Wall clock time and date at job start Mon Mar 30 2020 21:09:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 N 1.32408 * 120.58556 * 2 1 4 4 C 1.32664 * 121.20209 * 180.02562 * 3 2 1 5 5 N 1.38584 * 118.94531 * 180.02562 * 4 3 2 6 6 C 1.46499 * 120.00064 * 179.97438 * 5 4 3 7 7 C 1.53000 * 109.46840 * 179.97438 * 6 5 4 8 8 C 1.50706 * 109.46735 * 180.02562 * 7 6 5 9 9 H 1.07996 * 119.99928 * 359.97438 * 8 7 6 10 10 C 1.37880 * 119.99611 * 179.97438 * 8 7 6 11 11 N 1.31511 * 120.00327 * 359.97438 * 10 8 7 12 12 Si 1.86803 * 119.99743 * 179.97438 * 10 8 7 13 13 H 1.48506 * 109.46828 * 90.00241 * 12 10 8 14 14 H 1.48494 * 109.47178 * 209.99936 * 12 10 8 15 15 H 1.48500 * 109.47075 * 330.00183 * 12 10 8 16 16 N 1.32254 * 122.11466 * 0.26911 * 4 3 2 17 17 C 1.33227 * 120.28785 * 359.45183 * 16 4 3 18 18 N 1.35470 * 134.67618 * 180.17321 * 17 16 4 19 19 C 1.30187 * 108.89601 * 180.32938 * 18 17 16 20 20 O 1.34124 * 110.29355 * 0.02562 * 19 18 17 21 21 C 1.34927 * 108.07270 * 359.97438 * 20 19 18 22 22 H 1.08997 * 109.47207 * 89.99964 * 1 2 3 23 23 H 1.09005 * 109.46835 * 210.00010 * 1 2 3 24 24 H 1.09003 * 109.46972 * 329.99995 * 1 2 3 25 25 H 0.97000 * 119.99515 * 359.97438 * 5 4 3 26 26 H 1.09002 * 109.47391 * 59.99547 * 6 5 4 27 27 H 1.09001 * 109.46813 * 299.99603 * 6 5 4 28 28 H 1.09001 * 109.47194 * 299.99493 * 7 6 5 29 29 H 1.08992 * 109.47399 * 59.99666 * 7 6 5 30 30 H 0.97000 * 120.00354 * 180.02562 * 11 10 8 31 31 H 1.07997 * 124.85093 * 179.97438 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 7 2.1807 1.1399 0.0000 4 6 3.5072 1.1541 -0.0005 5 7 4.1649 2.3740 0.0001 6 6 5.6292 2.4168 0.0001 7 6 6.0968 3.8735 0.0001 8 6 7.6033 3.9175 -0.0005 9 1 8.1703 2.9983 -0.0004 10 6 8.2575 5.1312 -0.0011 11 7 7.5670 6.2504 -0.0017 12 14 10.1247 5.1857 -0.0011 13 1 10.6194 5.1995 -1.4013 14 1 10.5841 6.4124 0.6982 15 1 10.6549 3.9885 0.6995 16 7 4.2223 0.0416 -0.0063 17 6 3.6179 -1.1457 -0.0009 18 7 4.0443 -2.4315 -0.0013 19 6 3.0079 -3.2194 -0.0011 20 8 1.8762 -2.4994 -0.0011 21 6 2.2116 -1.1925 -0.0008 22 1 -0.3633 0.0000 -1.0276 23 1 -0.3633 -0.8900 0.5139 24 1 -0.3633 0.8900 0.5138 25 1 3.6555 3.1995 0.0004 26 1 6.0074 1.9141 -0.8901 27 1 6.0073 1.9134 0.8899 28 1 5.7187 4.3765 -0.8899 29 1 5.7186 4.3765 0.8900 30 1 8.0272 7.1043 -0.0025 31 1 3.0529 -4.2984 -0.0017 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260034488.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 21:09:31 Heat of formation + Delta-G solvation = 69.049406 kcal Electronic energy + Delta-G solvation = -16945.377949 eV Core-core repulsion = 14036.007371 eV Total energy + Delta-G solvation = -2909.370578 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 248.101 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -43.49460 -40.08948 -36.04693 -35.41578 -33.46803 -32.74561 -31.27841 -29.16865 -28.24024 -24.96771 -24.12492 -23.07913 -21.75022 -20.77258 -19.09347 -18.51263 -17.09418 -16.85584 -16.04939 -15.64014 -14.92915 -14.80158 -14.48904 -13.92362 -13.84370 -13.37484 -13.14957 -12.60747 -12.26247 -11.94823 -11.63067 -11.18041 -11.09319 -10.96239 -10.62316 -10.57952 -9.78143 -9.65922 -9.61962 -9.31020 -9.03472 -8.42951 -7.72700 -6.08023 -4.10956 0.43610 1.14096 2.28425 2.31502 2.98322 3.31089 3.37074 3.41269 3.51070 3.86869 4.06821 4.32444 4.42619 4.59395 4.95266 5.29163 5.29840 5.41086 5.43882 5.52649 5.81144 5.93265 6.29267 6.35404 6.74329 6.83323 7.24385 7.31071 7.52897 7.62051 7.76602 7.90816 8.26242 8.50699 8.94856 9.53763 11.03680 Molecular weight = 248.10amu Principal moments of inertia in cm(-1) A = 0.039851 B = 0.004282 C = 0.003880 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 702.446524 B = 6537.803896 C = 7214.500900 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.106 4.106 2 C 0.275 3.725 3 N -0.544 5.544 4 C 0.582 3.418 5 N -0.676 5.676 6 C 0.135 3.865 7 C 0.011 3.989 8 C -0.520 4.520 9 H 0.060 0.940 10 C 0.059 3.941 11 N -0.894 5.894 12 Si 0.897 3.103 13 H -0.279 1.279 14 H -0.286 1.286 15 H -0.272 1.272 16 N -0.534 5.534 17 C 0.326 3.674 18 N -0.487 5.487 19 C 0.268 3.732 20 O -0.204 6.204 21 C -0.181 4.181 22 H 0.090 0.910 23 H 0.082 0.918 24 H 0.089 0.911 25 H 0.416 0.584 26 H 0.060 0.940 27 H 0.059 0.941 28 H 0.024 0.976 29 H 0.024 0.976 30 H 0.262 0.738 31 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.040 -16.202 -0.002 22.107 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C 0.118 3.882 3 N -0.268 5.268 4 C 0.223 3.777 5 N -0.311 5.311 6 C 0.013 3.987 7 C -0.026 4.026 8 C -0.559 4.559 9 H 0.079 0.921 10 C -0.143 4.143 11 N -0.533 5.533 12 Si 0.725 3.275 13 H -0.206 1.206 14 H -0.212 1.212 15 H -0.197 1.197 16 N -0.264 5.264 17 C 0.078 3.922 18 N -0.219 5.219 19 C 0.034 3.966 20 O -0.091 6.091 21 C -0.240 4.240 22 H 0.108 0.892 23 H 0.101 0.899 24 H 0.108 0.892 25 H 0.254 0.746 26 H 0.078 0.922 27 H 0.078 0.922 28 H 0.042 0.958 29 H 0.042 0.958 30 H 0.072 0.928 31 H 0.279 0.721 Dipole moment (debyes) X Y Z Total from point charges -13.618 -15.253 -0.002 20.447 hybrid contribution -0.055 -0.291 -0.020 0.297 sum -13.673 -15.544 -0.022 20.701 Atomic orbital electron populations 1.20832 0.87001 1.04406 1.04097 1.20442 0.96909 0.82666 0.88152 1.68049 1.08426 1.27002 1.23357 1.19216 0.83631 0.86940 0.87926 1.44902 1.08518 1.02335 1.75334 1.21836 0.74228 1.01482 1.01190 1.19352 0.96816 0.88396 0.98040 1.21017 0.90769 0.92692 1.51437 0.92134 1.24992 0.98720 0.95572 0.94966 1.69956 1.35578 0.97424 1.50309 0.86502 0.85203 0.77596 0.78203 1.20552 1.21174 1.19685 1.67069 1.39133 0.94856 1.25381 1.20076 0.86531 0.91233 0.94330 1.70457 1.30427 0.99032 1.22004 1.28709 0.76894 0.99965 0.91051 1.84426 1.35355 1.15224 1.74074 1.21385 0.98195 0.84826 1.19574 0.89171 0.89920 0.89176 0.74636 0.92216 0.92219 0.95805 0.95795 0.92826 0.72067 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.92 10.22 36.00 0.37 -0.55 16 2 C 0.28 3.77 6.84 -82.25 -0.56 3.21 16 3 N -0.54 -8.90 10.38 -10.12 -0.11 -9.01 16 4 C 0.58 10.94 8.42 -322.64 -2.72 8.22 16 5 N -0.68 -12.90 5.71 -62.27 -0.36 -13.26 16 6 C 0.13 2.94 5.58 -4.04 -0.02 2.91 16 7 C 0.01 0.29 5.09 -27.88 -0.14 0.15 16 8 C -0.52 -14.57 9.11 -34.44 -0.31 -14.89 16 9 H 0.06 1.66 7.74 -52.49 -0.41 1.25 16 10 C 0.06 1.68 5.46 -17.82 -0.10 1.58 16 11 N -0.89 -26.39 13.29 55.43 0.74 -25.65 16 12 Si 0.90 21.58 29.54 -169.99 -5.02 16.56 16 13 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 14 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 15 H -0.27 -6.44 7.11 56.52 0.40 -6.04 16 16 N -0.53 -10.64 9.63 -13.52 -0.13 -10.77 16 17 C 0.33 5.69 8.44 -157.04 -1.33 4.36 16 18 N -0.49 -7.22 11.32 -14.04 -0.16 -7.38 16 19 C 0.27 2.45 13.13 52.07 0.68 3.13 16 20 O -0.20 -2.23 10.77 4.45 0.05 -2.18 16 21 C -0.18 -2.61 7.18 -38.55 -0.28 -2.88 16 22 H 0.09 0.66 8.14 -51.93 -0.42 0.23 16 23 H 0.08 0.58 8.10 -51.93 -0.42 0.16 16 24 H 0.09 0.72 8.14 -51.93 -0.42 0.30 16 25 H 0.42 7.28 8.59 -40.82 -0.35 6.93 16 26 H 0.06 1.34 8.14 -51.93 -0.42 0.92 16 27 H 0.06 1.34 8.14 -51.93 -0.42 0.92 16 28 H 0.02 0.62 8.14 -51.93 -0.42 0.20 16 29 H 0.02 0.63 8.14 -51.93 -0.42 0.20 16 30 H 0.26 7.30 8.31 -40.82 -0.34 6.97 16 31 H 0.26 0.58 8.06 -52.49 -0.42 0.15 16 LS Contribution 281.05 15.07 4.24 4.24 Total: -1.00 -34.21 281.05 -8.43 -42.63 By element: Atomic # 1 Polarization: 2.85 SS G_CDS: -3.27 Total: -0.42 kcal Atomic # 6 Polarization: 9.65 SS G_CDS: -4.40 Total: 5.25 kcal Atomic # 7 Polarization: -66.05 SS G_CDS: -0.01 Total: -66.07 kcal Atomic # 8 Polarization: -2.23 SS G_CDS: 0.05 Total: -2.18 kcal Atomic # 14 Polarization: 21.58 SS G_CDS: -5.02 Total: 16.56 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -34.21 -8.43 -42.63 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260034488.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 111.682 kcal (2) G-P(sol) polarization free energy of solvation -34.205 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.477 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.427 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.633 kcal (6) G-S(sol) free energy of system = (1) + (5) 69.049 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds