Wall clock time and date at job start Mon Mar 30 2020 20:37:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52999 * 109.47182 * 2 1 4 4 O 1.42967 * 109.46882 * 119.99591 * 2 1 3 5 5 C 1.43095 * 113.77014 * 61.20565 * 4 2 1 6 6 C 1.53266 * 108.94092 * 57.97057 * 5 4 2 7 7 O 1.42892 * 109.57007 * 185.66660 * 6 5 4 8 8 C 1.42901 * 113.99805 * 209.99626 * 7 6 5 9 9 C 1.50696 * 109.47566 * 179.97438 * 8 7 6 10 10 H 1.08004 * 120.00049 * 0.02562 * 9 8 7 11 11 C 1.37880 * 120.00491 * 179.97438 * 9 8 7 12 12 N 1.31515 * 119.99629 * 0.02562 * 11 9 8 13 13 Si 1.86797 * 120.00044 * 180.02562 * 11 9 8 14 14 H 1.48500 * 109.47208 * 0.02562 * 13 11 9 15 15 H 1.48509 * 109.46890 * 120.00420 * 13 11 9 16 16 H 1.48493 * 109.47256 * 240.00035 * 13 11 9 17 17 C 1.53256 * 108.84277 * 305.47453 * 6 5 4 18 18 O 1.42958 * 109.47390 * 239.99497 * 2 1 3 19 19 H 1.08998 * 109.47729 * 300.00216 * 1 2 3 20 20 H 1.09002 * 109.47504 * 60.00628 * 1 2 3 21 21 H 1.09003 * 109.47441 * 180.02562 * 1 2 3 22 22 H 1.08995 * 109.47553 * 179.97438 * 3 2 1 23 23 H 1.09007 * 109.46866 * 300.00069 * 3 2 1 24 24 H 1.09001 * 109.47462 * 59.99266 * 3 2 1 25 25 H 1.08999 * 109.55643 * 177.80695 * 5 4 2 26 26 H 1.08999 * 109.55852 * 298.02362 * 5 4 2 27 27 H 1.09005 * 109.57087 * 65.41198 * 6 5 4 28 28 H 1.08998 * 109.47586 * 300.00621 * 8 7 6 29 29 H 1.09007 * 109.46707 * 60.00281 * 8 7 6 30 30 H 0.97000 * 119.99579 * 179.97438 * 12 11 9 31 31 H 1.09001 * 109.55755 * 174.36031 * 17 6 5 32 32 H 1.08996 * 109.55968 * 294.68708 * 17 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 8 2.0065 -0.6739 1.1674 5 6 1.6040 -2.0448 1.2467 6 6 2.1043 -2.7830 0.0002 7 8 1.5988 -4.1195 0.0003 8 6 2.4540 -5.0645 -0.6460 9 6 1.8263 -6.4332 -0.5865 10 1 0.8696 -6.5680 -0.1037 11 6 2.4726 -7.5133 -1.1492 12 7 3.6373 -7.3490 -1.7376 13 14 1.6941 -9.2097 -1.0760 14 1 0.3927 -9.1268 -0.3655 15 1 1.4733 -9.7130 -2.4556 16 1 2.5971 -10.1378 -0.3491 17 6 1.6041 -2.0449 -1.2463 18 8 2.0066 -0.6740 -1.1672 19 1 -0.3634 0.5138 0.8899 20 1 -0.3634 0.5137 -0.8900 21 1 -0.3634 -1.0277 0.0005 22 1 3.1299 1.4426 0.0005 23 1 1.6766 1.9563 -0.8900 24 1 1.6766 1.9564 0.8899 25 1 2.0348 -2.5005 2.1382 26 1 0.5167 -2.1036 1.2958 27 1 3.1941 -2.8047 0.0015 28 1 2.5952 -4.7741 -1.6871 29 1 3.4195 -5.0857 -0.1406 30 1 4.0922 -8.1090 -2.1331 31 1 2.0350 -2.5008 -2.1378 32 1 0.5168 -2.1039 -1.2936 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000199974421.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 20:37:40 Heat of formation + Delta-G solvation = -147.463562 kcal Electronic energy + Delta-G solvation = -15164.792952 eV Core-core repulsion = 12511.503629 eV Total energy + Delta-G solvation = -2653.289323 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 216.119 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -40.21504 -36.85580 -35.52656 -33.05134 -32.33250 -29.68047 -27.57651 -26.82346 -25.77994 -22.66568 -22.03957 -19.65163 -17.53064 -16.66889 -16.28093 -15.92306 -15.24827 -15.01609 -14.56324 -13.83283 -13.35583 -13.02419 -12.83472 -12.64972 -12.50891 -12.23878 -12.21664 -11.77635 -11.37890 -11.04269 -10.85614 -10.79701 -10.70753 -10.23829 -9.97336 -9.30821 -9.19268 -8.84736 -8.24476 -6.17330 -4.20077 3.25560 3.32177 3.38069 3.67774 3.75596 4.28776 4.65840 4.72479 4.88260 5.08465 5.19481 5.25403 5.41244 5.42741 5.55566 5.60899 5.67441 5.70376 5.87130 6.02466 6.14487 6.21798 6.26921 6.89520 7.06283 7.31722 7.34718 7.71998 8.05096 8.42076 8.91872 9.45057 10.94085 Molecular weight = 216.12amu Principal moments of inertia in cm(-1) A = 0.071463 B = 0.006049 C = 0.005946 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 391.716225 B = 4628.004506 C = 4707.732115 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C 0.261 3.739 3 C -0.126 4.126 4 O -0.385 6.385 5 C 0.060 3.940 6 C 0.027 3.973 7 O -0.381 6.381 8 C 0.194 3.806 9 C -0.518 4.518 10 H 0.068 0.932 11 C 0.057 3.943 12 N -0.897 5.897 13 Si 0.909 3.091 14 H -0.270 1.270 15 H -0.282 1.282 16 H -0.282 1.282 17 C 0.036 3.964 18 O -0.386 6.386 19 H 0.074 0.926 20 H 0.074 0.926 21 H 0.069 0.931 22 H 0.071 0.929 23 H 0.077 0.923 24 H 0.076 0.924 25 H 0.103 0.897 26 H 0.062 0.938 27 H 0.070 0.930 28 H 0.008 0.992 29 H 0.009 0.991 30 H 0.265 0.735 31 H 0.101 0.899 32 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.492 13.868 2.949 14.872 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.265 4.265 2 C 0.184 3.816 3 C -0.183 4.183 4 O -0.306 6.306 5 C -0.016 4.016 6 C -0.033 4.033 7 O -0.301 6.301 8 C 0.120 3.880 9 C -0.556 4.556 10 H 0.086 0.914 11 C -0.144 4.144 12 N -0.535 5.535 13 Si 0.736 3.264 14 H -0.195 1.195 15 H -0.208 1.208 16 H -0.208 1.208 17 C -0.041 4.041 18 O -0.307 6.307 19 H 0.093 0.907 20 H 0.093 0.907 21 H 0.088 0.912 22 H 0.090 0.910 23 H 0.096 0.904 24 H 0.095 0.905 25 H 0.121 0.879 26 H 0.080 0.920 27 H 0.088 0.912 28 H 0.026 0.974 29 H 0.027 0.973 30 H 0.074 0.926 31 H 0.120 0.880 32 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -4.306 13.895 2.934 14.840 hybrid contribution -0.311 -1.271 -0.248 1.332 sum -4.618 12.624 2.687 13.708 Atomic orbital electron populations 1.22844 0.96281 1.03823 1.03514 1.22736 0.91237 0.91094 0.76502 1.21581 1.02922 0.90898 1.02906 1.88115 1.76367 1.23388 1.42729 1.22674 0.99954 0.80436 0.98573 1.22982 0.99188 0.86374 0.94750 1.87876 1.48402 1.14316 1.79460 1.20347 0.89519 0.86650 0.91514 1.21066 