Wall clock time and date at job start Mon Mar 30 2020 18:11:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17394 * 1 3 3 C 1.47204 * 179.97438 * 2 1 4 4 N 1.46501 * 109.47388 * 154.49743 * 3 2 1 5 5 C 1.36935 * 119.99930 * 89.99613 * 4 3 2 6 6 H 1.08000 * 119.99715 * 32.07328 * 5 4 3 7 7 C 1.38817 * 120.00208 * 212.34335 * 5 4 3 8 8 N 1.31612 * 119.99912 * 215.60757 * 7 5 4 9 9 Si 1.86798 * 119.99741 * 35.60297 * 7 5 4 10 10 H 1.48498 * 109.46948 * 95.43672 * 9 7 5 11 11 H 1.48504 * 109.47034 * 215.43571 * 9 7 5 12 12 H 1.48500 * 109.47185 * 335.43814 * 9 7 5 13 13 C 1.46498 * 119.99840 * 270.00319 * 4 3 2 14 14 C 1.50700 * 109.47172 * 273.12432 * 13 4 3 15 15 N 1.31131 * 126.54954 * 89.11474 * 14 13 4 16 16 C 1.34486 * 105.61840 * 179.97438 * 15 14 13 17 17 C 1.50704 * 126.29309 * 180.12637 * 16 15 14 18 18 C 1.52996 * 117.50176 * 188.90806 * 17 16 15 19 19 C 1.52995 * 117.49829 * 120.28501 * 17 16 15 20 20 N 1.29949 * 107.42093 * 0.34779 * 16 15 14 21 21 O 1.21301 * 110.25389 * 359.78525 * 20 16 15 22 22 H 4.40646 * 5.51595 * 180.02562 * 4 1 2 23 23 H 1.09005 * 109.47119 * 34.49743 * 3 2 1 24 24 H 1.09000 * 109.47398 * 274.49838 * 3 2 1 25 25 H 0.96999 * 120.00128 * 180.02562 * 8 7 5 26 26 H 1.09000 * 109.47815 * 33.12836 * 13 4 3 27 27 H 1.09006 * 109.47187 * 153.12805 * 13 4 3 28 28 H 1.08998 * 115.54537 * 334.62401 * 17 16 15 29 29 H 1.09005 * 117.49886 * 0.02562 * 18 17 16 30 30 H 1.09000 * 117.49751 * 145.01596 * 18 17 16 31 31 H 1.09000 * 117.50416 * 214.98031 * 19 17 16 32 32 H 1.09003 * 117.50108 * 359.97438 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1739 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1338 1.2475 -0.5947 5 6 3.3615 2.3408 0.1977 6 1 3.6909 2.2092 1.2178 7 6 3.1635 3.6182 -0.3083 8 7 3.9550 4.6025 0.0616 9 14 1.7738 3.9399 -1.5143 10 1 0.5856 4.4412 -0.7781 11 1 2.2056 4.9560 -2.5076 12 1 1.4254 2.6784 -2.2161 13 6 3.3779 1.3247 -2.0371 14 6 4.7770 0.8510 -2.3359 15 7 5.1471 -0.3814 -2.5880 16 6 6.4750 -0.3259 -2.7932 17 6 7.3761 -1.4881 -3.1226 18 6 8.8854 -1.2375 -3.1107 19 6 8.1522 -1.4291 -4.4398 20 7 6.8393 0.9133 -2.6507 21 8 5.8787 1.6057 -2.3876 22 1 -1.0502 -0.0001 0.0003 23 1 3.0097 -0.8462 -0.5821 24 1 3.0094 -0.0798 1.0245 25 1 3.8164 5.4952 -0.2917 26 1 2.6608 0.6930 -2.5614 27 1 3.2647 2.3564 -2.3701 28 1 7.0250 -2.4645 -2.7886 29 1 9.2267 -0.2320 -2.8642 30 1 9.5276 -2.0490 -2.7685 31 1 8.3122 -2.3667 -4.9722 32 1 8.0107 -0.5499 -5.0684 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000281480098.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 18:11:14 Heat of formation + Delta-G solvation = 181.402856 kcal Electronic energy + Delta-G solvation = -17462.187526 eV Core-core repulsion = 14623.114870 eV Total energy + Delta-G solvation = -2839.072656 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 247.106 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -44.84856 -37.52981 -36.72114 -34.63580 -32.77111 -32.07455 -30.95439 -27.61166 -26.27812 -24.82205 -23.00778 -22.43754 -21.83246 -20.06710 -17.67694 -17.56211 -17.22145 -16.79858 -15.43724 -15.23300 -14.71355 -14.60770 -14.12618 -13.49040 -13.10338 -12.62010 -12.39755 -12.09732 -11.81726 -11.73941 -11.57850 -11.26687 -10.79863 -10.70650 -10.47231 -10.39102 -10.34210 -9.84235 -9.73170 -9.45720 -9.14921 -8.75455 -7.44883 -6.30729 -3.59588 1.78506 2.65851 3.21506 3.35850 3.39329 3.45049 3.51064 3.62301 3.82592 3.94630 4.34073 4.54424 4.80114 4.80843 4.95095 4.99215 5.08128 5.25044 5.51738 5.67290 5.79094 5.86941 6.01181 6.07056 6.09956 6.13427 6.35087 6.40830 6.60059 6.62430 7.65013 8.07738 8.29856 8.64523 8.83559 9.41678 9.74088 10.82745 Molecular weight = 247.11amu Principal moments of inertia in cm(-1) A = 0.024687 B = 0.007167 C = 0.006131 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1133.913071 B = 3905.637280 C = 4565.825190 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.250 4.250 2 C -0.168 4.168 3 C 0.237 3.763 4 N -0.569 5.569 5 C -0.301 4.301 6 H 0.088 0.912 7 C 0.057 3.943 8 N -0.854 5.854 9 Si 0.840 3.160 10 H -0.283 1.283 11 H -0.286 1.286 12 H -0.260 1.260 13 C 0.227 3.773 14 C 0.193 3.807 15 N -0.501 5.501 16 C 0.184 3.816 17 C -0.069 4.069 18 C -0.161 4.161 19 C -0.161 4.161 20 N -0.398 5.398 21 O 0.086 5.914 22 H 0.205 0.795 23 H 0.076 0.924 24 H 0.083 0.917 25 H 0.269 0.731 26 H 0.091 0.909 27 H 0.090 0.910 28 H 0.130 0.870 29 H 0.103 0.897 30 H 0.103 0.897 31 H 0.104 0.896 32 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.607 -10.258 -6.526 12.435 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.268 4.268 2 C -0.171 4.171 3 C 0.112 3.888 4 N -0.288 5.288 5 C -0.428 4.428 6 H 0.105 0.895 7 C -0.149 4.149 8 N -0.490 5.490 9 Si 0.665 3.335 10 H -0.210 1.210 11 H -0.213 1.213 12 H -0.184 1.184 13 C 0.096 3.904 14 C -0.030 4.030 15 N -0.237 5.237 16 C -0.088 4.088 17 C -0.088 4.088 18 C -0.199 4.199 19 C -0.199 4.199 20 N -0.108 5.108 21 O 0.030 5.970 22 H 0.222 0.778 23 H 0.094 0.906 24 H 0.101 0.899 25 H 0.079 0.921 26 H 0.109 0.891 27 H 0.108 0.892 28 H 0.148 0.852 29 H 0.122 0.878 30 H 0.122 0.878 31 H 0.122 0.878 32 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 3.461 -10.183 -6.612 12.624 hybrid contribution -1.265 0.529 -0.453 1.444 sum 2.196 -9.654 -7.065 12.163 Atomic orbital electron populations 1.24717 0.95783 1.02941 1.03399 1.24857 0.95926 0.98094 0.98176 1.18260 0.82039 0.89111 0.99386 1.44120 1.71292 1.10747 1.02609 1.18711 1.43380 0.82663 0.98036 0.89484 1.25350 0.96835 0.95409 0.97285 1.70077 1.32671 1.02318 1.43977 0.87481 0.85904 0.78423 0.81654 1.21001 1.21268 1.18416 1.20312 0.82096 1.01032 0.86948 1.31238 0.95421 0.84710 0.91592 1.71782 1.09529 1.20844 1.21504 1.24645 0.89896 0.92659 1.01643 1.19936 0.90899 0.94596 1.03400 1.23042 0.92401 1.04061 1.00423 1.23030 1.02709 1.03738 0.90433 1.74485 1.10981 1.05100 1.20268 1.85365 1.12834 1.36140 1.62660 0.77752 0.90563 0.89942 0.92069 0.89096 0.89242 0.85175 0.87824 0.87818 0.87780 0.88587 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.25 -4.35 19.25 29.55 0.57 -3.78 16 2 C -0.17 -3.24 13.68 -37.12 -0.51 -3.75 16 3 C 0.24 4.60 6.16 -6.83 -0.04 4.55 16 4 N -0.57 -12.81 2.08 -177.94 -0.37 -13.18 16 5 C -0.30 -7.89 9.81 -15.06 -0.15 -8.04 16 6 H 0.09 2.46 8.06 -52.49 -0.42 2.03 16 7 C 0.06 1.52 5.03 -17.43 -0.09 1.43 16 8 N -0.85 -24.38 13.97 55.49 0.78 -23.60 16 9 Si 0.84 19.93 26.18 -169.99 -4.45 15.48 16 10 H -0.28 -6.92 7.11 56.52 0.40 -6.52 16 11 H -0.29 -6.77 7.11 56.52 0.40 -6.37 16 12 H -0.26 -5.78 5.84 56.52 0.33 -5.45 16 13 C 0.23 4.73 4.62 -5.19 -0.02 4.71 16 14 C 0.19 4.04 8.10 -13.06 -0.11 3.93 16 15 N -0.50 -9.91 11.55 -9.87 -0.11 -10.02 16 16 C 0.18 3.42 7.74 -156.38 -1.21 2.21 16 17 C -0.07 -0.95 6.33 -91.77 -0.58 -1.53 16 18 C -0.16 -1.89 10.14 -26.74 -0.27 -2.16 16 19 C -0.16 -1.81 10.23 -26.74 -0.27 -2.08 16 20 N -0.40 -8.19 11.77 30.90 0.36 -7.83 16 21 O 0.09 1.91 11.31 18.11 0.20 2.12 16 22 H 0.21 2.76 7.80 -54.08 -0.42 2.33 16 23 H 0.08 1.35 8.07 -51.93 -0.42 0.93 16 24 H 0.08 1.56 8.04 -51.93 -0.42 1.14 16 25 H 0.27 7.23 8.31 -40.82 -0.34 6.89 16 26 H 0.09 1.69 8.10 -51.93 -0.42 1.27 16 27 H 0.09 1.95 4.07 -51.93 -0.21 1.74 16 28 H 0.13 1.60 8.14 -51.93 -0.42 1.17 16 29 H 0.10 1.38 7.91 -51.93 -0.41 0.97 16 30 H 0.10 0.94 8.14 -51.93 -0.42 0.52 16 31 H 0.10 0.89 8.14 -51.93 -0.42 0.47 16 32 H 0.10 1.17 8.14 -51.93 -0.42 0.75 16 LS Contribution 290.93 15.07 4.38 4.38 Total: -1.00 -29.74 290.93 -5.51 -35.25 By element: Atomic # 1 Polarization: 5.52 SS G_CDS: -3.62 Total: 1.90 kcal Atomic # 6 Polarization: -1.82 SS G_CDS: -2.68 Total: -4.50 kcal Atomic # 7 Polarization: -55.29 SS G_CDS: 0.65 Total: -54.63 kcal Atomic # 8 Polarization: 1.91 SS G_CDS: 0.20 Total: 2.12 kcal Atomic # 14 Polarization: 19.93 SS G_CDS: -4.45 Total: 15.48 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -29.74 -5.51 -35.25 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000281480098.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 216.657 kcal (2) G-P(sol) polarization free energy of solvation -29.743 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 186.914 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.511 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.255 kcal (6) G-S(sol) free energy of system = (1) + (5) 181.403 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds