Wall clock time and date at job start Mon Mar 30 2020 20:49:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35970 * 117.00107 * 2 1 4 4 C 1.37725 * 120.02612 * 359.73214 * 3 2 1 5 5 C 1.40851 * 119.69290 * 179.73085 * 4 3 2 6 6 C 1.41110 * 120.12996 * 180.29466 * 5 4 3 7 7 H 1.07995 * 119.99960 * 24.94517 * 6 5 4 8 8 C 1.39841 * 120.00225 * 204.94239 * 6 5 4 9 9 N 1.30921 * 119.99657 * 18.00905 * 8 6 5 10 10 Si 1.86799 * 120.00189 * 198.00973 * 8 6 5 11 11 H 1.48490 * 109.47135 * 359.97438 * 10 8 6 12 12 H 1.48501 * 109.47201 * 120.00093 * 10 8 6 13 13 H 1.48501 * 109.46895 * 239.99620 * 10 8 6 14 14 C 1.40898 * 119.74038 * 0.53661 * 5 4 3 15 15 C 1.36447 * 120.04177 * 359.73618 * 14 5 4 16 16 Cl 1.73598 * 119.84347 * 180.02562 * 15 14 5 17 17 C 1.39519 * 120.31305 * 359.97438 * 15 14 5 18 18 N 1.39049 * 119.87107 * 179.97438 * 17 15 14 19 19 H 1.08996 * 109.47124 * 59.99651 * 1 2 3 20 20 H 1.08999 * 109.46652 * 299.99764 * 1 2 3 21 21 H 1.08999 * 109.46723 * 180.02562 * 1 2 3 22 22 H 1.07998 * 120.14929 * 359.97327 * 4 3 2 23 23 H 0.96999 * 120.00262 * 180.02562 * 9 8 6 24 24 H 1.08000 * 119.98163 * 179.75300 * 14 5 4 25 25 H 0.97008 * 120.00456 * 180.02562 * 18 17 15 26 26 H 0.97001 * 120.00336 * 0.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2115 0.0000 4 6 1.2968 2.3669 -0.0056 5 6 1.9435 3.6181 0.0002 6 6 1.1846 4.8078 0.0009 7 1 0.1778 4.8058 0.3917 8 6 1.7360 5.9893 -0.5046 9 7 2.7858 5.9400 -1.2853 10 14 0.9748 7.6378 -0.0659 11 1 -0.1942 7.4220 0.8240 12 1 1.9810 8.4775 0.6325 13 1 0.5322 8.3243 -1.3061 14 6 3.3512 3.6773 0.0002 15 6 4.0834 2.5259 0.0000 16 17 5.8175 2.6048 0.0007 17 6 3.4448 1.2854 0.0004 18 7 4.1999 0.1178 -0.0003 19 1 -0.3633 0.5139 -0.8899 20 1 -0.3632 0.5138 0.8900 21 1 -0.3633 -1.0277 0.0005 22 1 0.2181 2.3137 -0.0104 23 1 3.1686 6.7595 -1.6356 24 1 3.8512 4.6347 0.0006 25 1 3.7579 -0.7457 -0.0004 26 1 5.1687 0.1667 -0.0007 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000575715607.mol2 26 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 20:49:11 Heat of formation + Delta-G solvation = -31.494237 kcal Electronic energy + Delta-G solvation = -13433.320093 eV Core-core repulsion = 10923.595075 eV Total energy + Delta-G solvation = -2509.725018 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 227.045 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -38.96732 -36.67508 -35.30694 -34.19358 -32.35552 -28.85853 -28.32746 -26.71808 -24.35187 -21.04410 -20.72167 -17.91309 -16.41560 -15.86228 -15.50969 -15.03710 -14.90650 -14.08339 -13.74704 -12.97179 -12.63068 -12.47778 -11.89845 -11.47752 -11.19890 -10.99457 -10.84885 -10.63782 -10.27374 -10.06916 -9.96753 -9.62711 -9.52296 -8.75352 -7.23647 -6.75540 -6.39231 -4.21967 2.66004 2.84994 3.09263 3.13898 3.19176 3.20986 3.94608 4.26247 4.55830 5.03482 5.54403 5.66219 5.74128 5.92378 6.31459 6.66221 6.71347 6.94450 7.16249 7.24265 7.56411 7.74073 8.03076 8.19919 8.44588 8.62925 8.81472 8.86776 8.93012 10.20589 Molecular weight = 227.05amu Principal moments of inertia in cm(-1) A = 0.024262 B = 0.010727 C = 0.007613 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1153.775281 B = 2609.577556 C = 3676.973218 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.040 3.960 2 O -0.333 6.333 3 C 0.082 3.918 4 C -0.264 4.264 5 C 0.110 3.890 6 C -0.461 4.461 7 H 0.078 0.922 8 C 0.075 3.925 9 N -0.794 5.794 10 Si 0.907 3.093 11 H -0.261 1.261 12 H -0.272 1.272 13 H -0.275 1.275 14 C -0.141 4.141 15 C -0.042 4.042 16 Cl -0.115 7.115 17 C 0.083 3.917 18 N -0.888 5.888 19 H 0.048 0.952 20 H 0.047 0.953 21 H 0.083 0.917 22 H 0.106 0.894 23 H 0.280 0.720 24 H 0.133 0.867 25 H 0.389 0.611 26 H 0.385 0.615 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.543 -4.892 1.669 5.197 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 O -0.248 6.248 3 C 0.035 3.965 4 C -0.285 4.285 5 C 0.106 3.894 6 C -0.491 4.491 7 H 0.096 0.904 8 C -0.142 4.142 9 N -0.420 5.420 10 Si 0.731 3.269 11 H -0.185 1.185 12 H -0.197 1.197 13 H -0.201 1.201 14 C -0.161 4.161 15 C -0.072 4.072 16 Cl -0.086 7.086 17 C -0.017 4.017 18 N -0.434 5.434 19 H 0.067 0.933 20 H 0.066 0.934 21 H 0.101 0.899 22 H 0.124 0.876 23 H 0.091 0.909 24 H 0.150 0.850 25 H 0.215 0.785 26 H 0.213 0.787 Dipole moment (debyes) X Y Z Total from point charges -0.215 -4.819 1.522 5.059 hybrid contribution -0.192 0.692 0.037 0.719 sum -0.407 -4.128 1.559 4.431 Atomic orbital electron populations 1.22755 0.79946 1.01789 1.01077 1.85789 1.20036 1.28294 1.90706 1.17928 0.89356 0.83768 1.05493 1.20967 0.97992 0.91691 1.17848 1.17113 0.90794 0.91675 0.89821 1.19367 1.00891 0.92465 1.36352 0.90351 1.25869 0.94476 1.01238 0.92627 1.69859 1.19553 1.30303 1.22286 0.86287 0.80088 0.81271 0.79235 1.18473 1.19704 1.20076 1.20849 0.93851 0.95879 1.05563 1.19705 0.81094 0.93422 1.13004 1.98232 1.14226 1.98468 1.97717 1.16152 0.87032 0.85942 1.12598 1.41652 1.07138 1.04868 1.89711 0.93329 0.93441 0.89888 0.87559 0.90871 0.84978 0.78475 0.78746 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.62 9.81 101.05 0.99 1.61 15 2 O -0.33 -6.61 9.72 -19.65 -0.19 -6.80 15 3 C 0.08 1.87 6.70 -39.09 -0.26 1.61 15 4 C -0.26 -6.35 8.77 -38.78 -0.34 -6.69 15 5 C 0.11 2.88 5.57 -106.81 -0.60 2.28 15 6 C -0.46 -11.97 9.03 -37.89 -0.34 -12.31 15 7 H 0.08 1.95 7.91 -52.49 -0.41 1.54 15 8 C 0.08 1.87 5.13 -17.34 -0.09 1.78 15 9 N -0.79 -20.41 10.97 55.54 0.61 -19.80 15 10 Si 0.91 18.47 29.60 -169.99 -5.03 13.44 15 11 H -0.26 -5.25 7.11 56.52 0.40 -4.85 15 12 H -0.27 -5.48 7.11 56.52 0.40 -5.07 15 13 H -0.28 -5.53 7.11 56.52 0.40 -5.13 15 14 C -0.14 -3.64 8.39 -39.22 -0.33 -3.97 15 15 C -0.04 -1.00 6.29 -39.75 -0.25 -1.25 15 16 Cl -0.11 -2.33 27.54 -51.86 -1.43 -3.76 15 17 C 0.08 1.90 6.78 -83.43 -0.57 1.33 15 18 N -0.89 -16.85 9.00 32.63 0.29 -16.56 15 19 H 0.05 0.75 7.65 -51.93 -0.40 0.35 15 20 H 0.05 0.72 7.67 -51.93 -0.40 0.32 15 21 H 0.08 1.00 8.14 -51.93 -0.42 0.58 15 22 H 0.11 2.36 6.28 -52.49 -0.33 2.03 15 23 H 0.28 6.57 8.30 -40.82 -0.34 6.23 15 24 H 0.13 3.55 6.16 -52.49 -0.32 3.23 15 25 H 0.39 6.72 8.16 -40.82 -0.33 6.39 15 26 H 0.38 6.73 7.46 -40.82 -0.30 6.42 15 LS Contribution 242.35 15.07 3.65 3.65 Total: -1.00 -27.47 242.35 -5.93 -33.40 By element: Atomic # 1 Polarization: 14.09 SS G_CDS: -2.06 Total: 12.03 kcal Atomic # 6 Polarization: -13.83 SS G_CDS: -1.78 Total: -15.61 kcal Atomic # 7 Polarization: -37.26 SS G_CDS: 0.90 Total: -36.36 kcal Atomic # 8 Polarization: -6.61 SS G_CDS: -0.19 Total: -6.80 kcal Atomic # 14 Polarization: 18.47 SS G_CDS: -5.03 Total: 13.44 kcal Atomic # 17 Polarization: -2.33 SS G_CDS: -1.43 Total: -3.76 kcal Total LS contribution 3.65 Total: 3.65 kcal Total: -27.47 -5.93 -33.40 kcal The number of atoms in the molecule is 26 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000575715607.mol2 26 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.909 kcal (2) G-P(sol) polarization free energy of solvation -27.469 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.559 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.935 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.403 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.494 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.18 seconds