1.06413 0.91066 1.37086 0.91403 1.24958 0.94927 0.99613 0.94937 1.69973 1.14752 1.31526 1.37285 0.86261 0.79356 0.82906 0.77862 1.19453 1.20775 1.20759 1.23265 1.00048 0.80640 1.00129 1.88106 1.76178 1.23842 1.42576 0.90717 0.90685 0.91170 0.90964 0.90437 0.90470 0.87857 0.91951 0.91214 0.97443 0.97342 0.92573 0.88047 0.92011 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -2.49 8.11 37.16 0.30 -2.19 16 2 C 0.26 3.73 1.50 -26.73 -0.04 3.69 16 3 C -0.13 -1.39 9.21 37.16 0.34 -1.05 16 4 O -0.38 -6.19 10.35 -59.04 -0.61 -6.80 16 5 C 0.06 1.00 6.25 37.29 0.23 1.23 16 6 C 0.03 0.53 3.02 -26.46 -0.08 0.45 16 7 O -0.38 -9.01 9.98 -35.23 -0.35 -9.36 16 8 C 0.19 5.25 5.51 36.00 0.20 5.44 16 9 C -0.52 -15.05 9.43 -34.44 -0.32 -15.38 16 10 H 0.07 1.95 7.81 -52.48 -0.41 1.54 16 11 C 0.06 1.64 5.46 -17.82 -0.10 1.54 16 12 N -0.90 -26.63 13.29 55.43 0.74 -25.89 16 13 Si 0.91 21.59 29.54 -169.99 -5.02 16.57 16 14 H -0.27 -6.29 7.11 56.52 0.40 -5.89 16 15 H -0.28 -6.57 7.11 56.52 0.40 -6.16 16 16 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 17 C 0.04 0.63 6.23 37.29 0.23 0.86 16 18 O -0.39 -6.48 10.35 -59.04 -0.61 -7.09 16 19 H 0.07 0.77 8.14 -51.93 -0.42 0.35 16 20 H 0.07 0.80 8.14 -51.93 -0.42 0.37 16 21 H 0.07 0.92 5.12 -51.93 -0.27 0.65 16 22 H 0.07 0.83 8.14 -51.93 -0.42 0.40 16 23 H 0.08 0.73 8.14 -51.93 -0.42 0.31 16 24 H 0.08 0.71 8.14 -51.93 -0.42 0.29 16 25 H 0.10 1.64 8.14 -51.93 -0.42 1.21 16 26 H 0.06 0.97 6.53 -51.93 -0.34 0.63 16 27 H 0.07 1.42 7.79 -51.93 -0.40 1.02 16 28 H 0.01 0.21 8.08 -51.93 -0.42 -0.21 16 29 H 0.01 0.25 8.09 -51.93 -0.42 -0.17 16 30 H 0.26 7.33 8.31 -40.82 -0.34 6.99 16 31 H 0.10 1.85 8.08 -51.93 -0.42 1.43 16 32 H 0.06 1.04 6.53 -51.93 -0.34 0.70 16 LS Contribution 264.74 15.07 3.99 3.99 Total: -1.00 -30.90 264.74 -5.79 -36.69 By element: Atomic # 1 Polarization: 1.99 SS G_CDS: -4.69 Total: -2.70 kcal Atomic # 6 Polarization: -6.17 SS G_CDS: 0.77 Total: -5.40 kcal Atomic # 7 Polarization: -26.63 SS G_CDS: 0.74 Total: -25.89 kcal Atomic # 8 Polarization: -21.68 SS G_CDS: -1.57 Total: -23.25 kcal Atomic # 14 Polarization: 21.59 SS G_CDS: -5.02 Total: 16.57 kcal Total LS contribution 3.99 Total: 3.99 kcal Total: -30.90 -5.79 -36.69 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000199974421.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.775 kcal (2) G-P(sol) polarization free energy of solvation -30.895 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.671 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.793 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.688 kcal (6) G-S(sol) free energy of system = (1) + (5) -147.464 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds