Wall clock time and date at job start Mon Mar 30 2020 19:09:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43200 * 179.97438 * 2 1 4 4 C 1.39810 * 120.06009 * 120.41632 * 3 2 1 5 5 C 1.37950 * 120.16660 * 180.02562 * 4 3 2 6 6 C 1.38306 * 120.28766 * 359.97438 * 5 4 3 7 7 Cl 1.73597 * 119.93783 * 179.97438 * 6 5 4 8 8 C 1.39822 * 120.12043 * 359.97438 * 6 5 4 9 9 C 1.47786 * 120.08009 * 179.97438 * 8 6 5 10 10 O 1.21559 * 120.00226 * 0.02562 * 9 8 6 11 11 N 1.34774 * 119.99692 * 180.02562 * 9 8 6 12 12 C 1.46506 * 120.00072 * 180.02562 * 11 9 8 13 13 C 1.50703 * 109.47289 * 179.97438 * 12 11 9 14 14 H 1.07994 * 119.99399 * 0.02562 * 13 12 11 15 15 C 1.37874 * 119.99789 * 179.97438 * 13 12 11 16 16 N 1.31518 * 120.00144 * 0.02562 * 15 13 12 17 17 Si 1.86803 * 119.99733 * 179.97438 * 15 13 12 18 18 H 1.48490 * 109.47181 * 0.02562 * 17 15 13 19 19 H 1.48498 * 109.46716 * 120.00463 * 17 15 13 20 20 H 1.48500 * 109.46999 * 240.00161 * 17 15 13 21 21 C 1.39333 * 119.83460 * 0.25824 * 8 6 5 22 22 H 1.08004 * 119.91712 * 0.02562 * 4 3 2 23 23 H 1.07997 * 119.85695 * 179.97438 * 5 4 3 24 24 H 0.97001 * 120.00676 * 359.97438 * 11 9 8 25 25 H 1.09001 * 109.47060 * 300.00359 * 12 11 9 26 26 H 1.09004 * 109.47073 * 59.99848 * 12 11 9 27 27 H 0.96997 * 119.99752 * 179.97438 * 16 15 13 28 28 H 1.08001 * 120.14632 * 179.72593 * 21 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2680 0.6136 -1.0435 5 6 4.6475 0.6150 -1.0460 6 6 5.3476 0.0114 -0.0172 7 17 7.0835 0.0180 -0.0298 8 6 4.6596 -0.6042 1.0329 9 6 5.4085 -1.2495 2.1315 10 8 6.6241 -1.2451 2.1231 11 7 4.7437 -1.8428 3.1427 12 6 5.4861 -2.4820 4.2320 13 6 4.5157 -3.0650 5.2268 14 1 3.4525 -2.9693 5.0636 15 6 4.9854 -3.7214 6.3446 16 7 6.2803 -3.8383 6.5430 17 14 3.7826 -4.4434 7.5781 18 1 2.3927 -4.1781 7.1277 19 1 3.9982 -5.9091 7.6799 20 1 4.0008 -3.8175 8.9069 21 6 3.2663 -0.6129 1.0381 22 1 2.7274 1.0871 -1.8497 23 1 5.1832 1.0896 -1.8548 24 1 3.7738 -1.8460 3.1496 25 1 6.1132 -3.2764 3.8272 26 1 6.1132 -1.7412 4.7280 27 1 6.6107 -4.2998 7.3296 28 1 2.7299 -1.0908 1.8444 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000334450607.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 19:09:51 Heat of formation + Delta-G solvation = 15.188189 kcal Electronic energy + Delta-G solvation = -16248.346715 eV Core-core repulsion = 13290.541667 eV Total energy + Delta-G solvation = -2957.805049 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 264.041 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -40.18807 -38.30395 -36.82454 -36.18040 -34.33806 -32.61309 -31.50748 -31.38552 -27.37203 -24.39297 -23.90497 -22.58560 -20.40010 -19.09656 -17.21275 -16.77140 -16.28318 -15.60130 -14.96608 -14.84641 -14.56814 -14.20285 -14.09675 -13.64832 -13.17065 -13.06531 -12.97576 -12.33113 -12.02215 -11.89396 -11.83079 -11.41831 -11.13741 -10.94780 -10.90060 -10.32131 -9.43879 -9.43137 -9.05320 -8.98639 -8.79083 -7.97696 -6.21150 -4.28383 0.25131 0.66353 2.06115 2.39325 2.41325 3.21367 3.27050 3.28886 3.31469 3.51546 3.79406 3.83690 4.30464 4.36690 4.49041 4.87373 4.95599 5.15570 5.24645 5.42283 5.49230 5.76144 5.87123 6.16325 7.20288 7.22175 7.28229 7.45126 7.58730 7.90699 8.47531 8.68941 8.93167 9.38235 10.88921 Molecular weight = 264.04amu Principal moments of inertia in cm(-1) A = 0.018512 B = 0.005380 C = 0.004178 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1512.173268 B = 5203.064642 C = 6700.093289 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.411 5.411 2 C 0.256 3.744 3 C -0.035 4.035 4 C -0.044 4.044 5 C -0.122 4.122 6 C 0.035 3.965 7 Cl -0.017 7.017 8 C -0.115 4.115 9 C 0.533 3.467 10 O -0.523 6.523 11 N -0.703 5.703 12 C 0.250 3.750 13 C -0.545 4.545 14 H 0.064 0.936 15 C 0.065 3.935 16 N -0.884 5.884 17 Si 0.903 3.097 18 H -0.272 1.272 19 H -0.282 1.282 20 H -0.282 1.282 21 C -0.029 4.029 22 H 0.144 0.856 23 H 0.149 0.851 24 H 0.389 0.611 25 H 0.031 0.969 26 H 0.031 0.969 27 H 0.266 0.734 28 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.044 8.914 -15.199 18.078 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.086 5.086 2 C -0.059 4.059 3 C -0.038 4.038 4 C -0.065 4.065 5 C -0.141 4.141 6 C 0.006 3.994 7 Cl 0.013 6.987 8 C -0.120 4.120 9 C 0.317 3.683 10 O -0.401 6.401 11 N -0.352 5.352 12 C 0.130 3.870 13 C -0.584 4.584 14 H 0.082 0.918 15 C -0.139 4.139 16 N -0.521 5.521 17 Si 0.730 3.270 18 H -0.196 1.196 19 H -0.208 1.208 20 H -0.208 1.208 21 C -0.050 4.050 22 H 0.162 0.838 23 H 0.167 0.833 24 H 0.222 0.778 25 H 0.049 0.951 26 H 0.049 0.951 27 H 0.076 0.924 28 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -4.611 8.805 -15.016 18.008 hybrid contribution -0.523 -0.452 0.771 1.035 sum -5.134 8.354 -14.245 17.293 Atomic orbital electron populations 1.81278 1.11886 1.08127 1.07304 1.25505 0.92396 0.93949 0.94059 1.15882 0.84661 1.05065 0.98239 1.21227 0.93440 0.95393 0.96427 1.20988 0.93532 1.01014 0.98572 1.21356 0.87511 0.96188 0.94386 1.98447 1.06102 1.96317 1.97857 1.20112 0.93000 1.01788 0.97051 1.17948 0.87628 0.80378 0.82331 1.90852 1.12562 1.59271 1.77437 1.46461 1.10234 1.55001 1.23457 1.19186 0.92225 0.92830 0.82758 1.21236 0.92996 1.37367 1.06762 0.91834 1.24934 0.95385 0.95719 0.97856 1.69978 1.12254 1.41667 1.28192 0.86369 0.80887 0.78853 0.80872 1.19624 1.20763 1.20757 1.21428 0.92508 0.94482 0.96623 0.83800 0.83348 0.77756 0.95098 0.95105 0.92432 0.83494 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.41 -5.34 18.54 41.84 0.78 -4.57 15 2 C 0.26 2.75 15.32 -22.47 -0.34 2.41 15 3 C -0.03 -0.33 5.73 -106.97 -0.61 -0.94 15 4 C -0.04 -0.32 9.74 -39.10 -0.38 -0.70 15 5 C -0.12 -1.02 9.80 -39.66 -0.39 -1.40 15 6 C 0.03 0.42 6.36 -38.96 -0.25 0.18 15 7 Cl -0.02 -0.24 25.99 -51.86 -1.35 -1.59 15 8 C -0.12 -1.59 5.87 -104.99 -0.62 -2.21 15 9 C 0.53 9.98 7.76 -12.36 -0.10 9.88 15 10 O -0.52 -11.53 13.94 5.31 0.07 -11.46 15 11 N -0.70 -13.89 5.50 -62.44 -0.34 -14.23 15 12 C 0.25 6.32 5.43 -5.19 -0.03 6.29 15 13 C -0.55 -14.30 9.28 -34.44 -0.32 -14.62 15 14 H 0.06 1.56 7.60 -52.49 -0.40 1.16 15 15 C 0.07 1.76 5.46 -17.82 -0.10 1.66 15 16 N -0.88 -25.42 13.29 55.43 0.74 -24.68 15 17 Si 0.90 20.48 29.54 -169.99 -5.02 15.46 15 18 H -0.27 -5.98 7.11 56.52 0.40 -5.58 15 19 H -0.28 -6.37 7.11 56.52 0.40 -5.97 15 20 H -0.28 -6.37 7.11 56.52 0.40 -5.97 15 21 C -0.03 -0.32 9.24 -38.76 -0.36 -0.68 15 22 H 0.14 0.64 8.06 -52.48 -0.42 0.21 15 23 H 0.15 0.84 8.06 -52.49 -0.42 0.41 15 24 H 0.39 6.49 6.35 -40.82 -0.26 6.23 15 25 H 0.03 0.86 8.14 -51.93 -0.42 0.44 15 26 H 0.03 0.86 8.14 -51.93 -0.42 0.44 15 27 H 0.27 7.17 8.31 -40.82 -0.34 6.83 15 28 H 0.15 1.48 6.40 -52.49 -0.34 1.15 15 LS Contribution 279.15 15.07 4.21 4.21 Total: -1.00 -31.39 279.15 -6.23 -37.62 By element: Atomic # 1 Polarization: 1.19 SS G_CDS: -1.82 Total: -0.63 kcal Atomic # 6 Polarization: 3.36 SS G_CDS: -3.49 Total: -0.13 kcal Atomic # 7 Polarization: -44.65 SS G_CDS: 1.17 Total: -43.48 kcal Atomic # 8 Polarization: -11.53 SS G_CDS: 0.07 Total: -11.46 kcal Atomic # 14 Polarization: 20.48 SS G_CDS: -5.02 Total: 15.46 kcal Atomic # 17 Polarization: -0.24 SS G_CDS: -1.35 Total: -1.59 kcal Total LS contribution 4.21 Total: 4.21 kcal Total: -31.39 -6.23 -37.62 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000334450607.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.803 kcal (2) G-P(sol) polarization free energy of solvation -31.387 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.417 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.229 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.615 kcal (6) G-S(sol) free energy of system = (1) + (5) 15.188 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds