Wall clock time and date at job start Mon Mar 30 2020 20:35:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52992 * 109.47219 * 2 1 4 4 N 1.46500 * 109.47179 * 180.02562 * 3 2 1 5 5 N 1.39875 * 125.67484 * 90.02524 * 4 3 2 6 6 C 1.30295 * 109.28763 * 179.97438 * 5 4 3 7 7 C 1.41883 * 108.08396 * 359.97438 * 6 5 4 8 8 C 1.41511 * 126.57782 * 179.97438 * 7 6 5 9 9 H 1.07999 * 119.99881 * 180.02562 * 8 7 6 10 10 C 1.39671 * 120.00093 * 0.05371 * 8 7 6 11 11 N 1.31067 * 119.99838 * 0.02562 * 10 8 7 12 12 Si 1.86800 * 120.00248 * 179.97438 * 10 8 7 13 13 H 1.48504 * 109.46783 * 60.00465 * 12 10 8 14 14 H 1.48495 * 109.46992 * 180.02562 * 12 10 8 15 15 H 1.48499 * 109.46947 * 300.00390 * 12 10 8 16 16 C 1.34588 * 125.67787 * 269.99853 * 4 3 2 17 17 Cl 1.73599 * 126.43459 * 0.02562 * 16 4 3 18 18 H 1.09006 * 109.47510 * 180.02562 * 1 2 3 19 19 H 1.08999 * 109.47072 * 299.99700 * 1 2 3 20 20 H 1.09001 * 109.47566 * 60.00055 * 1 2 3 21 21 H 1.09006 * 109.46499 * 239.99975 * 2 1 3 22 22 H 1.08998 * 109.47170 * 120.00595 * 2 1 3 23 23 H 1.09004 * 109.47292 * 60.00000 * 3 2 1 24 24 H 1.09005 * 109.47241 * 300.00571 * 3 2 1 25 25 H 1.08010 * 125.96102 * 180.02562 * 6 5 4 26 26 H 0.96998 * 119.99552 * 179.97438 * 11 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 7 3.5050 1.4424 -0.0006 5 7 4.3202 1.4431 -1.1372 6 6 5.5704 1.4434 -0.7702 7 6 5.6130 1.4435 0.6480 8 6 6.7742 1.4434 1.4568 9 1 6.6828 1.4431 2.5329 10 6 8.0386 1.4442 0.8634 11 7 8.1496 1.4456 -0.4426 12 14 9.5715 1.4447 1.9310 13 1 9.5782 0.2319 2.7879 14 1 10.7778 1.4462 1.0650 15 1 9.5769 2.6569 2.7887 16 6 4.2904 1.4423 1.0923 17 17 3.7579 1.4414 2.7446 18 1 -0.3634 -1.0277 0.0005 19 1 -0.3633 0.5138 0.8900 20 1 -0.3634 0.5138 -0.8900 21 1 1.8932 -0.5139 -0.8901 22 1 1.8933 -0.5139 0.8899 23 1 1.6767 1.9563 0.8900 24 1 1.6766 1.9563 -0.8900 25 1 6.4253 1.4443 -1.4303 26 1 9.0277 1.4465 -0.8546 RHF calculation, no. of doubly occupied orbitals= 36 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260364951.mol2 26 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 20:35:56 Heat of formation + Delta-G solvation = 47.922604 kcal Electronic energy + Delta-G solvation = -12083.133435 eV Core-core repulsion = 9802.796992 eV Total energy + Delta-G solvation = -2280.336443 eV No. of doubly occupied orbitals = 36 Molecular weight (most abundant/longest-lived isotopes) = 214.057 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -39.33923 -35.39326 -34.87788 -33.32975 -30.29000 -28.93173 -26.01653 -24.22349 -21.46383 -19.77061 -19.23404 -17.25633 -15.48120 -14.89473 -14.61881 -14.07276 -13.42054 -12.93317 -12.62875 -12.16238 -11.76047 -11.57711 -11.21865 -11.08777 -11.05030 -10.76237 -10.66058 -10.43227 -10.33139 -9.83646 -9.29663 -8.93275 -7.79761 -7.25520 -6.54052 -4.08112 2.95493 3.05419 3.17290 3.21571 3.28896 4.06899 4.10371 4.27095 5.15842 5.23144 5.46903 5.48854 5.60573 5.84171 5.95809 6.10841 6.27435 6.51620 6.71271 7.14645 7.22092 7.51644 7.99081 8.30102 8.55602 8.84800 9.05916 9.31213 10.44930 Molecular weight = 214.06amu Principal moments of inertia in cm(-1) A = 0.047512 B = 0.009174 C = 0.007986 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 589.181555 B = 3051.271082 C = 3505.397583 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.141 4.141 3 C 0.148 3.852 4 N -0.389 5.389 5 N -0.314 5.314 6 C 0.033 3.967 7 C 0.010 3.990 8 C -0.427 4.427 9 H 0.075 0.925 10 C 0.068 3.932 11 N -0.836 5.836 12 Si 0.919 3.081 13 H -0.268 1.268 14 H -0.281 1.281 15 H -0.268 1.268 16 C -0.049 4.049 17 Cl -0.065 7.065 18 H 0.054 0.946 19 H 0.053 0.947 20 H 0.054 0.946 21 H 0.067 0.933 22 H 0.065 0.935 23 H 0.074 0.926 24 H 0.077 0.923 25 H 0.209 0.791 26 H 0.277 0.723 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.236 -0.947 1.707 7.495 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.179 4.179 3 C 0.025 3.975 4 N -0.180 5.180 5 N -0.137 5.137 6 C -0.154 4.154 7 C 0.000 4.000 8 C -0.461 4.461 9 H 0.094 0.906 10 C -0.143 4.143 11 N -0.467 5.467 12 Si 0.745 3.255 13 H -0.193 1.193 14 H -0.206 1.206 15 H -0.193 1.193 16 C -0.195 4.195 17 Cl -0.038 7.038 18 H 0.073 0.927 19 H 0.073 0.927 20 H 0.073 0.927 21 H 0.086 0.914 22 H 0.084 0.916 23 H 0.093 0.907 24 H 0.096 0.904 25 H 0.225 0.775 26 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -7.995 -0.934 0.759 8.085 hybrid contribution 1.128 -0.030 1.395 1.794 sum -6.867 -0.965 2.154 7.261 Atomic orbital electron populations 1.21691 0.95448 1.01624 1.01645 1.21951 0.95429 0.97523 1.03042 1.21237 0.77138 0.96769 1.02376 1.47441 1.04079 1.64051 1.02470 1.76686 1.03726 1.25991 1.07298 1.25012 0.93196 1.00955 0.96251 1.17807 0.89288 1.00640 0.92305 1.18774 0.88814 1.44539 0.93995 0.90646 1.25694 1.00543 0.92962 0.95144 1.69441 1.25574 1.41557 1.10098 0.86191 0.79783 0.79557 0.80016 1.19323 1.20602 1.19329 1.21219 0.90810 1.28100 0.79380 1.98205 1.90797 1.98064 1.16748 0.92655 0.92746 0.92696 0.91443 0.91605 0.90719 0.90424 0.77528 0.91207 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.71 9.91 37.16 0.37 -1.34 15 2 C -0.14 -2.20 6.26 -26.73 -0.17 -2.37 15 3 C 0.15 2.63 6.25 -4.05 -0.03 2.61 15 4 N -0.39 -8.99 3.58 -57.18 -0.20 -9.20 15 5 N -0.31 -7.92 12.46 30.97 0.39 -7.53 15 6 C 0.03 0.89 10.91 -16.81 -0.18 0.71 15 7 C 0.01 0.28 5.94 -106.78 -0.63 -0.35 15 8 C -0.43 -11.57 9.25 -37.80 -0.35 -11.92 15 9 H 0.08 1.99 7.78 -52.49 -0.41 1.59 15 10 C 0.07 1.74 5.49 -17.34 -0.10 1.65 15 11 N -0.84 -21.52 10.33 55.53 0.57 -20.94 15 12 Si 0.92 19.41 29.56 -169.99 -5.02 14.39 15 13 H -0.27 -5.63 7.11 56.52 0.40 -5.23 15 14 H -0.28 -5.77 7.11 56.52 0.40 -5.37 15 15 H -0.27 -5.63 7.11 56.52 0.40 -5.23 15 16 C -0.05 -1.22 7.59 -15.86 -0.12 -1.34 15 17 Cl -0.07 -1.38 28.53 -51.86 -1.48 -2.86 15 18 H 0.05 0.59 8.14 -51.93 -0.42 0.16 15 19 H 0.05 0.59 8.14 -51.93 -0.42 0.17 15 20 H 0.05 0.59 8.14 -51.93 -0.42 0.17 15 21 H 0.07 1.13 8.14 -51.93 -0.42 0.71 15 22 H 0.07 1.11 8.14 -51.93 -0.42 0.69 15 23 H 0.07 1.24 7.78 -51.93 -0.40 0.83 15 24 H 0.08 1.28 8.14 -51.93 -0.42 0.86 15 25 H 0.21 5.54 5.77 -52.48 -0.30 5.24 15 26 H 0.28 6.56 8.30 -40.82 -0.34 6.22 15 LS Contribution 245.86 15.07 3.71 3.71 Total: -1.00 -27.97 245.86 -6.04 -34.00 By element: Atomic # 1 Polarization: 3.58 SS G_CDS: -2.79 Total: 0.80 kcal Atomic # 6 Polarization: -11.15 SS G_CDS: -1.21 Total: -12.36 kcal Atomic # 7 Polarization: -38.43 SS G_CDS: 0.75 Total: -37.67 kcal Atomic # 14 Polarization: 19.41 SS G_CDS: -5.02 Total: 14.39 kcal Atomic # 17 Polarization: -1.38 SS G_CDS: -1.48 Total: -2.86 kcal Total LS contribution 3.71 Total: 3.71 kcal Total: -27.97 -6.04 -34.00 kcal The number of atoms in the molecule is 26 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260364951.mol2 26 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.926 kcal (2) G-P(sol) polarization free energy of solvation -27.966 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.960 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.038 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.003 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.923 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds