Wall clock time and date at job start Thu Apr 9 2020 11:55:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.27572 * 126.41769 * 2 1 4 4 N 1.39141 * 113.16341 * 180.02562 * 3 2 1 5 5 C 1.46509 * 124.44009 * 179.97438 * 4 3 2 6 6 C 1.53003 * 109.47007 * 299.97829 * 5 4 3 7 7 C 1.53000 * 109.46837 * 59.97414 * 5 4 3 8 8 C 1.35306 * 111.16816 * 0.09295 * 4 3 2 9 9 O 1.21294 * 127.68488 * 179.91349 * 8 4 3 10 10 C 1.51433 * 126.41417 * 180.02562 * 2 1 3 11 11 H 1.08997 * 110.61120 * 61.29375 * 10 2 1 12 12 C 1.52996 * 110.60870 * 298.47595 * 10 2 1 13 13 C 1.50702 * 109.47159 * 177.15151 * 12 10 2 14 14 H 1.08002 * 120.00299 * 0.02562 * 13 12 10 15 15 C 1.37884 * 119.99942 * 179.72211 * 13 12 10 16 16 N 1.31514 * 119.99698 * 0.28408 * 15 13 12 17 17 Si 1.86794 * 119.99837 * 180.27476 * 15 13 12 18 18 H 1.48496 * 109.47341 * 0.02562 * 17 15 13 19 19 H 1.48508 * 109.46983 * 120.00379 * 17 15 13 20 20 H 1.48503 * 109.47491 * 240.00192 * 17 15 13 21 21 H 1.09003 * 109.47088 * 269.96078 * 1 2 3 22 22 H 1.09007 * 109.46954 * 29.95086 * 1 2 3 23 23 H 1.08998 * 109.47530 * 149.95628 * 1 2 3 24 24 H 1.08996 * 109.47267 * 179.97438 * 5 4 3 25 25 H 1.08992 * 109.47165 * 179.97438 * 6 5 4 26 26 H 1.08995 * 109.46713 * 299.99941 * 6 5 4 27 27 H 1.09006 * 109.46819 * 59.99483 * 6 5 4 28 28 H 1.09000 * 109.47478 * 60.00253 * 7 5 4 29 29 H 1.09004 * 109.46973 * 180.02562 * 7 5 4 30 30 H 1.09000 * 109.47009 * 300.00435 * 7 5 4 31 31 H 1.09004 * 109.47066 * 57.15354 * 12 10 2 32 32 H 1.08994 * 109.47405 * 297.15184 * 12 10 2 33 33 H 0.97005 * 119.99651 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2644 1.0266 0.0000 4 7 3.6187 0.7076 -0.0006 5 6 4.7022 1.6937 -0.0012 6 6 4.5937 2.5698 -1.2509 7 6 4.5941 2.5710 1.2476 8 6 3.8050 -0.6326 -0.0030 9 8 4.8579 -1.2349 -0.0056 10 6 2.4059 -1.2187 -0.0005 11 1 2.2394 -1.8179 -0.8956 12 6 2.1761 -2.0579 1.2579 13 6 3.0309 -3.2976 1.1979 14 1 3.6740 -3.4696 0.3475 15 6 2.9965 -4.2094 2.2317 16 7 2.2136 -3.9998 3.2674 17 14 4.0617 -5.7422 2.1609 18 1 4.8457 -5.7424 0.8998 19 1 4.9898 -5.7540 3.3202 20 1 3.1969 -6.9486 2.2069 21 1 -0.3633 -0.0007 1.0277 22 1 -0.3633 0.8905 -0.5131 23 1 -0.3634 -0.8895 -0.5145 24 1 5.6626 1.1783 -0.0011 25 1 5.3995 3.3037 -1.2512 26 1 4.6706 1.9448 -2.1405 27 1 3.6332 3.0852 -1.2509 28 1 4.6714 1.9469 2.1379 29 1 5.4000 3.3050 1.2469 30 1 3.6336 3.0864 1.2475 31 1 1.1258 -2.3433 1.3175 32 1 2.4445 -1.4739 2.1381 33 1 2.1891 -4.6415 3.9946 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000601935460.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 11:55:57 Heat of formation + Delta-G solvation = 1.922754 kcal Electronic energy + Delta-G solvation = -15704.139638 eV Core-core repulsion = 13151.850854 eV Total energy + Delta-G solvation = -2552.288784 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 224.127 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -40.66910 -36.72323 -35.62581 -33.20747 -31.30443 -30.33067 -27.59666 -27.10859 -25.84493 -22.62898 -21.37277 -20.05094 -18.54428 -16.54587 -16.16356 -15.40323 -14.72352 -14.38662 -14.20942 -13.76207 -13.25848 -13.13836 -12.94463 -12.30491 -12.19988 -12.13774 -12.08386 -11.53895 -11.45025 -11.33050 -11.03834 -10.86018 -10.76671 -10.54163 -10.15090 -9.49783 -9.32704 -8.73143 -8.35511 -8.04594 -6.01769 -4.02618 2.23426 2.89248 3.29524 3.34385 3.41782 3.49944 4.47000 4.49404 4.78354 5.06317 5.18501 5.33021 5.36199 5.50147 5.64860 5.69179 5.81000 5.86165 5.90267 5.91662 6.00951 6.15969 6.25023 6.32567 6.46982 6.74638 6.97890 7.44352 7.49696 7.97215 8.25659 8.32002 8.60844 9.03373 9.61758 11.09594 Molecular weight = 224.13amu Principal moments of inertia in cm(-1) A = 0.030995 B = 0.008444 C = 0.007362 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 903.141348 B = 3315.049519 C = 3802.644907 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.072 4.072 2 C 0.096 3.904 3 N -0.254 5.254 4 N -0.480 5.480 5 C 0.162 3.838 6 C -0.156 4.156 7 C -0.158 4.158 8 C 0.510 3.490 9 O -0.489 6.489 10 C -0.132 4.132 11 H 0.120 0.880 12 C 0.055 3.945 13 C -0.514 4.514 14 H 0.065 0.935 15 C 0.058 3.942 16 N -0.898 5.898 17 Si 0.895 3.105 18 H -0.271 1.271 19 H -0.285 1.285 20 H -0.284 1.284 21 H 0.087 0.913 22 H 0.074 0.926 23 H 0.084 0.916 24 H 0.097 0.903 25 H 0.065 0.935 26 H 0.054 0.946 27 H 0.065 0.935 28 H 0.058 0.942 29 H 0.064 0.936 30 H 0.065 0.935 31 H 0.037 0.963 32 H 0.019 0.981 33 H 0.260 0.740 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.566 11.515 -6.683 13.406 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.096 4.096 3 N -0.061 5.061 4 N -0.302 5.302 5 C 0.060 3.940 6 C -0.214 4.214 7 C -0.216 4.216 8 C 0.298 3.702 9 O -0.359 6.359 10 C -0.156 4.156 11 H 0.137 0.863 12 C 0.017 3.983 13 C -0.552 4.552 14 H 0.083 0.917 15 C -0.143 4.143 16 N -0.538 5.538 17 Si 0.722 3.278 18 H -0.195 1.195 19 H -0.211 1.211 20 H -0.210 1.210 21 H 0.105 0.895 22 H 0.093 0.907 23 H 0.103 0.897 24 H 0.115 0.885 25 H 0.084 0.916 26 H 0.073 0.927 27 H 0.084 0.916 28 H 0.077 0.923 29 H 0.083 0.917 30 H 0.084 0.916 31 H 0.056 0.944 32 H 0.037 0.963 33 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges -0.748 12.181 -6.528 13.840 hybrid contribution 0.745 -1.621 0.165 1.791 sum -0.003 10.560 -6.363 12.329 Atomic orbital electron populations 1.20263 0.85466 1.03393 1.03907 1.25411 0.97223 0.91884 0.95117 1.74379 0.89202 1.26953 1.15551 1.50023 1.02483 1.06161 1.71532 1.20936 0.88318 0.89004 0.95780 1.22091 1.02627 0.99564 0.97096 1.22099 1.02529 0.99599 0.97362 1.21523 0.91965 0.81941 0.74726 1.90700 1.31440 1.65655 1.48079 1.22063 0.90857 0.96485 1.06191 0.86293 1.18880 0.98528 0.93215 0.87665 1.21251 1.24094 1.04376 1.05481 0.91683 1.24963 0.95595 0.98459 0.95257 1.69967 1.38773 1.36442 1.08598 0.86477 0.80375 0.82663 0.78239 1.19532 1.21071 1.21018 0.89459 0.90692 0.89682 0.88538 0.91627 0.92671 0.91558 0.92293 0.91676 0.91565 0.94437 0.96305 0.93022 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.89 10.49 36.01 0.38 -0.51 16 2 C 0.10 1.65 6.93 -78.73 -0.55 1.11 16 3 N -0.25 -4.50 11.78 35.53 0.42 -4.08 16 4 N -0.48 -9.10 3.25 -53.31 -0.17 -9.28 16 5 C 0.16 2.51 3.61 -67.92 -0.24 2.26 16 6 C -0.16 -1.94 9.41 37.16 0.35 -1.59 16 7 C -0.16 -2.15 9.41 37.16 0.35 -1.80 16 8 C 0.51 11.50 7.61 -10.26 -0.08 11.42 16 9 O -0.49 -12.58 16.58 5.55 0.09 -12.48 16 10 C -0.13 -2.78 2.98 -92.08 -0.27 -3.06 16 11 H 0.12 2.38 8.14 -51.93 -0.42 1.95 16 12 C 0.06 1.40 4.50 -27.88 -0.13 1.27 16 13 C -0.51 -14.73 8.39 -34.44 -0.29 -15.02 16 14 H 0.06 1.91 7.24 -52.49 -0.38 1.53 16 15 C 0.06 1.69 5.46 -17.82 -0.10 1.59 16 16 N -0.90 -26.86 13.29 55.43 0.74 -26.12 16 17 Si 0.89 22.46 29.54 -169.99 -5.02 17.44 16 18 H -0.27 -6.80 7.11 56.52 0.40 -6.40 16 19 H -0.28 -7.13 7.11 56.52 0.40 -6.73 16 20 H -0.28 -6.91 7.11 56.52 0.40 -6.51 16 21 H 0.09 1.06 8.14 -51.93 -0.42 0.64 16 22 H 0.07 0.76 8.14 -51.92 -0.42 0.34 16 23 H 0.08 0.95 8.14 -51.93 -0.42 0.52 16 24 H 0.10 1.55 7.69 -51.93 -0.40 1.15 16 25 H 0.06 0.65 8.14 -51.93 -0.42 0.23 16 26 H 0.05 0.72 8.14 -51.93 -0.42 0.30 16 27 H 0.07 0.83 8.14 -51.93 -0.42 0.41 16 28 H 0.06 0.90 8.14 -51.93 -0.42 0.48 16 29 H 0.06 0.70 8.14 -51.93 -0.42 0.27 16 30 H 0.07 0.90 8.14 -51.93 -0.42 0.48 16 31 H 0.04 0.94 8.14 -51.93 -0.42 0.52 16 32 H 0.02 0.52 8.14 -51.93 -0.42 0.10 16 33 H 0.26 7.35 8.31 -40.82 -0.34 7.01 16 LS Contribution 285.46 15.07 4.30 4.30 Total: -1.00 -33.03 285.46 -5.21 -38.24 By element: Atomic # 1 Polarization: 1.29 SS G_CDS: -4.99 Total: -3.70 kcal Atomic # 6 Polarization: -3.75 SS G_CDS: -0.58 Total: -4.33 kcal Atomic # 7 Polarization: -40.46 SS G_CDS: 0.98 Total: -39.48 kcal Atomic # 8 Polarization: -12.58 SS G_CDS: 0.09 Total: -12.48 kcal Atomic # 14 Polarization: 22.46 SS G_CDS: -5.02 Total: 17.44 kcal Total LS contribution 4.30 Total: 4.30 kcal Total: -33.03 -5.21 -38.24 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000601935460.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 40.166 kcal (2) G-P(sol) polarization free energy of solvation -33.032 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.133 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.211 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.243 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.923 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.18 seconds