Wall clock time and date at job start Mon Mar 30 2020 17:32:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.36937 * 120.00302 * 2 1 4 4 H 1.08001 * 120.00196 * 202.36812 * 3 2 1 5 5 C 1.38816 * 119.99595 * 22.37549 * 3 2 1 6 6 N 1.31616 * 120.00026 * 11.33456 * 5 3 2 7 7 Si 1.86800 * 119.99716 * 191.33641 * 5 3 2 8 8 H 1.48495 * 109.47227 * 59.99855 * 7 5 3 9 9 H 1.48509 * 109.46912 * 179.97438 * 7 5 3 10 10 H 1.48500 * 109.47356 * 299.99733 * 7 5 3 11 11 C 1.46498 * 120.00093 * 180.02562 * 2 1 3 12 12 C 1.50703 * 109.47275 * 270.00086 * 11 2 1 13 13 C 1.33571 * 126.02084 * 89.99785 * 12 11 2 14 14 N 1.31857 * 114.51235 * 179.73837 * 13 12 11 15 15 C 1.29140 * 117.07777 * 359.97438 * 14 13 12 16 16 Cl 1.73600 * 124.92293 * 180.02562 * 15 14 13 17 17 S 1.70974 * 110.15419 * 359.97438 * 15 14 13 18 18 H 1.09003 * 109.47160 * 274.19568 * 1 2 3 19 19 H 1.08996 * 109.47127 * 34.19280 * 1 2 3 20 20 H 1.08994 * 109.47524 * 154.19602 * 1 2 3 21 21 H 0.96999 * 119.99513 * 179.97438 * 6 5 3 22 22 H 1.08995 * 109.47593 * 149.99662 * 11 2 1 23 23 H 1.09003 * 109.46983 * 29.99906 * 11 2 1 24 24 H 1.07994 * 122.74003 * 359.69953 * 13 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1497 1.1859 0.0000 4 1 3.1688 1.2210 -0.3559 5 6 1.5340 2.3428 0.4577 6 7 0.3845 2.2687 1.0945 7 14 2.3369 4.0046 0.1696 8 1 2.4914 4.2335 -1.2894 9 1 1.4848 5.0734 0.7504 10 1 3.6724 4.0283 0.8185 11 6 2.1975 -1.2687 -0.0006 12 6 2.4487 -1.7044 1.4201 13 6 1.6440 -2.4717 2.1603 14 7 2.0897 -2.7182 3.3765 15 6 3.2273 -2.2006 3.7018 16 17 4.0024 -2.3933 5.2431 17 16 3.8599 -1.2992 2.3940 18 1 -0.3633 0.0752 1.0249 19 1 -0.3633 0.8500 -0.5775 20 1 -0.3634 -0.9251 -0.4473 21 1 -0.0455 3.0772 1.4146 22 1 3.1498 -1.1382 -0.5144 23 1 1.6084 -2.0281 -0.5147 24 1 0.7048 -2.8579 1.7929 RHF calculation, no. of doubly occupied orbitals= 36 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000079318817.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 17:32:48 Heat of formation + Delta-G solvation = 62.818696 kcal Electronic energy + Delta-G solvation = -12035.202706 eV Core-core repulsion = 9716.438312 eV Total energy + Delta-G solvation = -2318.764394 eV No. of doubly occupied orbitals = 36 Molecular weight (most abundant/longest-lived isotopes) = 232.013 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -39.05335 -36.55847 -35.78123 -32.03861 -29.75658 -26.46354 -25.85026 -23.88955 -21.32147 -19.62130 -17.74712 -16.94035 -15.40781 -14.97573 -14.38771 -13.82527 -13.62599 -13.35301 -13.30931 -11.87563 -11.70073 -11.46240 -11.09191 -11.00059 -10.97774 -10.72437 -10.37151 -10.20024 -10.09923 -9.25649 -8.77989 -8.69848 -8.21818 -7.04858 -5.97115 -3.37613 1.12844 1.35304 2.27960 2.44007 3.26566 3.30593 3.33890 3.35171 4.32736 5.19512 5.23975 5.42418 5.72829 5.82603 6.25104 6.42803 6.59039 6.62851 7.20487 7.54543 7.61764 8.07138 8.13781 8.97248 9.57715 10.05693 11.05767 Molecular weight = 232.01amu Principal moments of inertia in cm(-1) A = 0.031878 B = 0.008431 C = 0.007489 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 878.147331 B = 3320.283040 C = 3737.680084 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.158 3.842 2 N -0.578 5.578 3 C -0.259 4.259 4 H 0.075 0.925 5 C 0.008 3.992 6 N -0.892 5.892 7 Si 0.910 3.090 8 H -0.280 1.280 9 H -0.288 1.288 10 H -0.279 1.279 11 C 0.208 3.792 12 C -0.183 4.183 13 C 0.010 3.990 14 N -0.459 5.459 15 C 0.028 3.972 16 Cl -0.005 7.005 17 S 0.177 5.823 18 H 0.032 0.968 19 H 0.052 0.948 20 H 0.004 0.996 21 H 0.259 0.741 22 H 0.062 0.938 23 H 0.069 0.931 24 H 0.171 0.829 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.231 -7.021 1.007 8.813 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 N -0.296 5.296 3 C -0.389 4.389 4 H 0.093 0.907 5 C -0.193 4.193 6 N -0.534 5.534 7 Si 0.739 3.261 8 H -0.206 1.206 9 H -0.214 1.214 10 H -0.205 1.205 11 C 0.078 3.922 12 C -0.310 4.310 13 C -0.141 4.141 14 N -0.176 5.176 15 C -0.274 4.274 16 Cl 0.022 6.978 17 S 0.426 5.574 18 H 0.050 0.950 19 H 0.071 0.929 20 H 0.022 0.978 21 H 0.069 0.931 22 H 0.080 0.920 23 H 0.088 0.912 24 H 0.188 0.812 Dipole moment (debyes) X Y Z Total from point charges 5.758 -6.621 1.476 8.898 hybrid contribution -0.566 0.690 0.285 0.936 sum 5.192 -5.931 1.761 8.077 Atomic orbital electron populations 1.20932 0.81644 0.96303 0.99795 1.44455 1.02463 1.00350 1.82375 1.19309 0.98732 0.84762 1.36113 0.90745 1.25182 0.97493 0.99133 0.97457 1.70065 1.17284 1.28001 1.38071 0.86247 0.78792 0.82908 0.78183 1.20610 1.21355 1.20464 1.19739 0.97161 0.88958 0.86362 1.28115 0.96199 1.00143 1.06532 1.21169 1.02106 1.03047 0.87818 1.65775 1.10938 1.22615 1.18243 1.26681 0.98613 1.06442 0.95700 1.98357 1.77320 1.96599 1.25510 1.84014 1.22040 1.47827 1.03556 0.94984 0.92939 0.97776 0.93120 0.91974 0.91243 0.81159 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.16 3.65 9.01 59.84 0.54 4.19 14 2 N -0.58 -13.55 2.91 -182.51 -0.53 -14.08 14 3 C -0.26 -6.63 9.67 -15.06 -0.15 -6.77 14 4 H 0.07 1.84 7.84 -52.49 -0.41 1.43 14 5 C 0.01 0.22 5.13 -17.43 -0.09 0.13 14 6 N -0.89 -24.87 10.59 55.49 0.59 -24.28 14 7 Si 0.91 20.82 29.57 -169.99 -5.03 15.79 14 8 H -0.28 -6.29 7.11 56.52 0.40 -5.88 14 9 H -0.29 -6.68 7.11 56.52 0.40 -6.28 14 10 H -0.28 -6.31 7.11 56.52 0.40 -5.91 14 11 C 0.21 3.96 6.24 -5.19 -0.03 3.93 14 12 C -0.18 -3.51 6.18 -35.94 -0.22 -3.73 14 13 C 0.01 0.18 11.25 -19.18 -0.22 -0.03 14 14 N -0.46 -9.12 10.55 -12.81 -0.14 -9.25 14 15 C 0.03 0.51 8.03 51.63 0.41 0.93 14 16 Cl -0.01 -0.08 29.33 -51.86 -1.52 -1.60 14 17 S 0.18 3.22 23.22 -107.50 -2.50 0.73 14 18 H 0.03 0.82 7.42 -51.93 -0.39 0.43 14 19 H 0.05 1.30 7.19 -51.93 -0.37 0.93 14 20 H 0.00 0.07 7.84 -51.93 -0.41 -0.33 14 21 H 0.26 7.03 8.31 -40.82 -0.34 6.69 14 22 H 0.06 1.12 8.03 -51.93 -0.42 0.70 14 23 H 0.07 1.15 7.86 -51.93 -0.41 0.74 14 24 H 0.17 2.90 8.06 -52.49 -0.42 2.47 14 LS Contribution 245.56 15.07 3.70 3.70 Total: -1.00 -28.25 245.56 -7.13 -35.38 By element: Atomic # 1 Polarization: -3.06 SS G_CDS: -1.96 Total: -5.02 kcal Atomic # 6 Polarization: -1.62 SS G_CDS: 0.25 Total: -1.37 kcal Atomic # 7 Polarization: -47.54 SS G_CDS: -0.08 Total: -47.61 kcal Atomic # 14 Polarization: 20.82 SS G_CDS: -5.03 Total: 15.79 kcal Atomic # 16 Polarization: 3.22 SS G_CDS: -2.50 Total: 0.73 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.52 Total: -1.60 kcal Total LS contribution 3.70 Total: 3.70 kcal Total: -28.25 -7.13 -35.38 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000079318817.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.203 kcal (2) G-P(sol) polarization free energy of solvation -28.251 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.952 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.133 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.384 kcal (6) G-S(sol) free energy of system = (1) + (5) 62.819 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds