Wall clock time and date at job start Thu Apr 9 2020 11:49:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.41380 * 126.80028 * 2 1 4 4 C 1.35448 * 103.98449 * 180.09880 * 3 2 1 5 5 C 1.50701 * 126.77479 * 179.91002 * 4 3 2 6 6 N 1.46901 * 109.46921 * 89.70898 * 5 4 3 7 7 C 1.46906 * 110.99793 * 179.97438 * 6 5 4 8 8 H 1.09003 * 109.47279 * 325.00167 * 7 6 5 9 9 C 1.52995 * 109.46946 * 85.00144 * 7 6 5 10 10 C 1.50701 * 109.46893 * 205.00308 * 7 6 5 11 11 H 1.07996 * 120.00253 * 0.02562 * 10 7 6 12 12 C 1.37878 * 119.99674 * 180.02562 * 10 7 6 13 13 N 1.31513 * 120.00353 * 359.97438 * 12 10 7 14 14 Si 1.86796 * 119.99967 * 179.97438 * 12 10 7 15 15 H 1.48506 * 109.47200 * 359.97438 * 14 12 10 16 16 H 1.48506 * 109.47268 * 119.99842 * 14 12 10 17 17 H 1.48506 * 109.47301 * 239.99804 * 14 12 10 18 18 O 1.34037 * 106.44709 * 359.64769 * 4 3 2 19 19 N 1.20925 * 111.56480 * 0.24221 * 18 4 3 20 20 H 1.09008 * 109.46840 * 270.28636 * 1 2 3 21 21 H 1.08997 * 109.47401 * 30.28320 * 1 2 3 22 22 H 1.08993 * 109.47238 * 150.29200 * 1 2 3 23 23 H 1.08011 * 128.00576 * 0.02562 * 3 2 1 24 24 H 1.09002 * 109.47060 * 209.71079 * 5 4 3 25 25 H 1.09001 * 109.47380 * 329.71167 * 5 4 3 26 26 H 1.00898 * 110.99877 * 56.04636 * 6 5 4 27 27 H 1.09003 * 109.47112 * 59.99921 * 9 7 6 28 28 H 1.09001 * 109.47056 * 179.97438 * 9 7 6 29 29 H 1.09000 * 109.47395 * 299.99746 * 9 7 6 30 30 H 0.97002 * 120.00598 * 179.97438 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3539 1.1321 0.0000 4 6 3.6024 0.6068 -0.0023 5 6 4.9021 1.3697 -0.0052 6 7 5.3236 1.6241 1.3789 7 6 6.5904 2.3671 1.4153 8 1 7.2218 2.0497 0.5854 9 6 6.3062 3.8657 1.2957 10 6 7.2968 2.0921 2.7177 11 1 6.8497 1.4312 3.4454 12 6 8.5139 2.6843 2.9802 13 7 9.0586 3.4888 2.0938 14 14 9.3893 2.3440 4.5949 15 1 8.5726 1.4126 5.4140 16 1 10.7138 1.7311 4.3204 17 1 9.5771 3.6181 5.3343 18 8 3.4538 -0.7252 0.0045 19 7 2.2868 -1.0422 0.0056 20 1 -0.3633 0.0051 1.0277 21 1 -0.3634 0.8874 -0.5182 22 1 -0.3633 -0.8925 -0.5093 23 1 2.0708 2.1744 0.0004 24 1 5.6663 0.7836 -0.5158 25 1 4.7653 2.3187 -0.5236 26 1 5.3949 0.7627 1.8993 27 1 5.6748 4.1832 2.1255 28 1 7.2461 4.4170 1.3231 29 1 5.7953 4.0646 0.3536 30 1 9.9148 3.9057 2.2786 RHF calculation, no. of doubly occupied orbitals= 39 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000044991355.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 11:49:45 Heat of formation + Delta-G solvation = 52.688703 kcal Electronic energy + Delta-G solvation = -13457.787003 eV Core-core repulsion = 11063.237215 eV Total energy + Delta-G solvation = -2394.549788 eV No. of doubly occupied orbitals = 39 Molecular weight (most abundant/longest-lived isotopes) = 210.111 amu Computer time = 0.17 seconds Orbital eigenvalues (eV) -44.64170 -36.25917 -34.57687 -33.21314 -31.38098 -28.58984 -28.48015 -25.51686 -24.45713 -22.78722 -19.99308 -19.77490 -17.31717 -17.17666 -16.33479 -15.06778 -14.44078 -14.35558 -13.67473 -13.34938 -13.17626 -12.94547 -12.77916 -12.21226 -12.04094 -11.31118 -11.03163 -10.88074 -10.77260 -10.36717 -10.21097 -10.12387 -9.82112 -9.15112 -8.87772 -8.53595 -7.47054 -6.08377 -4.15031 1.71704 2.44073 3.26777 3.34748 3.36469 3.40011 4.34634 4.37073 4.65130 5.22254 5.27025 5.33502 5.40159 5.42995 5.51749 5.74785 5.82475 6.04524 6.09848 6.29860 6.77001 7.03930 7.10946 7.36598 7.71678 7.78808 8.16832 8.23646 8.48805 8.52113 8.93430 9.51315 10.98027 Molecular weight = 210.11amu Principal moments of inertia in cm(-1) A = 0.058626 B = 0.006166 C = 0.005923 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 477.488339 B = 4539.630250 C = 4726.263434 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 C 0.009 3.991 3 C -0.226 4.226 4 C -0.006 4.006 5 C 0.135 3.865 6 N -0.682 5.682 7 C 0.211 3.789 8 H 0.006 0.994 9 C -0.126 4.126 10 C -0.520 4.520 11 H 0.061 0.939 12 C 0.063 3.937 13 N -0.889 5.889 14 Si 0.898 3.102 15 H -0.273 1.273 16 H -0.284 1.284 17 H -0.283 1.283 18 O 0.091 5.909 19 N -0.376 5.376 20 H 0.078 0.922 21 H 0.079 0.921 22 H 0.072 0.928 23 H 0.169 0.831 24 H 0.046 0.954 25 H 0.099 0.901 26 H 0.337 0.663 27 H 0.033 0.967 28 H 0.083 0.917 29 H 0.005 0.995 30 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.288 -3.030 -4.686 12.592 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.129 4.129 2 C -0.149 4.149 3 C -0.248 4.248 4 C -0.069 4.069 5 C 0.005 3.995 6 N -0.315 5.315 7 C 0.104 3.896 8 H 0.024 0.976 9 C -0.185 4.185 10 C -0.558 4.558 11 H 0.080 0.920 12 C -0.139 4.139 13 N -0.528 5.528 14 Si 0.726 3.274 15 H -0.197 1.197 16 H -0.210 1.210 17 H -0.209 1.209 18 O 0.027 5.973 19 N -0.082 5.082 20 H 0.096 0.904 21 H 0.098 0.902 22 H 0.091 0.909 23 H 0.187 0.813 24 H 0.064 0.936 25 H 0.117 0.883 26 H 0.154 0.846 27 H 0.052 0.948 28 H 0.101 0.899 29 H 0.024 0.976 30 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -11.708 -3.671 -4.645 13.119 hybrid contribution 1.051 0.109 0.618 1.224 sum -10.656 -3.562 -4.027 11.936 Atomic orbital electron populations 1.20110 0.86329 1.03329 1.03156 1.23572 0.98805 0.89234 1.03330 1.22358 0.91116 1.00896 1.10463 1.24804 0.99043 0.82927 1.00167 1.20478 0.87697 0.96833 0.94519 1.60878 1.36739 1.25728 1.08170 1.19185 0.82894 0.90807 0.96698 0.97631 1.21742 1.01385 0.98852 0.96473 1.21261 1.03789 1.28362 1.02404 0.92035 1.24907 0.97104 0.94881 0.97024 1.69895 1.17892 1.30473 1.34543 0.86440 0.79387 0.78126 0.83455 1.19717 1.21024 1.20932 1.84789 1.21417 1.23398 1.67672 1.73797 0.89504 1.24360 1.20572 0.90376 0.90223 0.90931 0.81334 0.93578 0.88342 0.84587 0.94786 0.89874 0.97588 0.92875 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.72 10.47 36.01 0.38 -0.34 16 2 C 0.01 0.13 7.33 -82.10 -0.60 -0.47 16 3 C -0.23 -3.31 11.06 -39.38 -0.44 -3.74 16 4 C -0.01 -0.09 7.00 -35.30 -0.25 -0.34 16 5 C 0.14 2.32 6.05 -4.97 -0.03 2.29 16 6 N -0.68 -14.14 6.29 -109.21 -0.69 -14.83 16 7 C 0.21 5.15 2.60 -68.86 -0.18 4.97 16 8 H 0.01 0.16 7.80 -51.93 -0.40 -0.25 16 9 C -0.13 -3.01 9.19 37.16 0.34 -2.67 16 10 C -0.52 -13.96 8.59 -34.44 -0.30 -14.25 16 11 H 0.06 1.65 7.62 -52.49 -0.40 1.25 16 12 C 0.06 1.70 5.30 -17.82 -0.09 1.61 16 13 N -0.89 -24.83 11.32 55.43 0.63 -24.20 16 14 Si 0.90 20.98 29.54 -169.99 -5.02 15.95 16 15 H -0.27 -6.32 7.11 56.52 0.40 -5.91 16 16 H -0.28 -6.60 7.11 56.52 0.40 -6.19 16 17 H -0.28 -6.59 7.11 56.52 0.40 -6.19 16 18 O 0.09 1.57 11.20 17.18 0.19 1.77 16 19 N -0.38 -6.29 12.07 33.42 0.40 -5.89 16 20 H 0.08 0.71 8.14 -51.92 -0.42 0.29 16 21 H 0.08 0.63 8.14 -51.93 -0.42 0.21 16 22 H 0.07 0.67 8.14 -51.93 -0.42 0.25 16 23 H 0.17 2.11 8.06 -52.48 -0.42 1.69 16 24 H 0.05 0.78 8.05 -51.93 -0.42 0.36 16 25 H 0.10 1.60 7.44 -51.93 -0.39 1.21 16 26 H 0.34 7.01 8.21 -39.29 -0.32 6.69 16 27 H 0.03 0.80 8.14 -51.93 -0.42 0.38 16 28 H 0.08 2.17 6.07 -51.93 -0.32 1.86 16 29 H 0.01 0.11 7.45 -51.93 -0.39 -0.28 16 30 H 0.26 6.94 8.31 -40.82 -0.34 6.60 16 LS Contribution 260.91 15.07 3.93 3.93 Total: -1.00 -28.64 260.91 -5.60 -34.24 By element: Atomic # 1 Polarization: 5.85 SS G_CDS: -3.88 Total: 1.96 kcal Atomic # 6 Polarization: -11.77 SS G_CDS: -1.17 Total: -12.94 kcal Atomic # 7 Polarization: -45.27 SS G_CDS: 0.34 Total: -44.92 kcal Atomic # 8 Polarization: 1.57 SS G_CDS: 0.19 Total: 1.77 kcal Atomic # 14 Polarization: 20.98 SS G_CDS: -5.02 Total: 15.95 kcal Total LS contribution 3.93 Total: 3.93 kcal Total: -28.64 -5.60 -34.24 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000044991355.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.933 kcal (2) G-P(sol) polarization free energy of solvation -28.644 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.289 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.601 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.245 kcal (6) G-S(sol) free energy of system = (1) + (5) 52.689 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.17 seconds