Wall clock time and date at job start Thu Apr 9 2020 11:51:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.52998 * 109.47042 * 2 1 4 4 H 1.08997 * 109.46819 * 55.00696 * 3 2 1 5 5 C 1.52993 * 109.47444 * 295.00064 * 3 2 1 6 6 C 1.52998 * 109.47444 * 180.02562 * 5 3 2 7 7 C 1.52999 * 109.47011 * 59.99941 * 6 5 3 8 8 C 1.52999 * 109.47546 * 300.00299 * 7 6 5 9 9 C 1.53005 * 109.46941 * 59.99757 * 8 7 6 10 10 H 1.09001 * 109.46830 * 180.02562 * 9 8 7 11 11 O 1.42899 * 109.47197 * 60.00137 * 9 8 7 12 12 C 1.42903 * 113.99629 * 90.00111 * 11 9 8 13 13 C 1.50701 * 109.46878 * 179.97438 * 12 11 9 14 14 H 1.07998 * 120.00129 * 0.02562 * 13 12 11 15 15 C 1.37880 * 119.99861 * 179.97438 * 13 12 11 16 16 N 1.31510 * 119.99913 * 0.02562 * 15 13 12 17 17 Si 1.86797 * 119.99734 * 180.02562 * 15 13 12 18 18 H 1.48499 * 109.47094 * 90.00289 * 17 15 13 19 19 H 1.48505 * 109.47195 * 210.00171 * 17 15 13 20 20 H 1.48493 * 109.47449 * 330.00136 * 17 15 13 21 21 H 1.08996 * 109.47359 * 59.99817 * 1 2 3 22 22 H 1.09002 * 109.47430 * 180.02562 * 1 2 3 23 23 H 1.09005 * 109.46792 * 299.99361 * 1 2 3 24 24 H 1.09001 * 109.46769 * 240.00114 * 2 1 3 25 25 H 1.09004 * 109.47115 * 120.00302 * 2 1 3 26 26 H 1.08994 * 109.47192 * 300.00399 * 5 3 2 27 27 H 1.09002 * 109.46928 * 59.99842 * 5 3 2 28 28 H 1.08997 * 109.47560 * 180.02562 * 6 5 3 29 29 H 1.09006 * 109.46819 * 300.00342 * 6 5 3 30 30 H 1.09003 * 109.47005 * 59.99981 * 7 6 5 31 31 H 1.08995 * 109.47466 * 180.02562 * 7 6 5 32 32 H 1.09006 * 109.47145 * 300.00127 * 8 7 6 33 33 H 1.08994 * 109.47796 * 179.97438 * 8 7 6 34 34 H 1.09002 * 109.47382 * 59.99956 * 12 11 9 35 35 H 1.09001 * 109.46938 * 299.99942 * 12 11 9 36 36 H 0.97002 * 119.99768 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9814 0.8419 5 6 1.6353 2.1266 -1.3073 6 6 2.1458 3.5689 -1.3075 7 6 3.6706 3.5701 -1.1821 8 6 4.0755 2.8860 0.1252 9 6 3.5649 1.4437 0.1254 10 1 3.8530 0.9565 1.0569 11 8 4.1341 0.7367 -0.9783 12 6 5.3739 0.0923 -0.6786 13 6 5.8801 -0.6189 -1.9070 14 1 5.3122 -0.5822 -2.8248 15 6 7.0690 -1.3157 -1.8593 16 7 7.7608 -1.3600 -0.7418 17 14 7.6968 -2.1967 -3.3822 18 1 8.5556 -1.2751 -4.1685 19 1 8.4888 -3.3852 -2.9753 20 1 6.5452 -2.6303 -4.2133 21 1 -0.3634 0.5138 -0.8899 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3633 0.5138 0.8901 24 1 1.8933 -0.5138 -0.8900 25 1 1.8934 -0.5139 0.8900 26 1 2.0698 1.5876 -2.1491 27 1 0.5489 2.1252 -1.3968 28 1 1.8571 4.0564 -2.2387 29 1 1.7115 4.1081 -0.4656 30 1 4.1049 3.0308 -2.0240 31 1 4.0344 4.5976 -1.1818 32 1 3.6412 3.4253 0.9671 33 1 5.1618 2.8865 0.2143 34 1 5.2232 -0.6306 0.1232 35 1 6.1039 0.8378 -0.3632 36 1 8.5970 -1.8505 -0.7082 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000019504464.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 11:51:54 Heat of formation + Delta-G solvation = -88.206396 kcal Electronic energy + Delta-G solvation = -14886.345734 eV Core-core repulsion = 12561.915141 eV Total energy + Delta-G solvation = -2324.430593 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 212.152 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -38.96482 -35.33990 -33.55020 -32.60423 -29.61390 -28.58614 -26.84228 -23.50628 -22.45413 -21.82125 -20.25272 -18.94888 -16.48022 -15.46449 -15.02203 -14.73172 -14.41884 -13.92365 -13.77212 -13.01373 -12.79697 -12.62829 -12.22913 -12.00215 -11.63786 -11.26104 -11.14847 -10.91305 -10.82497 -10.77041 -10.61150 -10.29905 -10.08939 -10.07704 -9.78381 -9.37188 -9.02535 -8.71783 -8.04781 -6.08411 -4.09590 3.31127 3.36238 3.41435 4.37147 4.89178 5.04948 5.16604 5.28072 5.32788 5.46907 5.51641 5.58382 5.71806 5.83926 5.87958 5.95724 6.01104 6.06689 6.19082 6.20914 6.30166 6.34526 6.48209 6.59034 6.62875 6.70428 6.76958 6.85120 6.98221 7.19172 7.49826 7.82893 8.20805 8.66646 9.05435 9.55329 11.03096 Molecular weight = 212.15amu Principal moments of inertia in cm(-1) A = 0.033276 B = 0.008170 C = 0.007478 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 841.241696 B = 3426.287519 C = 3743.409694 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.118 4.118 3 C -0.078 4.078 4 H 0.066 0.934 5 C -0.109 4.109 6 C -0.115 4.115 7 C -0.113 4.113 8 C -0.139 4.139 9 C 0.093 3.907 10 H 0.047 0.953 11 O -0.380 6.380 12 C 0.196 3.804 13 C -0.511 4.511 14 H 0.065 0.935 15 C 0.056 3.944 16 N -0.899 5.899 17 Si 0.905 3.095 18 H -0.279 1.279 19 H -0.286 1.286 20 H -0.272 1.272 21 H 0.054 0.946 22 H 0.048 0.952 23 H 0.046 0.954 24 H 0.075 0.925 25 H 0.056 0.944 26 H 0.074 0.926 27 H 0.053 0.947 28 H 0.054 0.946 29 H 0.051 0.949 30 H 0.075 0.925 31 H 0.049 0.951 32 H 0.056 0.944 33 H 0.063 0.937 34 H 0.002 0.998 35 H 0.002 0.998 36 H 0.263 0.737 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.148 6.770 1.742 13.158 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.156 4.156 3 C -0.097 4.097 4 H 0.085 0.915 5 C -0.147 4.147 6 C -0.152 4.152 7 C -0.150 4.150 8 C -0.176 4.176 9 C 0.034 3.966 10 H 0.065 0.935 11 O -0.299 6.299 12 C 0.121 3.879 13 C -0.550 4.550 14 H 0.083 0.917 15 C -0.145 4.145 16 N -0.538 5.538 17 Si 0.733 3.267 18 H -0.205 1.205 19 H -0.211 1.211 20 H -0.197 1.197 21 H 0.073 0.927 22 H 0.067 0.933 23 H 0.066 0.934 24 H 0.094 0.906 25 H 0.074 0.926 26 H 0.093 0.907 27 H 0.072 0.928 28 H 0.073 0.927 29 H 0.070 0.930 30 H 0.093 0.907 31 H 0.068 0.932 32 H 0.074 0.926 33 H 0.081 0.919 34 H 0.020 0.980 35 H 0.020 0.980 36 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -11.065 6.677 1.634 13.026 hybrid contribution 0.711 -0.462 -0.322 0.907 sum -10.354 6.215 1.312 12.147 Atomic orbital electron populations 1.21822 0.96728 1.00982 1.01199 1.21494 0.94573 0.96558 1.02943 1.21220 0.94535 0.96068 0.97850 0.91546 1.21521 0.99205 0.95397 0.98557 1.21497 0.96288 0.96882 1.00540 1.21390 0.95371 0.99207 0.99039 1.21993 1.01191 0.97003 0.97451 1.21844 0.92329 0.91438 0.91036 0.93530 1.87876 1.39765 1.68325 1.33976 1.20185 0.80044 0.90893 0.96738 1.21059 1.05733 1.30993 0.97190 0.91665 1.24941 0.96377 0.96548 0.96666 1.69965 1.15286 1.42584 1.25995 0.86378 0.78841 0.79003 0.82517 1.20525 1.21128 1.19659 0.92738 0.93255 0.93448 0.90616 0.92554 0.90747 0.92817 0.92712 0.92995 0.90669 0.93222 0.92555 0.91868 0.98011 0.97970 0.92740 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.87 9.67 37.16 0.36 -1.51 16 2 C -0.12 -1.84 5.18 -26.73 -0.14 -1.98 16 3 C -0.08 -1.22 2.02 -90.62 -0.18 -1.40 16 4 H 0.07 0.93 8.14 -51.93 -0.42 0.50 16 5 C -0.11 -1.62 4.81 -26.74 -0.13 -1.75 16 6 C -0.11 -1.58 5.92 -26.73 -0.16 -1.74 16 7 C -0.11 -1.79 5.78 -26.73 -0.15 -1.94 16 8 C -0.14 -2.35 5.63 -26.73 -0.15 -2.50 16 9 C 0.09 1.74 2.35 -26.73 -0.06 1.68 16 10 H 0.05 0.90 7.79 -51.93 -0.40 0.50 16 11 O -0.38 -8.90 8.04 -35.23 -0.28 -9.19 16 12 C 0.20 5.35 5.50 36.01 0.20 5.55 16 13 C -0.51 -15.04 9.43 -34.44 -0.32 -15.36 16 14 H 0.07 1.91 7.81 -52.49 -0.41 1.50 16 15 C 0.06 1.61 5.46 -17.82 -0.10 1.52 16 16 N -0.90 -27.07 13.29 55.43 0.74 -26.34 16 17 Si 0.91 21.99 29.54 -169.99 -5.02 16.97 16 18 H -0.28 -6.66 7.11 56.52 0.40 -6.26 16 19 H -0.29 -6.80 7.11 56.52 0.40 -6.40 16 20 H -0.27 -6.49 7.11 56.52 0.40 -6.08 16 21 H 0.05 0.65 6.56 -51.93 -0.34 0.31 16 22 H 0.05 0.57 8.14 -51.93 -0.42 0.15 16 23 H 0.05 0.53 8.14 -51.93 -0.42 0.11 16 24 H 0.08 1.36 7.83 -51.93 -0.41 0.95 16 25 H 0.06 0.89 8.14 -51.93 -0.42 0.46 16 26 H 0.07 1.28 7.68 -51.93 -0.40 0.88 16 27 H 0.05 0.69 6.56 -51.93 -0.34 0.35 16 28 H 0.05 0.69 8.14 -51.93 -0.42 0.27 16 29 H 0.05 0.65 8.14 -51.93 -0.42 0.22 16 30 H 0.07 1.39 7.68 -51.93 -0.40 0.99 16 31 H 0.05 0.70 8.14 -51.93 -0.42 0.28 16 32 H 0.06 0.82 8.14 -51.93 -0.42 0.40 16 33 H 0.06 1.16 7.87 -51.93 -0.41 0.76 16 34 H 0.00 0.06 8.09 -51.93 -0.42 -0.36 16 35 H 0.00 0.07 7.87 -51.93 -0.41 -0.34 16 36 H 0.26 7.43 8.31 -40.82 -0.34 7.09 16 LS Contribution 283.14 15.07 4.27 4.27 Total: -1.00 -29.86 283.14 -7.60 -37.45 By element: Atomic # 1 Polarization: 2.73 SS G_CDS: -6.45 Total: -3.73 kcal Atomic # 6 Polarization: -18.59 SS G_CDS: -0.84 Total: -19.44 kcal Atomic # 7 Polarization: -27.07 SS G_CDS: 0.74 Total: -26.34 kcal Atomic # 8 Polarization: -8.90 SS G_CDS: -0.28 Total: -9.19 kcal Atomic # 14 Polarization: 21.99 SS G_CDS: -5.02 Total: 16.97 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -29.86 -7.60 -37.45 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000019504464.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.754 kcal (2) G-P(sol) polarization free energy of solvation -29.855 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.609 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.597 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.452 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.206 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds