.14 -51.93 -0.42 0.63 16 28 H 0.26 7.23 8.31 -40.82 -0.34 6.89 16 29 H 0.16 1.78 5.42 -52.49 -0.28 1.50 16 30 H 0.15 1.19 8.06 -52.49 -0.42 0.77 16 LS Contribution 287.21 15.07 4.33 4.33 Total: -1.00 -29.32 287.21 -6.22 -35.54 By element: Atomic # 1 Polarization: -2.57 SS G_CDS: -2.63 Total: -5.19 kcal Atomic # 6 Polarization: -12.38 SS G_CDS: -2.05 Total: -14.43 kcal Atomic # 7 Polarization: -26.02 SS G_CDS: 0.74 Total: -25.28 kcal Atomic # 8 Polarization: -5.40 SS G_CDS: -0.18 Total: -5.59 kcal Atomic # 9 Polarization: -3.89 SS G_CDS: 0.08 Total: -3.81 kcal Atomic # 14 Polarization: 21.51 SS G_CDS: -5.02 Total: 16.49 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -1.48 Total: -2.05 kcal Total LS contribution 4.33 Total: 4.33 kcal Total: -29.32 -6.22 -35.54 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000695785784.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.316 kcal (2) G-P(sol) polarization free energy of solvation -29.316 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.632 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.221 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.538 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.854 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds