Wall clock time and date at job start Mon Mar 30 2020 18:01:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17397 * 1 3 3 C 1.47206 * 179.97438 * 2 1 4 4 N 1.46499 * 109.47296 * 71.43068 * 3 2 1 5 5 C 1.36879 * 119.99353 * 276.29427 * 4 3 2 6 6 H 1.07998 * 119.99900 * 162.88197 * 5 4 3 7 7 C 1.39014 * 120.00203 * 342.87928 * 5 4 3 8 8 N 1.31394 * 119.99819 * 36.90333 * 7 5 4 9 9 Si 1.86798 * 119.99916 * 216.90234 * 7 5 4 10 10 H 1.48496 * 109.47470 * 0.02562 * 9 7 5 11 11 H 1.48502 * 109.46873 * 120.00338 * 9 7 5 12 12 H 1.48499 * 109.46775 * 239.99938 * 9 7 5 13 13 C 1.34770 * 120.00643 * 96.29443 * 4 3 2 14 14 O 1.21720 * 120.00373 * 188.23848 * 13 4 3 15 15 C 1.46663 * 119.99690 * 8.24109 * 13 4 3 16 16 C 1.36527 * 125.85952 * 156.96654 * 15 13 4 17 17 C 1.41247 * 107.03671 * 180.15438 * 16 15 13 18 18 C 1.43196 * 126.45030 * 179.83443 * 17 16 15 19 19 N 7.84146 * 119.62217 * 158.74178 * 2 1 3 20 20 C 1.38212 * 107.09927 * 359.56932 * 17 16 15 21 21 N 1.34465 * 108.39887 * 0.26807 * 20 17 16 22 22 H 0.97001 * 125.41246 * 180.02562 * 21 20 17 23 23 H 4.40640 * 5.51509 * 180.02562 * 4 1 2 24 24 H 1.08995 * 109.47006 * 311.42121 * 3 2 1 25 25 H 1.09007 * 109.46729 * 191.42544 * 3 2 1 26 26 H 0.96996 * 119.99746 * 179.97438 * 8 7 5 27 27 H 1.08001 * 126.47806 * 359.97438 * 16 15 13 28 28 H 1.08002 * 125.80228 * 180.29590 * 20 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1346 -0.4390 -1.3093 5 6 3.2408 -1.7751 -1.5866 6 1 3.3288 -2.1089 -2.6100 7 6 3.2353 -2.7026 -0.5511 8 7 2.4687 -2.5107 0.4986 9 14 4.3177 -4.2217 -0.6521 10 1 5.0797 -4.2027 -1.9265 11 1 5.2657 -4.2308 0.4909 12 1 3.4684 -5.4388 -0.6007 13 6 3.4795 0.4721 -2.2406 14 8 3.7413 0.1145 -3.3743 15 6 3.5395 1.8944 -1.8881 16 6 4.2653 2.8499 -2.5394 17 6 4.0373 4.0718 -1.8685 18 6 4.6000 5.3449 -2.2047 19 7 5.0498 6.3528 -2.4715 20 6 3.1641 3.8084 -0.8300 21 7 2.8681 2.4968 -0.8467 22 1 2.2756 2.0464 -0.2246 23 1 -1.0499 0.0001 -0.0003 24 1 3.0096 -0.6790 0.7706 25 1 3.0089 1.0082 0.2036 26 1 2.4646 -3.1580 1.2210 27 1 4.8968 2.6993 -3.4025 28 1 2.7838 4.5329 -0.1252 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491014271.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 18:01:08 Heat of formation + Delta-G solvation = 135.953889 kcal Electronic energy + Delta-G solvation = -16402.608031 eV Core-core repulsion = 13616.187517 eV Total energy + Delta-G solvation = -2786.420514 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 243.075 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -41.35988 -38.30883 -36.18164 -35.54178 -32.71160 -31.64268 -31.10987 -29.26725 -26.92706 -25.12714 -22.67122 -21.82026 -19.95132 -18.33550 -17.93209 -16.91152 -16.29245 -15.50395 -14.90151 -14.61669 -14.30008 -13.98829 -13.66642 -13.10811 -13.03026 -12.88971 -12.57006 -12.43520 -12.16342 -11.85364 -11.61387 -11.18579 -10.77002 -10.40196 -9.88122 -9.55634 -8.92894 -8.86795 -8.80912 -8.28605 -8.04240 -6.75841 -3.97567 1.77195 2.16996 2.91879 3.03147 3.16711 3.23075 3.24370 3.37453 3.54399 3.81922 3.94749 4.10724 4.36050 4.62805 4.81467 5.05830 5.10044 5.32411 5.54821 5.69515 6.04001 6.22587 6.55110 6.69903 6.76781 6.96554 7.31189 7.42109 7.82428 7.85076 8.18830 8.33149 8.87231 9.07102 9.63788 10.27024 Molecular weight = 243.07amu Principal moments of inertia in cm(-1) A = 0.031224 B = 0.006782 C = 0.006000 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 896.538393 B = 4127.796797 C = 4665.752865 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C -0.149 4.149 3 C 0.180 3.820 4 N -0.427 5.427 5 C -0.324 4.324 6 H 0.114 0.886 7 C 0.048 3.952 8 N -0.840 5.840 9 Si 0.909 3.091 10 H -0.262 1.262 11 H -0.276 1.276 12 H -0.282 1.282 13 C 0.503 3.497 14 O -0.566 6.566 15 C 0.001 3.999 16 C -0.092 4.092 17 C -0.138 4.138 18 C 0.302 3.698 19 N -0.456 5.456 20 C 0.061 3.939 21 N -0.532 5.532 22 H 0.431 0.569 23 H 0.207 0.793 24 H 0.145 0.855 25 H 0.071 0.929 26 H 0.273 0.727 27 H 0.154 0.846 28 H 0.179 0.821 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.814 5.606 4.763 7.576 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.252 4.252 2 C -0.150 4.150 3 C 0.057 3.943 4 N -0.144 5.144 5 C -0.450 4.450 6 H 0.132 0.868 7 C -0.159 4.159 8 N -0.476 5.476 9 Si 0.734 3.266 10 H -0.186 1.186 11 H -0.202 1.202 12 H -0.208 1.208 13 C 0.292 3.708 14 O -0.450 6.450 15 C -0.112 4.112 16 C -0.119 4.119 17 C -0.149 4.149 18 C -0.012 4.012 19 N -0.133 5.133 20 C -0.082 4.082 21 N -0.135 5.135 22 H 0.279 0.721 23 H 0.224 0.776 24 H 0.162 0.838 25 H 0.088 0.912 26 H 0.084 0.916 27 H 0.171 0.829 28 H 0.196 0.804 Dipole moment (debyes) X Y Z Total from point charges -1.141 6.688 4.056 7.904 hybrid contribution -0.455 -1.400 0.649 1.609 sum -1.596 5.288 4.705 7.256 Atomic orbital electron populations 1.24566 0.95591 1.03455 1.01553 1.23422 0.94529 0.97934 0.99139 1.19611 0.84223 0.99827 0.90653 1.43701 1.53414 1.06384 1.10911 1.19640 1.49928 0.79867 0.95539 0.86826 1.25340 0.95549 0.99890 0.95075 1.70164 1.30132 1.37147 1.10176 0.86177 0.80847 0.80351 0.79268 1.18617 1.20173 1.20798 1.16638 0.86038 0.82321 0.85797 1.90701 1.55851 1.79201 1.19197 1.20711 1.02689 0.94930 0.92823 1.20862 1.01601 0.88833 1.00564 1.15400 1.08447 0.88001 1.03075 1.24763 0.92217 0.91676 0.92592 1.81189 1.10938 1.11566 1.09643 1.22175 0.99874 0.86035 1.00147 1.43313 1.36711 1.07841 1.25651 0.72082 0.77610 0.83825 0.91203 0.91621 0.82868 0.80359 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.23 -4.08 19.25 29.55 0.57 -3.51 15 2 C -0.15 -2.88 11.54 -37.12 -0.43 -3.31 15 3 C 0.18 3.53 4.85 -6.83 -0.03 3.50 15 4 N -0.43 -9.93 2.60 -119.43 -0.31 -10.24 15 5 C -0.32 -8.29 9.22 -15.01 -0.14 -8.43 15 6 H 0.11 3.12 7.46 -52.49 -0.39 2.73 15 7 C 0.05 1.15 5.07 -17.45 -0.09 1.06 15 8 N -0.84 -19.69 9.75 55.50 0.54 -19.15 15 9 Si 0.91 18.84 29.68 -169.99 -5.04 13.80 15 10 H -0.26 -5.60 7.11 56.52 0.40 -5.20 15 11 H -0.28 -5.61 7.11 56.52 0.40 -5.21 15 12 H -0.28 -5.85 7.11 56.52 0.40 -5.44 15 13 C 0.50 11.56 7.54 -12.86 -0.10 11.46 15 14 O -0.57 -14.95 16.59 5.17 0.09 -14.87 15 15 C 0.00 0.02 6.50 -82.41 -0.54 -0.52 15 16 C -0.09 -1.52 10.62 -39.06 -0.41 -1.94 15 17 C -0.14 -1.95 5.97 -106.84 -0.64 -2.59 15 18 C 0.30 4.45 15.83 -22.49 -0.36 4.10 15 19 N -0.46 -7.46 18.53 41.82 0.78 -6.69 15 20 C 0.06 0.72 11.90 -16.41 -0.20 0.52 15 21 N -0.53 -7.55 4.81 -9.26 -0.04 -7.60 15 22 H 0.43 5.76 4.71 -40.82 -0.19 5.57 15 23 H 0.21 2.79 7.80 -54.10 -0.42 2.37 15 24 H 0.14 3.04 5.48 -51.93 -0.28 2.76 15 25 H 0.07 1.13 3.99 -51.93 -0.21 0.92 15 26 H 0.27 6.02 8.31 -40.82 -0.34 5.68 15 27 H 0.15 2.49 8.06 -52.49 -0.42 2.06 15 28 H 0.18 1.33 8.06 -52.49 -0.42 0.91 15 LS Contribution 265.41 15.07 4.00 4.00 Total: -1.00 -29.41 265.41 -3.83 -33.24 By element: Atomic # 1 Polarization: 8.63 SS G_CDS: -1.48 Total: 7.15 kcal Atomic # 6 Polarization: 2.71 SS G_CDS: -2.35 Total: 0.36 kcal Atomic # 7 Polarization: -44.64 SS G_CDS: 0.96 Total: -43.68 kcal Atomic # 8 Polarization: -14.95 SS G_CDS: 0.09 Total: -14.87 kcal Atomic # 14 Polarization: 18.84 SS G_CDS: -5.04 Total: 13.80 kcal Total LS contribution 4.00 Total: 4.00 kcal Total: -29.41 -3.83 -33.24 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491014271.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 169.198 kcal (2) G-P(sol) polarization free energy of solvation -29.413 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 139.784 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.831 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.244 kcal (6) G-S(sol) free energy of system = (1) + (5) 135.954 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds