Wall clock time and date at job start Mon Mar 30 2020 20:44:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.30278 * 126.28140 * 2 1 4 4 N 1.28666 * 109.37862 * 179.97438 * 3 2 1 5 5 C 1.30272 * 109.38253 * 0.02562 * 4 3 2 6 6 C 1.50703 * 126.28280 * 180.02562 * 5 4 3 7 7 N 1.46890 * 109.47225 * 90.02116 * 6 5 4 8 8 C 1.46906 * 110.99873 * 179.97438 * 7 6 5 9 9 H 1.08990 * 109.47507 * 325.00627 * 8 7 6 10 10 C 1.53001 * 109.46813 * 85.00329 * 8 7 6 11 11 C 1.53002 * 109.47295 * 204.99849 * 8 7 6 12 12 C 1.50699 * 109.46630 * 65.00494 * 11 8 7 13 13 H 1.08005 * 120.00248 * 359.97438 * 12 11 8 14 14 C 1.37881 * 119.99816 * 180.02562 * 12 11 8 15 15 N 1.31511 * 119.99819 * 359.97438 * 14 12 11 16 16 Si 1.86803 * 119.99741 * 179.97438 * 14 12 11 17 17 H 1.48503 * 109.47058 * 90.00018 * 16 14 12 18 18 H 1.48502 * 109.46716 * 209.99396 * 16 14 12 19 19 H 1.48499 * 109.47380 * 329.99715 * 16 14 12 20 20 O 1.34355 * 126.28342 * 179.68745 * 2 1 3 21 21 H 1.09002 * 109.47152 * 90.02383 * 1 2 3 22 22 H 1.09001 * 109.46980 * 330.02484 * 1 2 3 23 23 H 1.09004 * 109.47113 * 210.02464 * 1 2 3 24 24 H 1.09004 * 109.47060 * 210.02702 * 6 5 4 25 25 H 1.09004 * 109.46417 * 330.02012 * 6 5 4 26 26 H 1.00903 * 111.00395 * 56.05287 * 7 6 5 27 27 H 1.08996 * 109.47399 * 179.97438 * 10 8 7 28 28 H 1.09000 * 109.47297 * 300.00361 * 10 8 7 29 29 H 1.09006 * 109.47284 * 59.99841 * 10 8 7 30 30 H 1.08993 * 109.47020 * 184.99937 * 11 8 7 31 31 H 1.08997 * 109.47092 * 305.00745 * 11 8 7 32 32 H 0.97001 * 119.99775 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2779 1.0502 0.0000 4 7 3.5090 0.6761 0.0005 5 6 3.5654 -0.6254 0.0004 6 6 4.8177 -1.4638 0.0014 7 7 5.2230 -1.7369 1.3866 8 6 6.4429 -2.5544 1.4267 9 1 6.4361 -3.2584 0.5947 10 6 7.6692 -1.6462 1.3163 11 6 6.4967 -3.3258 2.7470 12 6 5.3560 -4.3090 2.8011 13 1 4.6618 -4.3767 1.9765 14 6 5.1979 -5.1216 3.9038 15 7 6.0430 -5.0388 4.9081 16 14 3.7835 -6.3399 3.9711 17 1 4.2176 -7.6350 3.3885 18 1 3.3739 -6.5451 5.3837 19 1 2.6347 -5.8081 3.1949 20 8 2.3021 -1.0830 0.0059 21 1 -0.3633 -0.0004 -1.0277 22 1 -0.3633 0.8902 0.5135 23 1 -0.3633 -0.8898 0.5142 24 1 4.6250 -2.4052 -0.5132 25 1 5.6152 -0.9260 -0.5113 26 1 4.4757 -2.1777 1.9019 27 1 8.5744 -2.2527 1.3466 28 1 7.6309 -1.0966 0.3758 29 1 7.6761 -0.9422 2.1485 30 1 7.4427 -3.8627 2.8157 31 1 6.4140 -2.6272 3.5795 32 1 5.9320 -5.6107 5.6837 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000719006549.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 20:44:58 Heat of formation + Delta-G solvation = 24.557982 kcal Electronic energy + Delta-G solvation = -15217.832210 eV Core-core repulsion = 12601.099052 eV Total energy + Delta-G solvation = -2616.733158 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 225.122 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -44.07340 -36.95984 -36.01757 -33.55438 -32.57078 -30.97035 -28.18547 -27.47298 -25.36016 -23.12212 -22.55654 -21.88626 -19.63385 -17.29914 -16.95323 -16.43267 -15.69675 -14.85755 -14.71702 -14.42980 -14.16926 -13.37510 -13.04158 -12.77364 -12.44786 -12.24467 -11.89934 -11.75216 -11.65814 -11.31205 -11.22324 -10.87762 -10.71581 -10.62175 -10.33694 -9.50584 -9.29117 -9.15057 -8.46783 -7.95128 -6.09656 -4.13809 1.24652 2.35734 2.50469 3.24520 3.31759 3.33313 3.89429 4.36810 4.45784 4.77584 4.90980 5.08736 5.26096 5.28516 5.37732 5.48811 5.63568 5.74981 5.79560 5.88785 6.07933 6.19589 6.40979 6.80829 6.85712 7.29787 7.53644 7.82136 7.89064 7.99044 8.26829 8.44155 8.91966 9.50939 11.01048 Molecular weight = 225.12amu Principal moments of inertia in cm(-1) A = 0.023579 B = 0.007393 C = 0.005884 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1187.230369 B = 3786.458632 C = 4757.167947 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 C 0.151 3.849 3 N -0.293 5.293 4 N -0.277 5.277 5 C 0.181 3.819 6 C 0.153 3.847 7 N -0.675 5.675 8 C 0.089 3.911 9 H 0.036 0.964 10 C -0.138 4.138 11 C 0.020 3.980 12 C -0.529 4.529 13 H 0.051 0.949 14 C 0.062 3.938 15 N -0.888 5.888 16 Si 0.890 3.110 17 H -0.280 1.280 18 H -0.285 1.285 19 H -0.275 1.275 20 O -0.225 6.225 21 H 0.095 0.905 22 H 0.104 0.896 23 H 0.092 0.908 24 H 0.060 0.940 25 H 0.113 0.887 26 H 0.360 0.640 27 H 0.052 0.948 28 H 0.039 0.961 29 H 0.058 0.942 30 H 0.026 0.974 31 H 0.028 0.972 32 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.579 6.152 -10.078 14.030 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.060 4.060 3 N -0.141 5.141 4 N -0.124 5.124 5 C -0.031 4.031 6 C 0.022 3.978 7 N -0.312 5.312 8 C -0.019 4.019 9 H 0.054 0.946 10 C -0.196 4.196 11 C -0.018 4.018 12 C -0.568 4.568 13 H 0.069 0.931 14 C -0.140 4.140 15 N -0.527 5.527 16 Si 0.718 3.282 17 H -0.206 1.206 18 H -0.211 1.211 19 H -0.200 1.200 20 O -0.104 6.104 21 H 0.114 0.886 22 H 0.123 0.877 23 H 0.111 0.889 24 H 0.078 0.922 25 H 0.131 0.869 26 H 0.181 0.819 27 H 0.071 0.929 28 H 0.058 0.942 29 H 0.077 0.923 30 H 0.045 0.955 31 H 0.046 0.954 32 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -6.825 7.893 -9.819 14.328 hybrid contribution -1.513 -2.811 -0.077 3.193 sum -8.339 5.083 -9.896 13.903 Atomic orbital electron populations 1.20305 0.80504 1.05653 1.04891 1.27945 0.97812 0.79915 1.00334 1.74368 0.96343 1.25777 1.17577 1.74373 1.11681 1.09360 1.16976 1.28140 0.84887 0.91669 0.98359 1.20460 0.86780 0.95918 0.94662 1.60659 1.09157 1.52808 1.08559 1.21702 0.87486 0.91899 1.00817 0.94576 1.21823 0.97305 0.99638 1.00824 1.19298 0.97470 0.94337 0.90646 1.21152 1.12235 1.20439 1.02927 0.93057 1.24985 0.96189 0.97209 0.95624 1.69954 1.36402 1.39202 1.07122 0.86633 0.82642 0.81636 0.77322 1.20637 1.21117 1.19961 1.84803 1.17840 1.38313 1.69447 0.88610 0.87716 0.88916 0.92240 0.86950 0.81885 0.92888 0.94191 0.92332 0.95537 0.95369 0.92828 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.44 10.51 36.01 0.38 -0.07 16 2 C 0.15 2.12 8.48 -12.94 -0.11 2.01 16 3 N -0.29 -4.92 12.22 32.55 0.40 -4.52 16 4 N -0.28 -5.02 12.22 32.55 0.40 -4.62 16 5 C 0.18 3.04 7.99 -12.94 -0.10 2.93 16 6 C 0.15 2.39 6.11 -4.98 -0.03 2.36 16 7 N -0.68 -12.79 6.30 -107.99 -0.68 -13.47 16 8 C 0.09 1.76 2.59 -67.71 -0.18 1.59 16 9 H 0.04 0.70 7.80 -51.93 -0.40 0.29 16 10 C -0.14 -2.36 9.41 37.16 0.35 -2.01 16 11 C 0.02 0.49 4.57 -27.88 -0.13 0.36 16 12 C -0.53 -14.13 8.12 -34.44 -0.28 -14.41 16 13 H 0.05 1.32 7.49 -52.48 -0.39 0.93 16 14 C 0.06 1.72 5.46 -17.82 -0.10 1.63 16 15 N -0.89 -25.96 13.29 55.43 0.74 -25.23 16 16 Si 0.89 21.02 29.54 -169.99 -5.02 16.00 16 17 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 18 H -0.29 -6.73 7.11 56.52 0.40 -6.33 16 19 H -0.27 -6.35 7.11 56.52 0.40 -5.95 16 20 O -0.23 -3.59 10.87 5.41 0.06 -3.53 16 21 H 0.10 0.56 8.14 -51.93 -0.42 0.14 16 22 H 0.10 0.69 8.14 -51.93 -0.42 0.27 16 23 H 0.09 0.63 8.14 -51.93 -0.42 0.21 16 24 H 0.06 0.86 8.05 -51.93 -0.42 0.44 16 25 H 0.11 1.58 7.44 -51.93 -0.39 1.20 16 26 H 0.36 7.50 7.20 -39.29 -0.28 7.22 16 27 H 0.05 0.86 8.14 -51.93 -0.42 0.43 16 28 H 0.04 0.59 7.45 -51.93 -0.39 0.21 16 29 H 0.06 1.04 8.14 -51.93 -0.42 0.62 16 30 H 0.03 0.69 8.14 -51.93 -0.42 0.27 16 31 H 0.03 0.76 8.14 -51.93 -0.42 0.33 16 32 H 0.26 7.25 8.31 -40.82 -0.34 6.91 16 LS Contribution 279.74 15.07 4.22 4.22 Total: -1.00 -31.27 279.74 -4.46 -35.73 By element: Atomic # 1 Polarization: 5.40 SS G_CDS: -4.37 Total: 1.04 kcal Atomic # 6 Polarization: -5.42 SS G_CDS: -0.20 Total: -5.62 kcal Atomic # 7 Polarization: -48.69 SS G_CDS: 0.85 Total: -47.84 kcal Atomic # 8 Polarization: -3.59 SS G_CDS: 0.06 Total: -3.53 kcal Atomic # 14 Polarization: 21.02 SS G_CDS: -5.02 Total: 16.00 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -31.27 -4.46 -35.73 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000719006549.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.288 kcal (2) G-P(sol) polarization free energy of solvation -31.274 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.014 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.456 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.730 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.558 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds