Wall clock time and date at job start Mon Mar 30 2020 20:35:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53001 * 109.47017 * 2 1 4 4 C 1.50706 * 109.46941 * 119.99962 * 2 1 3 5 5 N 1.30456 * 125.73754 * 299.97118 * 4 2 1 6 6 C 1.34274 * 109.41838 * 180.02562 * 5 4 2 7 7 C 1.34751 * 108.27419 * 0.02562 * 6 5 4 8 8 Cl 1.73604 * 126.59231 * 179.97438 * 7 6 5 9 9 N 1.36366 * 125.73479 * 120.00244 * 4 2 1 10 10 C 1.37579 * 126.51471 * 0.02562 * 9 4 2 11 11 H 1.07995 * 120.00470 * 36.08048 * 10 9 4 12 12 C 1.38934 * 119.99658 * 216.07997 * 10 9 4 13 13 N 1.31347 * 120.00005 * 20.42134 * 12 10 9 14 14 Si 1.86796 * 120.00270 * 200.41890 * 12 10 9 15 15 H 1.48500 * 109.46783 * 60.00119 * 14 12 10 16 16 H 1.48497 * 109.47213 * 179.97438 * 14 12 10 17 17 H 1.48497 * 109.47069 * 300.00413 * 14 12 10 18 18 H 1.09002 * 109.47549 * 299.99876 * 1 2 3 19 19 H 1.08999 * 109.47431 * 60.00390 * 1 2 3 20 20 H 1.09001 * 109.46694 * 180.02562 * 1 2 3 21 21 H 1.08995 * 109.46924 * 239.99933 * 2 1 3 22 22 H 1.09002 * 109.46860 * 59.99702 * 3 2 1 23 23 H 1.08993 * 109.46955 * 180.02562 * 3 2 1 24 24 H 1.08999 * 109.46701 * 300.00057 * 3 2 1 25 25 H 1.08000 * 125.86368 * 180.27091 * 6 5 4 26 26 H 0.96988 * 120.00074 * 179.97438 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0323 -0.7104 1.2305 5 7 1.7875 -0.3634 2.4640 6 6 2.3952 -1.2222 3.2984 7 6 3.0456 -2.1415 2.5584 8 17 3.9878 -3.4720 3.1550 9 7 2.8196 -1.8238 1.2417 10 6 3.2980 -2.4993 0.1428 11 1 3.5870 -1.9534 -0.7430 12 6 3.4091 -3.8839 0.1727 13 7 2.7133 -4.5800 1.0425 14 14 4.5481 -4.7555 -1.0241 15 1 5.9396 -4.2794 -0.8191 16 1 4.4868 -6.2203 -0.7882 17 1 4.1237 -4.4596 -2.4161 18 1 -0.3634 0.5138 0.8900 19 1 -0.3634 0.5138 -0.8900 20 1 -0.3633 -1.0277 0.0005 21 1 1.8933 -0.5138 -0.8899 22 1 1.6766 1.9563 0.8900 23 1 3.1299 1.4425 -0.0005 24 1 1.6766 1.9563 -0.8900 25 1 2.3644 -1.1850 4.3773 26 1 2.7907 -5.5465 1.0631 RHF calculation, no. of doubly occupied orbitals= 36 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259995360.mol2 26 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 20:35:15 Heat of formation + Delta-G solvation = 32.005489 kcal Electronic energy + Delta-G solvation = -12551.659026 eV Core-core repulsion = 10270.632365 eV Total energy + Delta-G solvation = -2281.026661 eV No. of doubly occupied orbitals = 36 Molecular weight (most abundant/longest-lived isotopes) = 214.057 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -40.54178 -35.25290 -34.35688 -33.90901 -30.98285 -27.24185 -26.52171 -25.22133 -21.82203 -20.42679 -18.63544 -17.43150 -15.69481 -14.72425 -14.21573 -13.97311 -13.50777 -12.85596 -12.58538 -12.34804 -11.85979 -11.58467 -11.40905 -11.08339 -10.78772 -10.66997 -10.63614 -10.32890 -10.21549 -10.01843 -9.24330 -8.68883 -8.16201 -6.83682 -6.76276 -4.55117 2.93436 3.05484 3.07180 3.31162 3.53848 3.87924 4.30526 4.75547 4.97242 5.49649 5.75932 5.87953 6.06488 6.17470 6.34972 6.45822 6.49751 6.74115 6.78556 6.89919 7.01480 7.10815 7.40006 8.00540 8.13148 8.69751 9.27437 9.48886 10.24473 Molecular weight = 214.06amu Principal moments of inertia in cm(-1) A = 0.028699 B = 0.014563 C = 0.010782 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 975.426206 B = 1922.173315 C = 2596.264056 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C 0.010 3.990 3 C -0.134 4.134 4 C 0.137 3.863 5 N -0.500 5.500 6 C -0.063 4.063 7 C 0.031 3.969 8 Cl -0.038 7.038 9 N -0.249 5.249 10 C -0.375 4.375 11 H 0.108 0.892 12 C 0.065 3.935 13 N -0.802 5.802 14 Si 0.924 3.076 15 H -0.265 1.265 16 H -0.278 1.278 17 H -0.267 1.267 18 H 0.059 0.941 19 H 0.048 0.952 20 H 0.052 0.948 21 H 0.079 0.921 22 H 0.060 0.940 23 H 0.048 0.952 24 H 0.049 0.951 25 H 0.151 0.849 26 H 0.281 0.719 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.611 2.742 -2.073 3.491 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 C -0.011 4.011 3 C -0.192 4.192 4 C -0.120 4.120 5 N -0.221 5.221 6 C -0.217 4.217 7 C -0.118 4.118 8 Cl -0.010 7.010 9 N 0.083 4.917 10 C -0.503 4.503 11 H 0.126 0.874 12 C -0.151 4.151 13 N -0.429 5.429 14 Si 0.748 3.252 15 H -0.190 1.190 16 H -0.202 1.202 17 H -0.191 1.191 18 H 0.078 0.922 19 H 0.067 0.933 20 H 0.071 0.929 21 H 0.097 0.903 22 H 0.079 0.921 23 H 0.067 0.933 24 H 0.068 0.932 25 H 0.168 0.832 26 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 0.199 2.993 -1.878 3.539 hybrid contribution 1.132 -1.653 -0.595 2.090 sum 1.331 1.340 -2.474 3.112 Atomic orbital electron populations 1.21697 0.94637 1.01665 1.00993 1.19145 0.95217 0.94220 0.92476 1.21746 1.00668 0.95609 1.01210 1.22580 1.00988 0.94069 0.94397 1.69894 1.24446 1.28402 0.99317 1.21370 1.06044 0.96130 0.98160 1.21355 1.08744 0.95779 0.85884 1.98228 1.70850 1.46713 1.85190 1.41258 1.28263 1.17945 1.04194 1.19599 1.46383 0.89780 0.94501 0.87436 1.25454 0.95506 0.96557 0.97569 1.70031 1.31656 1.08415 1.32843 0.86036 0.80834 0.78185 0.80136 1.18989 1.20241 1.19139 0.92198 0.93257 0.92930 0.90297 0.92065 0.93261 0.93194 0.83196 0.90826 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.35 9.18 37.16 0.34 -2.01 15 2 C 0.01 0.19 3.26 -91.77 -0.30 -0.11 15 3 C -0.13 -2.28 9.18 37.16 0.34 -1.94 15 4 C 0.14 3.36 6.41 -154.23 -0.99 2.37 15 5 N -0.50 -12.46 11.24 -10.47 -0.12 -12.58 15 6 C -0.06 -1.56 11.84 -17.72 -0.21 -1.77 15 7 C 0.03 0.82 6.82 -16.33 -0.11 0.70 15 8 Cl -0.04 -0.90 26.05 -51.86 -1.35 -2.25 15 9 N -0.25 -6.61 2.82 -55.69 -0.16 -6.76 15 10 C -0.37 -9.71 9.26 -14.71 -0.14 -9.85 15 11 H 0.11 2.63 7.52 -52.49 -0.39 2.24 15 12 C 0.07 1.63 4.54 -17.50 -0.08 1.55 15 13 N -0.80 -21.02 10.78 55.49 0.60 -20.42 15 14 Si 0.92 19.11 29.60 -169.99 -5.03 14.08 15 15 H -0.27 -5.48 7.11 56.52 0.40 -5.08 15 16 H -0.28 -5.65 7.11 56.52 0.40 -5.25 15 17 H -0.27 -5.33 7.11 56.52 0.40 -4.93 15 18 H 0.06 1.08 8.14 -51.93 -0.42 0.66 15 19 H 0.05 0.71 8.14 -51.93 -0.42 0.29 15 20 H 0.05 1.00 8.14 -51.93 -0.42 0.58 15 21 H 0.08 1.58 7.14 -51.93 -0.37 1.21 15 22 H 0.06 1.06 8.14 -51.93 -0.42 0.64 15 23 H 0.05 0.85 8.14 -51.93 -0.42 0.43 15 24 H 0.05 0.69 8.14 -51.93 -0.42 0.27 15 25 H 0.15 3.26 8.06 -52.49 -0.42 2.84 15 26 H 0.28 6.89 8.31 -40.82 -0.34 6.56 15 LS Contribution 242.17 15.07 3.65 3.65 Total: -1.00 -28.46 242.17 -6.41 -34.87 By element: Atomic # 1 Polarization: 3.32 SS G_CDS: -2.86 Total: 0.46 kcal Atomic # 6 Polarization: -9.90 SS G_CDS: -1.14 Total: -11.04 kcal Atomic # 7 Polarization: -40.09 SS G_CDS: 0.32 Total: -39.77 kcal Atomic # 14 Polarization: 19.11 SS G_CDS: -5.03 Total: 14.08 kcal Atomic # 17 Polarization: -0.90 SS G_CDS: -1.35 Total: -2.25 kcal Total LS contribution 3.65 Total: 3.65 kcal Total: -28.46 -6.41 -34.87 kcal The number of atoms in the molecule is 26 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259995360.mol2 26 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.877 kcal (2) G-P(sol) polarization free energy of solvation -28.459 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.418 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.412 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.872 kcal (6) G-S(sol) free energy of system = (1) + (5) 32.005 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds