Wall clock time and date at job start Thu Apr 9 2020 11:52:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.46497 * 119.99969 * 2 1 4 4 C 1.53001 * 109.46900 * 90.00221 * 3 2 1 5 5 H 1.08999 * 109.47164 * 60.00014 * 4 3 2 6 6 O 1.42903 * 109.47171 * 299.99748 * 4 3 2 7 7 C 1.53003 * 109.47376 * 180.02562 * 4 3 2 8 8 C 1.53003 * 117.49796 * 248.74870 * 7 4 3 9 9 C 1.52999 * 117.50160 * 180.08544 * 7 4 3 10 10 C 1.34777 * 120.00156 * 180.02562 * 2 1 3 11 11 O 1.21690 * 119.99966 * 179.97438 * 10 2 1 12 12 C 1.46377 * 119.99887 * 0.02562 * 10 2 1 13 13 H 1.07995 * 120.00233 * 359.97438 * 12 10 2 14 14 C 1.40048 * 119.99744 * 179.97438 * 12 10 2 15 15 N 1.30674 * 120.00193 * 359.97438 * 14 12 10 16 16 Si 1.86800 * 120.00048 * 179.97438 * 14 12 10 17 17 H 1.48502 * 109.46728 * 60.00320 * 16 14 12 18 18 H 1.48495 * 109.47259 * 180.02562 * 16 14 12 19 19 H 1.48504 * 109.47206 * 300.00444 * 16 14 12 20 20 H 1.08999 * 109.47279 * 89.99778 * 1 2 3 21 21 H 1.09004 * 109.47039 * 209.99535 * 1 2 3 22 22 H 1.08997 * 109.47422 * 329.99508 * 1 2 3 23 23 H 1.08999 * 109.47200 * 330.00257 * 3 2 1 24 24 H 1.08997 * 109.47487 * 210.00311 * 3 2 1 25 25 H 0.96700 * 114.00311 * 300.00378 * 6 4 3 26 26 H 1.09002 * 115.54826 * 34.41110 * 7 4 3 27 27 H 1.09000 * 117.49626 * 359.97438 * 8 7 4 28 28 H 1.09000 * 117.49901 * 145.01813 * 8 7 4 29 29 H 1.08998 * 117.50055 * 214.97770 * 9 7 4 30 30 H 1.09001 * 117.49592 * 359.97370 * 9 7 4 31 31 H 0.96996 * 119.99985 * 179.97438 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4525 1.7103 1.4425 5 1 3.0416 0.9506 1.9563 6 8 1.2039 1.8812 2.1162 7 6 3.2169 3.0357 1.4427 8 6 4.6657 3.0156 1.9344 9 6 3.5719 3.6464 2.7998 10 6 2.1389 -1.1672 -0.0005 11 8 3.3558 -1.1671 -0.0010 12 6 1.4070 -2.4349 -0.0017 13 1 0.3271 -2.4349 -0.0017 14 6 2.1073 -3.6477 -0.0027 15 7 3.4141 -3.6476 -0.0032 16 14 1.1734 -5.2655 -0.0035 17 1 0.3193 -5.3433 -1.2158 18 1 2.1384 -6.3941 -0.0040 19 1 0.3201 -5.3450 1.2093 20 1 -0.3634 0.0000 -1.0276 21 1 -0.3633 -0.8901 0.5138 22 1 -0.3634 0.8899 0.5139 23 1 1.6084 2.0284 -0.5138 24 1 3.1499 1.1385 -0.5139 25 1 0.6267 2.5439 1.7127 26 1 2.9703 3.7207 0.6315 27 1 5.0740 2.0582 2.2582 28 1 5.3720 3.6877 1.4470 29 1 3.5591 4.7333 2.8814 30 1 3.2603 3.1042 3.6926 31 1 3.8991 -4.4877 -0.0036 RHF calculation, no. of doubly occupied orbitals= 40 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000388595527.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 11:52:33 Heat of formation + Delta-G solvation = -63.118768 kcal Electronic energy + Delta-G solvation = -14521.824603 eV Core-core repulsion = 11997.222885 eV Total energy + Delta-G solvation = -2524.601717 eV No. of doubly occupied orbitals = 40 Molecular weight (most abundant/longest-lived isotopes) = 213.115 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -38.64685 -37.09373 -35.15695 -33.51185 -32.39854 -29.33460 -26.16557 -25.22022 -22.94376 -22.17322 -20.55392 -19.13725 -16.60584 -16.08278 -15.56348 -15.52787 -14.86803 -14.30126 -13.82981 -13.64967 -13.14021 -12.35930 -12.26197 -11.50756 -11.38889 -11.34060 -11.19719 -10.98151 -10.92366 -10.63634 -10.31694 -10.23550 -10.11706 -10.00716 -9.63681 -8.81080 -7.56133 -7.11043 -6.16296 -4.60924 3.17622 3.22262 3.24178 3.88110 4.11737 4.50086 4.61289 4.86496 4.97228 5.09711 5.28188 5.51071 5.65844 5.72630 5.77307 5.90872 6.03052 6.13453 6.23491 6.29737 6.37434 6.58195 6.62968 6.68351 7.47838 7.67268 8.02811 8.19168 8.39883 9.05354 9.46350 10.60837 10.79699 Molecular weight = 213.12amu Principal moments of inertia in cm(-1) A = 0.046735 B = 0.007941 C = 0.007299 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 598.981345 B = 3525.030572 C = 3835.255342 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.107 3.893 2 N -0.642 5.642 3 C 0.103 3.897 4 C 0.121 3.879 5 H 0.102 0.898 6 O -0.552 6.552 7 C -0.188 4.188 8 C -0.172 4.172 9 C -0.170 4.170 10 C 0.556 3.444 11 O -0.580 6.580 12 C -0.543 4.543 13 H 0.072 0.928 14 C 0.087 3.913 15 N -0.769 5.769 16 Si 0.907 3.093 17 H -0.268 1.268 18 H -0.281 1.281 19 H -0.268 1.268 20 H 0.026 0.974 21 H 0.070 0.930 22 H 0.044 0.956 23 H 0.053 0.947 24 H 0.081 0.919 25 H 0.362 0.638 26 H 0.101 0.899 27 H 0.098 0.902 28 H 0.092 0.908 29 H 0.089 0.911 30 H 0.096 0.904 31 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.596 10.480 1.854 11.234 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.037 4.037 2 N -0.379 5.379 3 C -0.022 4.022 4 C 0.061 3.939 5 H 0.119 0.881 6 O -0.356 6.356 7 C -0.207 4.207 8 C -0.209 4.209 9 C -0.208 4.208 10 C 0.362 3.638 11 O -0.463 6.463 12 C -0.579 4.579 13 H 0.090 0.910 14 C -0.133 4.133 15 N -0.397 5.397 16 Si 0.731 3.269 17 H -0.193 1.193 18 H -0.206 1.206 19 H -0.193 1.193 20 H 0.044 0.956 21 H 0.088 0.912 22 H 0.062 0.938 23 H 0.071 0.929 24 H 0.099 0.901 25 H 0.207 0.793 26 H 0.119 0.881 27 H 0.116 0.884 28 H 0.110 0.890 29 H 0.107 0.893 30 H 0.114 0.886 31 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -2.497 9.883 2.229 10.435 hybrid contribution -0.724 -0.269 -0.440 0.889 sum -3.220 9.614 1.789 10.296 Atomic orbital electron populations 1.21363 0.82078 1.01392 0.98907 1.47831 1.05204 1.04934 1.79958 1.21589 0.98437 0.87280 0.94906 1.22079 0.83985 0.93065 0.94813 0.88060 1.86648 1.29188 1.63003 1.56735 1.23073 0.99011 1.00406 0.98180 1.22941 0.91209 1.02989 1.03767 1.22825 1.03550 0.99588 0.94794 1.18249 0.86964 0.82333 0.76226 1.90585 1.14022 1.86366 1.55311 1.20981 0.93701 0.89297 1.53955 0.91036 1.25740 0.94613 1.00299 0.92609 1.70013 1.07061 1.27317 1.35348 0.86453 0.79859 0.81105 0.79459 1.19271 1.20570 1.19255 0.95579 0.91181 0.93768 0.92883 0.90110 0.79289 0.88066 0.88374 0.88976 0.89282 0.88598 0.92110 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 2.05 9.89 59.85 0.59 2.64 16 2 N -0.64 -14.91 2.80 -183.25 -0.51 -15.42 16 3 C 0.10 2.00 5.08 -4.04 -0.02 1.98 16 4 C 0.12 2.16 3.43 -26.73 -0.09 2.07 16 5 H 0.10 2.23 7.90 -51.93 -0.41 1.82 16 6 O -0.55 -9.28 11.97 -35.23 -0.42 -9.70 16 7 C -0.19 -2.66 5.36 -90.62 -0.49 -3.15 16 8 C -0.17 -2.36 10.18 -26.69 -0.27 -2.64 16 9 C -0.17 -2.18 10.16 -26.69 -0.27 -2.45 16 10 C 0.56 16.15 7.61 -12.99 -0.10 16.05 16 11 O -0.58 -18.87 14.60 5.20 0.08 -18.79 16 12 C -0.54 -15.58 8.74 -35.63 -0.31 -15.89 16 13 H 0.07 1.88 6.00 -52.49 -0.31 1.57 16 14 C 0.09 2.46 5.50 -17.37 -0.10 2.37 16 15 N -0.77 -23.31 11.83 55.55 0.66 -22.66 16 16 Si 0.91 20.41 29.56 -169.99 -5.02 15.39 16 17 H -0.27 -5.85 7.11 56.52 0.40 -5.44 16 18 H -0.28 -6.16 7.11 56.52 0.40 -5.76 16 19 H -0.27 -5.87 7.11 56.52 0.40 -5.47 16 20 H 0.03 0.46 8.14 -51.93 -0.42 0.04 16 21 H 0.07 1.42 6.10 -51.93 -0.32 1.10 16 22 H 0.04 0.70 6.88 -51.93 -0.36 0.34 16 23 H 0.05 0.85 8.07 -51.93 -0.42 0.43 16 24 H 0.08 1.75 7.42 -51.93 -0.39 1.37 16 25 H 0.36 4.52 8.79 45.56 0.40 4.92 16 26 H 0.10 1.26 8.11 -51.93 -0.42 0.84 16 27 H 0.10 1.49 8.05 -51.93 -0.42 1.08 16 28 H 0.09 1.09 8.14 -51.93 -0.42 0.67 16 29 H 0.09 0.95 8.14 -51.93 -0.42 0.53 16 30 H 0.10 1.31 8.14 -51.93 -0.42 0.89 16 31 H 0.27 7.39 8.29 -40.82 -0.34 7.06 16 LS Contribution 266.20 15.07 4.01 4.01 Total: -1.00 -34.49 266.20 -5.74 -40.22 By element: Atomic # 1 Polarization: 9.44 SS G_CDS: -3.47 Total: 5.97 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -1.05 Total: 0.98 kcal Atomic # 7 Polarization: -38.22 SS G_CDS: 0.14 Total: -38.08 kcal Atomic # 8 Polarization: -28.15 SS G_CDS: -0.35 Total: -28.49 kcal Atomic # 14 Polarization: 20.41 SS G_CDS: -5.02 Total: 15.39 kcal Total LS contribution 4.01 Total: 4.01 kcal Total: -34.49 -5.74 -40.22 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000388595527.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.895 kcal (2) G-P(sol) polarization free energy of solvation -34.488 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.383 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.736 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.224 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.119 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds