Wall clock time and date at job start Mon Mar 30 2020 07:50:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.28013 * 1 3 3 N 1.40101 * 120.00072 * 2 1 4 4 C 1.46501 * 120.00027 * 0.02562 * 3 2 1 5 5 C 1.50698 * 109.46840 * 269.99977 * 4 3 2 6 6 H 1.07997 * 120.00536 * 359.97438 * 5 4 3 7 7 C 1.37880 * 119.99748 * 180.02562 * 5 4 3 8 8 N 1.31512 * 120.00224 * 359.97438 * 7 5 4 9 9 Si 1.86802 * 119.99851 * 180.02562 * 7 5 4 10 10 H 1.48494 * 109.47520 * 59.99572 * 9 7 5 11 11 H 1.48498 * 109.46916 * 179.97438 * 9 7 5 12 12 H 1.48500 * 109.46871 * 299.99338 * 9 7 5 13 13 C 1.37743 * 120.00022 * 179.97438 * 3 2 1 14 14 N 1.30883 * 124.96797 * 0.02562 * 13 3 2 15 15 C 1.36083 * 108.70469 * 180.02562 * 14 13 3 16 16 C 1.39575 * 133.66579 * 180.02562 * 15 14 13 17 17 C 1.37753 * 119.73286 * 179.97438 * 16 15 14 18 18 C 1.38655 * 120.39375 * 0.02562 * 17 16 15 19 19 C 1.38021 * 120.46513 * 359.97311 * 18 17 16 20 20 C 1.38541 * 119.89909 * 0.02562 * 19 18 17 21 21 O 1.34501 * 124.96714 * 180.02562 * 13 3 2 22 22 H 1.08004 * 119.99932 * 180.02562 * 1 2 3 23 23 H 1.07997 * 120.00056 * 359.97438 * 1 2 3 24 24 H 1.08997 * 109.47153 * 29.99831 * 4 3 2 25 25 H 1.08995 * 109.47113 * 149.99903 * 4 3 2 26 26 H 0.96993 * 119.99951 * 179.97438 * 8 7 5 27 27 H 1.08006 * 120.13534 * 359.94811 * 16 15 14 28 28 H 1.08000 * 119.80818 * 180.02562 * 17 16 15 29 29 H 1.08003 * 119.76625 * 179.70459 * 18 17 16 30 30 H 1.08005 * 120.05376 * 179.97438 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.2801 0.0000 0.0000 3 7 1.9806 1.2133 0.0000 4 6 1.2482 2.4820 0.0006 5 6 0.9965 2.9173 -1.4201 6 1 1.3474 2.3100 -2.2412 7 6 0.3191 4.0916 -1.6715 8 7 -0.1078 4.8316 -0.6716 9 14 0.0065 4.6309 -3.4324 10 1 -0.7971 3.5964 -4.1318 11 1 -0.7359 5.9170 -3.4319 12 1 1.3036 4.8078 -4.1335 13 6 3.3581 1.2133 0.0005 14 7 4.1082 0.1407 0.0006 15 6 5.4146 0.5218 0.0018 16 6 6.6224 -0.1776 0.0019 17 6 7.8131 0.5153 0.0027 18 6 7.8179 1.9018 0.0040 19 6 6.6306 2.6057 0.0038 20 6 5.4241 1.9248 0.0030 21 8 4.1289 2.3155 0.0011 22 1 -0.5400 -0.9353 0.0004 23 1 -0.5400 0.9353 0.0004 24 1 0.2960 2.3516 0.5147 25 1 1.8374 3.2415 0.5143 26 1 -0.5840 5.6578 -0.8485 27 1 6.6236 -1.2576 0.0017 28 1 8.7484 -0.0247 0.0024 29 1 8.7572 2.4348 0.0095 30 1 6.6421 3.6857 0.0053 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000029415478.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 07:50:42 Heat of formation + Delta-G solvation = 100.642760 kcal Electronic energy + Delta-G solvation = -16874.319460 eV Core-core repulsion = 14059.056262 eV Total energy + Delta-G solvation = -2815.263198 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 245.090 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -42.56902 -37.92555 -37.15608 -34.03839 -33.24697 -31.96834 -30.28746 -28.93277 -27.21878 -23.66136 -23.28088 -22.25294 -21.45721 -19.76035 -17.57987 -17.30805 -16.87846 -16.65516 -16.11781 -15.43481 -14.62081 -14.25288 -13.74727 -13.36728 -13.32538 -13.14139 -12.19449 -12.02588 -11.99127 -11.63979 -11.17200 -11.07859 -10.92107 -10.87727 -10.50373 -9.92162 -9.76558 -9.36982 -8.88910 -8.73297 -8.42097 -7.07854 -6.32956 -4.44471 1.18436 1.57313 2.11441 2.58353 3.17284 3.21668 3.24631 3.36152 3.67359 4.05547 4.22002 4.66416 4.95978 4.99996 5.18215 5.37304 5.46381 5.64215 5.70510 5.88525 6.12215 6.33736 6.41042 6.57617 6.60889 6.68152 6.72756 6.88862 7.00201 7.55790 7.67722 7.76989 8.13820 8.54169 8.81481 9.24699 10.72433 Molecular weight = 245.09amu Principal moments of inertia in cm(-1) A = 0.024859 B = 0.006857 C = 0.005817 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1126.067038 B = 4082.563860 C = 4812.626779 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 N -0.222 5.222 3 N -0.413 5.413 4 C 0.221 3.779 5 C -0.547 4.547 6 H 0.062 0.938 7 C 0.070 3.930 8 N -0.888 5.888 9 Si 0.904 3.096 10 H -0.273 1.273 11 H -0.283 1.283 12 H -0.274 1.274 13 C 0.549 3.451 14 N -0.536 5.536 15 C 0.068 3.932 16 C -0.091 4.091 17 C -0.114 4.114 18 C -0.130 4.130 19 C -0.076 4.076 20 C -0.017 4.017 21 O -0.218 6.218 22 H 0.166 0.834 23 H 0.118 0.882 24 H 0.052 0.948 25 H 0.050 0.950 26 H 0.270 0.730 27 H 0.129 0.871 28 H 0.128 0.872 29 H 0.132 0.868 30 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.372 -5.511 2.075 10.235 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 N -0.023 5.023 3 N -0.220 5.220 4 C 0.101 3.899 5 C -0.586 4.586 6 H 0.081 0.919 7 C -0.134 4.134 8 N -0.525 5.525 9 Si 0.731 3.269 10 H -0.198 1.198 11 H -0.208 1.208 12 H -0.199 1.199 13 C 0.248 3.752 14 N -0.277 5.277 15 C -0.046 4.046 16 C -0.111 4.111 17 C -0.134 4.134 18 C -0.149 4.149 19 C -0.095 4.095 20 C -0.069 4.069 21 O -0.108 6.108 22 H 0.183 0.817 23 H 0.135 0.865 24 H 0.070 0.930 25 H 0.068 0.932 26 H 0.079 0.921 27 H 0.147 0.853 28 H 0.146 0.854 29 H 0.149 0.851 30 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 8.770 -6.308 2.135 11.012 hybrid contribution -0.834 1.891 -0.999 2.295 sum 7.936 -4.418 1.136 9.154 Atomic orbital electron populations 1.27389 0.91872 1.04290 0.96754 1.74204 1.10950 1.06061 1.11035 1.47009 0.97512 1.05305 1.72186 1.19956 0.93125 0.77710 0.99080 1.21334 1.38152 1.07686 0.91426 0.91940 1.24931 0.94705 0.95663 0.98127 1.69902 1.37223 1.14239 1.31171 0.86440 0.78693 0.78034 0.83734 1.19818 1.20809 1.19939 1.20684 0.85347 0.78815 0.90322 1.71240 0.99335 1.24805 1.32343 1.19914 0.92473 0.91005 1.01186 1.20126 0.88711 0.99787 1.02474 1.20877 0.97241 0.94133 1.01128 1.20747 0.96494 0.94105 1.03528 1.19784 0.87452 0.99951 1.02326 1.20099 0.83088 0.94928 1.08751 1.84553 1.15167 1.34134 1.76961 0.81746 0.86476 0.93000 0.93209 0.92075 0.85325 0.85385 0.85056 0.85311 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.56 15.35 51.17 0.79 1.34 16 2 N -0.22 -4.62 11.27 29.54 0.33 -4.29 16 3 N -0.41 -9.73 3.57 -63.57 -0.23 -9.96 16 4 C 0.22 5.54 4.74 -5.19 -0.02 5.52 16 5 C -0.55 -14.80 9.39 -34.44 -0.32 -15.12 16 6 H 0.06 1.75 7.81 -52.49 -0.41 1.34 16 7 C 0.07 1.88 5.46 -17.82 -0.10 1.78 16 8 N -0.89 -24.49 13.29 55.43 0.74 -23.75 16 9 Si 0.90 20.82 29.54 -169.99 -5.02 15.80 16 10 H -0.27 -6.16 7.11 56.52 0.40 -5.76 16 11 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 12 H -0.27 -6.38 7.11 56.52 0.40 -5.98 16 13 C 0.55 13.06 8.54 -87.53 -0.75 12.31 16 14 N -0.54 -12.22 11.19 -12.09 -0.14 -12.35 16 15 C 0.07 1.37 7.23 -84.71 -0.61 0.76 16 16 C -0.09 -1.42 10.10 -39.26 -0.40 -1.81 16 17 C -0.11 -1.44 10.02 -39.60 -0.40 -1.84 16 18 C -0.13 -1.64 10.03 -39.51 -0.40 -2.03 16 19 C -0.08 -1.19 10.06 -39.55 -0.40 -1.59 16 20 C -0.02 -0.35 7.42 -38.69 -0.29 -0.63 16 21 O -0.22 -5.08 10.14 2.39 0.02 -5.06 16 22 H 0.17 1.89 8.06 -52.48 -0.42 1.47 16 23 H 0.12 2.08 5.87 -52.49 -0.31 1.77 16 24 H 0.05 1.27 6.19 -51.93 -0.32 0.95 16 25 H 0.05 1.34 7.66 -51.93 -0.40 0.94 16 26 H 0.27 7.03 8.31 -40.82 -0.34 6.69 16 27 H 0.13 1.76 8.06 -52.48 -0.42 1.34 16 28 H 0.13 1.16 8.06 -52.49 -0.42 0.73 16 29 H 0.13 1.20 8.06 -52.48 -0.42 0.77 16 30 H 0.13 1.76 8.06 -52.48 -0.42 1.34 16 LS Contribution 274.78 15.07 4.14 4.14 Total: -1.00 -31.41 274.78 -5.73 -37.14 By element: Atomic # 1 Polarization: 2.34 SS G_CDS: -2.69 Total: -0.35 kcal Atomic # 6 Polarization: 1.57 SS G_CDS: -2.89 Total: -1.32 kcal Atomic # 7 Polarization: -51.06 SS G_CDS: 0.71 Total: -50.35 kcal Atomic # 8 Polarization: -5.08 SS G_CDS: 0.02 Total: -5.06 kcal Atomic # 14 Polarization: 20.82 SS G_CDS: -5.02 Total: 15.80 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -31.41 -5.73 -37.14 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000029415478.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 137.784 kcal (2) G-P(sol) polarization free energy of solvation -31.412 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 106.372 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.730 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.142 kcal (6) G-S(sol) free energy of system = (1) + (5) 100.643 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds