Wall clock time and date at job start Mon Mar 30 2020 19:43:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35922 * 117.00342 * 2 1 4 4 C 1.38520 * 120.08742 * 0.02562 * 3 2 1 5 5 C 1.38364 * 120.01573 * 179.97438 * 4 3 2 6 6 Cl 1.73599 * 119.90122 * 179.97438 * 5 4 3 7 7 C 1.38532 * 120.19633 * 0.02562 * 5 4 3 8 8 C 1.50698 * 119.90768 * 179.97438 * 7 5 4 9 9 C 1.38067 * 120.18340 * 0.02562 * 7 5 4 10 10 C 1.38954 * 119.97987 * 359.70222 * 9 7 5 11 11 N 1.39563 * 120.09883 * 180.27693 * 10 9 7 12 12 C 1.34779 * 119.99738 * 24.84382 * 11 10 9 13 13 O 1.21777 * 120.00388 * 5.52657 * 12 11 10 14 14 C 1.41781 * 119.99573 * 185.53047 * 12 11 10 15 15 H 1.07998 * 120.00198 * 359.97438 * 14 12 11 16 16 C 1.40139 * 119.99460 * 179.97438 * 14 12 11 17 17 N 1.30630 * 120.00588 * 0.02562 * 16 14 12 18 18 Si 1.86809 * 119.99707 * 179.97438 * 16 14 12 19 19 H 1.48501 * 109.46818 * 90.00197 * 18 16 14 20 20 H 1.48497 * 109.46890 * 210.00137 * 18 16 14 21 21 H 1.48497 * 109.47031 * 330.00588 * 18 16 14 22 22 H 1.09003 * 109.47543 * 179.97438 * 1 2 3 23 23 H 1.09006 * 109.47495 * 59.99489 * 1 2 3 24 24 H 1.09000 * 109.47237 * 299.99634 * 1 2 3 25 25 H 1.07998 * 119.99255 * 359.97438 * 4 3 2 26 26 H 1.08995 * 109.47272 * 89.99824 * 8 7 5 27 27 H 1.08994 * 109.47173 * 209.99978 * 8 7 5 28 28 H 1.09009 * 109.47110 * 330.00219 * 8 7 5 29 29 H 1.07998 * 120.00552 * 179.97438 * 9 7 5 30 30 H 0.96997 * 120.00157 * 204.84940 * 11 10 9 31 31 H 0.96995 * 120.00288 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0461 1.2110 0.0000 4 6 1.2935 2.3740 0.0005 5 6 1.9232 3.6060 0.0011 6 17 0.9772 5.0615 0.0011 7 6 3.3065 3.6814 0.0005 8 6 3.9856 5.0267 0.0005 9 6 4.0646 2.5275 -0.0011 10 6 3.4399 1.2863 0.0041 11 7 4.2039 0.1183 0.0083 12 6 5.4594 0.1361 0.4981 13 8 5.8921 1.1434 1.0282 14 6 6.2765 -1.0181 0.3960 15 1 5.8926 -1.9117 -0.0737 16 6 7.5821 -0.9995 0.9048 17 7 8.0462 0.0811 1.4735 18 14 8.6585 -2.5204 0.7710 19 1 9.4200 -2.4773 -0.5031 20 1 9.6065 -2.5579 1.9133 21 1 7.8044 -3.7350 0.7964 22 1 -0.3634 -1.0277 -0.0005 23 1 -0.3634 0.5139 -0.8900 24 1 -0.3634 0.5138 0.8900 25 1 0.2149 2.3190 0.0005 26 1 4.1498 5.3508 1.0281 27 1 4.9436 4.9500 -0.5137 28 1 3.3546 5.7523 -0.5129 29 1 5.1428 2.5896 -0.0019 30 1 3.8313 -0.7062 -0.3412 31 1 8.9498 0.0939 1.8259 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000003263949.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 19:43:39 Heat of formation + Delta-G solvation = -60.709053 kcal Electronic energy + Delta-G solvation = -18092.971435 eV Core-core repulsion = 14979.533616 eV Total energy + Delta-G solvation = -3113.437819 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 269.061 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -40.04264 -37.94410 -37.18841 -35.80092 -33.63419 -32.50953 -31.35740 -29.24415 -27.62401 -26.49461 -25.50957 -22.49740 -21.04588 -19.77421 -17.96613 -17.51660 -16.12226 -15.86807 -15.55203 -15.21653 -14.43726 -14.12263 -13.86554 -13.75490 -13.40695 -12.81097 -12.65185 -12.13566 -12.02236 -11.63291 -11.54953 -11.49718 -11.37641 -11.13023 -10.99563 -10.64976 -10.50863 -10.36207 -10.30867 -9.31491 -8.90263 -8.07253 -7.67465 -6.84785 -6.40872 -4.93582 1.71991 1.80016 2.52038 3.03817 3.11481 3.15026 3.53564 3.94981 4.04003 4.44140 4.57813 5.10558 5.19366 5.26200 5.33333 5.52838 5.60999 5.69645 5.73964 6.02093 6.05701 6.23265 6.38732 6.42646 6.64032 6.92435 7.19039 7.27520 7.54887 7.82823 8.00567 8.15722 8.76728 9.23869 10.33415 10.52839 Molecular weight = 269.06amu Principal moments of inertia in cm(-1) A = 0.025772 B = 0.005343 C = 0.004483 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1086.191302 B = 5239.467027 C = 6243.759203 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.314 6.314 3 C 0.064 3.936 4 C -0.172 4.172 5 C -0.052 4.052 6 Cl -0.091 7.091 7 C -0.083 4.083 8 C -0.109 4.109 9 C -0.105 4.105 10 C 0.187 3.813 11 N -0.686 5.686 12 C 0.542 3.458 13 O -0.565 6.565 14 C -0.535 4.535 15 H 0.071 0.929 16 C 0.088 3.912 17 N -0.746 5.746 18 Si 0.913 3.087 19 H -0.269 1.269 20 H -0.277 1.277 21 H -0.263 1.263 22 H 0.095 0.905 23 H 0.050 0.950 24 H 0.051 0.949 25 H 0.130 0.870 26 H 0.069 0.931 27 H 0.068 0.932 28 H 0.065 0.935 29 H 0.169 0.831 30 H 0.398 0.602 31 H 0.273 0.727 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.314 3.030 -3.713 12.287 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.228 6.228 3 C 0.016 3.984 4 C -0.192 4.192 5 C -0.080 4.080 6 Cl -0.063 7.063 7 C -0.085 4.085 8 C -0.165 4.165 9 C -0.126 4.126 10 C 0.086 3.914 11 N -0.327 5.327 12 C 0.352 3.648 13 O -0.450 6.450 14 C -0.570 4.570 15 H 0.090 0.910 16 C -0.135 4.135 17 N -0.373 5.373 18 Si 0.737 3.263 19 H -0.194 1.194 20 H -0.202 1.202 21 H -0.187 1.187 22 H 0.114 0.886 23 H 0.069 0.931 24 H 0.070 0.930 25 H 0.148 0.852 26 H 0.088 0.912 27 H 0.087 0.913 28 H 0.084 0.916 29 H 0.186 0.814 30 H 0.231 0.769 31 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -10.733 3.678 -3.230 11.796 hybrid contribution -0.213 -0.981 -0.156 1.016 sum -10.946 2.697 -3.385 11.771 Atomic orbital electron populations 1.22955 0.79154 1.03376 1.00938 1.86026 1.20635 1.26332 1.89788 1.18572 0.90634 0.84124 1.05096 1.20595 0.99464 0.90259 1.08900 1.20215 0.90732 0.86031 1.11037 1.98291 1.72800 1.37820 1.97347 1.19581 0.90803 0.96469 1.01597 1.20738 1.00340 0.93015 1.02456 1.21434 1.02454 0.88303 1.00412 1.17509 0.86492 0.89390 0.98023 1.44096 1.16213 1.08720 1.63700 1.17084 0.78648 0.90204 0.78896 1.90593 1.71890 1.34922 1.47548 1.20061 0.97985 0.99111 1.39815 0.91049 1.25761 0.98038 0.96908 0.92792 1.69997 1.15581 1.26928 1.24830 0.86267 0.79674 0.81758 0.78560 1.19449 1.20211 1.18656 0.88623 0.93094 0.93034 0.85223 0.91193 0.91282 0.91602 0.81428 0.76871 0.91563 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.35 9.81 101.05 0.99 1.34 16 2 O -0.31 -5.20 9.91 -19.50 -0.19 -5.39 16 3 C 0.06 1.17 6.71 -38.97 -0.26 0.91 16 4 C -0.17 -2.82 8.81 -39.43 -0.35 -3.17 16 5 C -0.05 -0.88 6.32 -39.43 -0.25 -1.13 16 6 Cl -0.09 -1.30 27.27 -51.86 -1.41 -2.71 16 7 C -0.08 -1.52 5.88 -104.58 -0.62 -2.13 16 8 C -0.11 -1.68 9.61 36.00 0.35 -1.33 16 9 C -0.10 -2.25 8.36 -39.38 -0.33 -2.58 16 10 C 0.19 4.04 6.45 -83.57 -0.54 3.50 16 11 N -0.69 -15.84 5.26 -12.30 -0.06 -15.90 16 12 C 0.54 14.87 7.37 -14.90 -0.11 14.76 16 13 O -0.57 -17.13 12.03 5.12 0.06 -17.07 16 14 C -0.53 -14.40 9.31 -37.52 -0.35 -14.75 16 15 H 0.07 1.76 7.85 -52.49 -0.41 1.35 16 16 C 0.09 2.33 5.50 -17.35 -0.10 2.23 16 17 N -0.75 -21.07 11.73 55.56 0.65 -20.42 16 18 Si 0.91 19.07 29.56 -169.99 -5.02 14.05 16 19 H -0.27 -5.50 7.11 56.52 0.40 -5.10 16 20 H -0.28 -5.67 7.11 56.52 0.40 -5.27 16 21 H -0.26 -5.33 7.11 56.52 0.40 -4.93 16 22 H 0.10 0.85 8.14 -51.93 -0.42 0.43 16 23 H 0.05 0.51 7.66 -51.93 -0.40 0.11 16 24 H 0.05 0.54 7.66 -51.93 -0.40 0.15 16 25 H 0.13 1.76 6.30 -52.49 -0.33 1.43 16 26 H 0.07 1.04 8.14 -51.93 -0.42 0.62 16 27 H 0.07 1.03 8.08 -51.93 -0.42 0.61 16 28 H 0.07 0.90 6.89 -51.92 -0.36 0.54 16 29 H 0.17 4.09 5.78 -52.49 -0.30 3.78 16 30 H 0.40 8.24 8.30 -40.82 -0.34 7.90 16 31 H 0.27 6.96 8.29 -40.82 -0.34 6.63 16 LS Contribution 284.32 15.07 4.28 4.28 Total: -1.00 -31.05 284.32 -6.19 -37.24 By element: Atomic # 1 Polarization: 11.19 SS G_CDS: -2.94 Total: 8.26 kcal Atomic # 6 Polarization: -0.78 SS G_CDS: -1.56 Total: -2.34 kcal Atomic # 7 Polarization: -36.91 SS G_CDS: 0.59 Total: -36.32 kcal Atomic # 8 Polarization: -22.33 SS G_CDS: -0.13 Total: -22.46 kcal Atomic # 14 Polarization: 19.07 SS G_CDS: -5.02 Total: 14.05 kcal Atomic # 17 Polarization: -1.30 SS G_CDS: -1.41 Total: -2.71 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -31.05 -6.19 -37.24 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000003263949.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.467 kcal (2) G-P(sol) polarization free energy of solvation -31.047 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.514 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.195 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.242 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.709 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds