Wall clock time and date at job start Thu Apr 9 2020 11:51:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.45644 * 117.70674 * 2 1 4 4 C 1.53182 * 110.66597 * 157.95425 * 3 2 1 5 5 N 1.47266 * 108.06896 * 47.05691 * 4 3 2 6 6 C 1.36940 * 121.34973 * 118.36471 * 5 4 3 7 7 H 1.07997 * 119.99556 * 150.87863 * 6 5 4 8 8 C 1.38806 * 120.00092 * 330.87661 * 6 5 4 9 9 N 1.31625 * 120.00166 * 342.77200 * 8 6 5 10 10 Si 1.86801 * 120.00079 * 162.77627 * 8 6 5 11 11 H 1.48498 * 109.46713 * 359.97438 * 10 8 6 12 12 H 1.48503 * 109.47382 * 119.99923 * 10 8 6 13 13 H 1.48497 * 109.46945 * 239.99935 * 10 8 6 14 14 C 1.47042 * 117.29201 * 298.33617 * 5 4 3 15 15 C 1.52997 * 109.57320 * 282.91755 * 14 5 4 16 16 C 1.53003 * 109.56830 * 162.56060 * 14 5 4 17 17 C 1.33382 * 117.70407 * 180.25586 * 2 1 3 18 18 O 1.21284 * 118.48800 * 4.28039 * 17 2 1 19 19 H 1.09000 * 109.47257 * 179.73578 * 1 2 3 20 20 H 1.09000 * 109.46530 * 59.74067 * 1 2 3 21 21 H 1.08995 * 109.47682 * 299.74251 * 1 2 3 22 22 H 1.08997 * 109.21872 * 278.45034 * 3 2 1 23 23 H 1.09000 * 109.21533 * 37.78127 * 3 2 1 24 24 H 1.09003 * 109.90514 * 287.34034 * 4 3 2 25 25 H 1.08999 * 109.64633 * 166.62157 * 4 3 2 26 26 H 0.96999 * 119.99886 * 179.97438 * 9 8 6 27 27 H 1.08998 * 109.47048 * 179.40700 * 15 14 5 28 28 H 1.08994 * 109.46943 * 299.40969 * 15 14 5 29 29 H 1.08997 * 109.46968 * 59.40625 * 15 14 5 30 30 H 1.09002 * 109.46874 * 300.60312 * 16 14 5 31 31 H 1.09002 * 109.46883 * 60.59057 * 16 14 5 32 32 H 1.08998 * 109.47436 * 180.59613 * 16 14 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1421 1.2894 0.0000 4 6 3.5696 1.1504 0.5380 5 7 4.1972 -0.0051 -0.1252 6 6 5.3106 0.1413 -0.9088 7 1 6.0176 -0.6701 -0.9994 8 6 5.5306 1.3325 -1.5865 9 7 4.5413 2.1830 -1.7608 10 14 7.2308 1.7287 -2.2513 11 1 8.1609 0.6179 -1.9252 12 1 7.1590 1.8985 -3.7248 13 1 7.7242 2.9849 -1.6318 14 6 3.5799 -1.3224 0.0887 15 6 3.9588 -1.8469 1.4752 16 6 4.0705 -2.2983 -0.9827 17 6 2.0851 -1.1809 -0.0053 18 8 1.4129 -2.1869 -0.0893 19 1 -0.3634 -1.0276 -0.0047 20 1 -0.3632 0.5179 -0.8877 21 1 -0.3634 0.5098 0.8922 22 1 2.1750 1.6774 -1.0181 23 1 1.5887 1.9853 0.6306 24 1 3.5459 0.9879 1.6156 25 1 4.1353 2.0549 0.3142 26 1 4.6951 3.0156 -2.2341 27 1 3.4918 -2.8186 1.6361 28 1 5.0419 -1.9488 1.5415 29 1 3.6124 -1.1469 2.2355 30 1 3.8037 -1.9191 -1.9691 31 1 5.1536 -2.3996 -0.9132 32 1 3.6039 -3.2713 -0.8290 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000087289230.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 11:51:27 Heat of formation + Delta-G solvation = -5.728212 kcal Electronic energy + Delta-G solvation = -15348.268407 eV Core-core repulsion = 12923.873993 eV Total energy + Delta-G solvation = -2424.394414 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 212.127 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -39.76209 -36.13602 -35.02356 -32.46476 -30.18053 -28.20692 -26.56500 -26.24115 -24.27535 -21.85447 -21.08565 -17.71440 -16.41310 -16.20541 -15.30591 -14.96520 -14.61124 -13.80192 -13.40033 -13.20455 -12.67659 -12.29989 -12.11542 -11.75294 -11.44426 -11.40493 -11.21397 -11.04355 -10.92432 -10.72179 -10.46061 -10.25341 -9.99506 -9.75252 -8.99738 -8.58631 -7.94573 -6.78164 -5.92731 -3.37197 3.31084 3.40330 3.41886 3.44726 3.81386 4.38402 5.20800 5.24844 5.37643 5.72827 5.83331 5.92434 5.95525 6.02510 6.22471 6.28425 6.36789 6.45254 6.49303 6.58505 6.69348 6.85500 7.04401 7.08470 7.27046 7.29471 7.71800 8.22803 8.28663 8.93572 9.05449 9.66174 10.24465 11.16007 Molecular weight = 212.13amu Principal moments of inertia in cm(-1) A = 0.037493 B = 0.012642 C = 0.010726 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 746.631708 B = 2214.303217 C = 2609.741123 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.069 3.931 2 N -0.600 5.600 3 C 0.103 3.897 4 C 0.149 3.851 5 N -0.581 5.581 6 C -0.247 4.247 7 H 0.073 0.927 8 C 0.005 3.995 9 N -0.900 5.900 10 Si 0.906 3.094 11 H -0.277 1.277 12 H -0.290 1.290 13 H -0.289 1.289 14 C 0.179 3.821 15 C -0.144 4.144 16 C -0.119 4.119 17 C 0.516 3.484 18 O -0.581 6.581 19 H 0.083 0.917 20 H 0.051 0.949 21 H 0.050 0.950 22 H 0.085 0.915 23 H 0.049 0.951 24 H 0.012 0.988 25 H 0.108 0.892 26 H 0.255 0.745 27 H 0.051 0.949 28 H 0.064 0.936 29 H 0.047 0.953 30 H 0.057 0.943 31 H 0.065 0.935 32 H 0.051 0.949 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.952 -1.344 4.115 5.239 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.331 5.331 3 C -0.021 4.021 4 C 0.023 3.977 5 N -0.305 5.305 6 C -0.376 4.376 7 H 0.090 0.910 8 C -0.194 4.194 9 N -0.544 5.544 10 Si 0.736 3.264 11 H -0.202 1.202 12 H -0.217 1.217 13 H -0.215 1.215 14 C 0.087 3.913 15 C -0.204 4.204 16 C -0.177 4.177 17 C 0.304 3.696 18 O -0.461 6.461 19 H 0.102 0.898 20 H 0.070 0.930 21 H 0.068 0.932 22 H 0.103 0.897 23 H 0.067 0.933 24 H 0.030 0.970 25 H 0.126 0.874 26 H 0.065 0.935 27 H 0.070 0.930 28 H 0.083 0.917 29 H 0.066 0.934 30 H 0.077 0.923 31 H 0.084 0.916 32 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges -3.239 -1.674 3.963 5.385 hybrid contribution 0.647 0.608 -0.466 1.003 sum -2.593 -1.065 3.498 4.482 Atomic orbital electron populations 1.21666 0.81926 1.03568 1.00334 1.47265 1.06328 1.07341 1.72180 1.22104 0.94811 0.82047 1.03111 1.21203 0.90718 0.94155 0.91639 1.44354 1.31026 1.00211 1.54887 1.19154 0.96777 1.00543 1.21135 0.90954 1.25059 0.97617 0.99046 0.97640 1.69957 1.29399 1.11253 1.43827 0.86170 0.83964 0.78082 0.78221 1.20169 1.21736 1.21525 1.20085 0.86466 0.89269 0.95438 1.22106 1.01799 0.99782 0.96712 1.21672 1.01070 0.96781 0.98223 1.21185 0.92003 0.82270 0.74102 1.90545 1.66664 1.36397 1.52510 0.89808 0.93030 0.93153 0.89668 0.93281 0.96977 0.87379 0.93523 0.92951 0.91709 0.93408 0.92347 0.91629 0.92954 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 1.17 10.43 59.85 0.62 1.80 16 2 N -0.60 -12.51 3.20 -182.66 -0.58 -13.09 16 3 C 0.10 2.13 6.52 -4.41 -0.03 2.10 16 4 C 0.15 3.32 5.56 -3.53 -0.02 3.30 16 5 N -0.58 -13.90 2.63 -158.69 -0.42 -14.32 16 6 C -0.25 -6.33 8.63 -15.06 -0.13 -6.46 16 7 H 0.07 1.83 6.56 -52.49 -0.34 1.49 16 8 C 0.01 0.13 4.95 -17.43 -0.09 0.05 16 9 N -0.90 -23.84 10.38 55.49 0.58 -23.27 16 10 Si 0.91 20.62 29.59 -169.99 -5.03 15.59 16 11 H -0.28 -6.21 7.11 56.52 0.40 -5.81 16 12 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 13 H -0.29 -6.60 7.11 56.52 0.40 -6.20 16 14 C 0.18 3.93 0.99 -132.80 -0.13 3.80 16 15 C -0.14 -2.76 8.68 37.16 0.32 -2.43 16 16 C -0.12 -2.51 7.41 37.16 0.28 -2.24 16 17 C 0.52 11.69 6.35 -11.73 -0.07 11.61 16 18 O -0.58 -13.87 15.35 5.55 0.09 -13.79 16 19 H 0.08 1.50 6.59 -51.93 -0.34 1.15 16 20 H 0.05 0.81 8.14 -51.93 -0.42 0.39 16 21 H 0.05 0.73 8.14 -51.93 -0.42 0.31 16 22 H 0.09 1.98 7.34 -51.93 -0.38 1.60 16 23 H 0.05 0.86 8.07 -51.93 -0.42 0.45 16 24 H 0.01 0.26 7.50 -51.93 -0.39 -0.13 16 25 H 0.11 2.62 5.93 -51.93 -0.31 2.31 16 26 H 0.25 6.57 8.31 -40.82 -0.34 6.23 16 27 H 0.05 0.94 8.14 -51.93 -0.42 0.51 16 28 H 0.06 1.19 8.14 -51.93 -0.42 0.76 16 29 H 0.05 0.89 7.48 -51.93 -0.39 0.50 16 30 H 0.06 1.33 8.13 -51.93 -0.42 0.90 16 31 H 0.06 1.31 6.83 -51.93 -0.35 0.96 16 32 H 0.05 1.02 7.87 -51.93 -0.41 0.61 16 LS Contribution 255.15 15.07 3.85 3.85 Total: -1.00 -28.47 255.15 -5.36 -33.83 By element: Atomic # 1 Polarization: 4.26 SS G_CDS: -4.58 Total: -0.32 kcal Atomic # 6 Polarization: 10.77 SS G_CDS: 0.75 Total: 11.53 kcal Atomic # 7 Polarization: -50.25 SS G_CDS: -0.43 Total: -50.68 kcal Atomic # 8 Polarization: -13.87 SS G_CDS: 0.09 Total: -13.79 kcal Atomic # 14 Polarization: 20.62 SS G_CDS: -5.03 Total: 15.59 kcal Total LS contribution 3.85 Total: 3.85 kcal Total: -28.47 -5.36 -33.83 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000087289230.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.099 kcal (2) G-P(sol) polarization free energy of solvation -28.471 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.372 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.356 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.827 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.728 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds