Wall clock time and date at job start Thu Apr 9 2020 12:00:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 N 1.46899 * 109.47230 * 2 1 4 4 C 1.47008 * 111.00261 * 293.95533 * 3 2 1 5 5 C 1.53094 * 109.26075 * 177.60681 * 4 3 2 6 6 O 1.43018 * 109.25924 * 56.84793 * 5 4 3 7 7 C 1.43019 * 113.73936 * 301.33239 * 6 5 4 8 8 H 1.08998 * 109.50317 * 298.69180 * 7 6 5 9 9 C 1.50700 * 109.50768 * 178.60181 * 7 6 5 10 10 O 1.21293 * 119.99810 * 355.00017 * 9 7 6 11 11 N 1.34777 * 119.99675 * 175.27889 * 9 7 6 12 12 C 1.37102 * 119.99634 * 179.72687 * 11 9 7 13 13 H 1.08002 * 119.99868 * 359.97438 * 12 11 9 14 14 C 1.38945 * 119.99860 * 179.97438 * 12 11 9 15 15 N 1.31414 * 119.99894 * 0.02562 * 14 12 11 16 16 Si 1.86801 * 119.99956 * 179.97438 * 14 12 11 17 17 H 1.48496 * 109.47031 * 60.00269 * 16 14 12 18 18 H 1.48504 * 109.46971 * 180.02562 * 16 14 12 19 19 H 1.48498 * 109.47038 * 300.00246 * 16 14 12 20 20 C 1.47014 * 110.99802 * 170.31863 * 3 2 1 21 21 H 1.09000 * 109.46746 * 59.99678 * 1 2 3 22 22 H 1.08996 * 109.47504 * 179.97438 * 1 2 3 23 23 H 1.08994 * 109.47018 * 299.99988 * 1 2 3 24 24 H 1.09009 * 109.46651 * 240.00328 * 2 1 3 25 25 H 1.08994 * 109.47175 * 120.00337 * 2 1 3 26 26 H 1.08998 * 109.50874 * 57.67373 * 4 3 2 27 27 H 1.09004 * 109.50972 * 297.54206 * 4 3 2 28 28 H 1.09004 * 109.50644 * 296.91768 * 5 4 3 29 29 H 1.09000 * 109.51407 * 176.78219 * 5 4 3 30 30 H 0.97001 * 120.00485 * 359.71840 * 11 9 7 31 31 H 0.97004 * 119.99542 * 179.97438 * 15 14 12 32 32 H 1.09001 * 109.50539 * 62.46536 * 20 3 2 33 33 H 1.08994 * 109.51054 * 302.32936 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0197 1.3850 0.0000 4 6 1.6700 2.0675 -1.2542 5 6 2.1453 3.5212 -1.1876 6 8 3.5522 3.5463 -0.9317 7 6 3.9283 2.8908 0.2826 8 1 3.4556 3.3912 1.1277 9 6 5.4261 2.9437 0.4400 10 8 6.1129 3.4075 -0.4457 11 7 6.0028 2.4705 1.5625 12 6 7.3659 2.5135 1.7033 13 1 7.9775 2.9262 0.9145 14 6 7.9605 2.0262 2.8607 15 7 7.2163 1.5237 3.8202 16 14 9.8177 2.0842 3.0522 17 1 10.2793 3.4936 2.9780 18 1 10.1980 1.5069 4.3666 19 1 10.4523 1.2975 1.9643 20 6 3.4709 1.4306 0.2308 21 1 -0.3633 0.5139 -0.8900 22 1 -0.3634 -1.0276 -0.0005 23 1 -0.3633 0.5138 0.8899 24 1 1.8933 -0.5138 -0.8901 25 1 1.8933 -0.5139 0.8899 26 1 0.5890 2.0440 -1.3922 27 1 2.1553 1.5638 -2.0903 28 1 1.6202 4.0395 -0.3852 29 1 1.9393 4.0155 -2.1370 30 1 5.4536 2.0997 2.2708 31 1 7.6315 1.1831 4.6280 32 1 3.9850 0.9169 -0.5815 33 1 3.7046 0.9423 1.1768 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000610257709.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 12:00:04 Heat of formation + Delta-G solvation = -77.147044 kcal Electronic energy + Delta-G solvation = -16299.454479 eV Core-core repulsion = 13553.280920 eV Total energy + Delta-G solvation = -2746.173559 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 228.126 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -39.68110 -37.69180 -35.87073 -33.90908 -31.75379 -30.85886 -30.67679 -26.96575 -24.77392 -23.96558 -22.27717 -20.33922 -19.29765 -17.99980 -16.54258 -15.98089 -15.61820 -15.18715 -14.95625 -14.61056 -14.18047 -13.85074 -13.64724 -13.24411 -12.93636 -12.35746 -12.01325 -11.84088 -11.58551 -11.53680 -11.23333 -11.02412 -10.85624 -10.44505 -10.44331 -10.22196 -9.54305 -9.34119 -8.35698 -8.30739 -7.99748 -6.43537 -3.84781 3.19465 3.25885 3.30040 3.67805 3.84116 3.98671 4.26155 4.87588 4.99816 5.03895 5.13817 5.24952 5.28254 5.34181 5.40298 5.51368 5.57349 5.68658 5.79002 5.85943 5.92938 6.00099 6.10120 6.19605 6.23129 6.99311 7.02479 7.45586 7.53706 8.03182 8.58662 9.15197 9.49272 10.01073 10.73897 Molecular weight = 228.13amu Principal moments of inertia in cm(-1) A = 0.038547 B = 0.006591 C = 0.005825 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 726.205400 B = 4247.140873 C = 4805.944239 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.048 3.952 3 N -0.537 5.537 4 C 0.014 3.986 5 C 0.061 3.939 6 O -0.354 6.354 7 C 0.088 3.912 8 H 0.078 0.922 9 C 0.448 3.552 10 O -0.574 6.574 11 N -0.556 5.556 12 C -0.301 4.301 13 H 0.104 0.896 14 C 0.024 3.976 15 N -0.900 5.900 16 Si 0.933 3.067 17 H -0.273 1.273 18 H -0.284 1.284 19 H -0.273 1.273 20 C 0.031 3.969 21 H 0.053 0.947 22 H 0.057 0.943 23 H 0.063 0.937 24 H 0.033 0.967 25 H 0.078 0.922 26 H 0.085 0.915 27 H 0.042 0.958 28 H 0.057 0.943 29 H 0.097 0.903 30 H 0.393 0.607 31 H 0.273 0.727 32 H 0.047 0.953 33 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.838 -2.780 -4.334 13.832 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.079 4.079 3 N -0.262 5.262 4 C -0.114 4.114 5 C -0.017 4.017 6 O -0.272 6.272 7 C 0.026 3.974 8 H 0.095 0.905 9 C 0.232 3.768 10 O -0.458 6.458 11 N -0.193 5.193 12 C -0.430 4.430 13 H 0.122 0.878 14 C -0.178 4.178 15 N -0.541 5.541 16 Si 0.759 3.241 17 H -0.198 1.198 18 H -0.209 1.209 19 H -0.199 1.199 20 C -0.097 4.097 21 H 0.072 0.928 22 H 0.076 0.924 23 H 0.082 0.918 24 H 0.051 0.949 25 H 0.096 0.904 26 H 0.103 0.897 27 H 0.060 0.940 28 H 0.075 0.925 29 H 0.115 0.885 30 H 0.227 0.773 31 H 0.083 0.917 32 H 0.065 0.935 33 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -12.402 -2.214 -4.484 13.372 hybrid contribution 0.681 -0.862 0.124 1.105 sum -11.721 -3.076 -4.360 12.879 Atomic orbital electron populations 1.21789 0.94887 1.01418 1.02373 1.22103 0.95959 0.88730 1.01146 1.62278 1.13777 1.16020 1.34172 1.22855 1.01292 0.96242 0.91012 1.22669 0.82779 0.94689 1.01546 1.88145 1.21737 1.76689 1.40590 1.21914 0.95402 0.91814 0.88226 0.90457 1.19368 0.87475 0.85296 0.84673 1.90543 1.63759 1.49753 1.41705 1.41764 1.07953 1.53755 1.15856 1.19674 0.81721 1.38396 1.03237 0.87842 1.25269 1.00648 0.96660 0.95177 1.69609 1.36291 1.40669 1.07518 0.85889 0.81992 0.78811 0.77370 1.19804 1.20925 1.19866 1.22726 0.86991 0.97277 1.02704 0.92833 0.92365 0.91762 0.94878 0.90373 0.89692 0.94017 0.92504 0.88543 0.77292 0.91718 0.93451 0.88898 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.40 9.84 37.16 0.37 -1.03 16 2 C 0.05 0.58 5.68 -3.82 -0.02 0.55 16 3 N -0.54 -7.67 4.73 -234.31 -1.11 -8.78 16 4 C 0.01 0.18 5.43 -3.72 -0.02 0.16 16 5 C 0.06 0.87 7.01 37.21 0.26 1.13 16 6 O -0.35 -7.08 10.01 -55.06 -0.55 -7.63 16 7 C 0.09 1.77 3.22 -27.83 -0.09 1.68 16 8 H 0.08 1.44 8.14 -51.93 -0.42 1.02 16 9 C 0.45 11.27 7.13 -10.98 -0.08 11.19 16 10 O -0.57 -16.86 16.09 -14.28 -0.23 -17.09 16 11 N -0.56 -14.35 5.25 -10.96 -0.06 -14.41 16 12 C -0.30 -8.47 9.68 -14.93 -0.14 -8.61 16 13 H 0.10 3.05 7.16 -52.49 -0.38 2.67 16 14 C 0.02 0.65 5.50 -17.47 -0.10 0.56 16 15 N -0.90 -24.33 13.05 55.50 0.72 -23.61 16 16 Si 0.93 21.03 29.55 -169.99 -5.02 16.01 16 17 H -0.27 -6.12 7.11 56.52 0.40 -5.72 16 18 H -0.28 -6.22 7.11 56.52 0.40 -5.82 16 19 H -0.27 -6.13 7.11 56.52 0.40 -5.72 16 20 C 0.03 0.54 4.88 -3.71 -0.02 0.52 16 21 H 0.05 0.48 6.51 -51.93 -0.34 0.14 16 22 H 0.06 0.47 8.14 -51.93 -0.42 0.05 16 23 H 0.06 0.63 8.14 -51.93 -0.42 0.21 16 24 H 0.03 0.39 8.12 -51.92 -0.42 -0.03 16 25 H 0.08 0.92 8.04 -51.93 -0.42 0.50 16 26 H 0.08 0.89 6.37 -51.93 -0.33 0.55 16 27 H 0.04 0.57 8.14 -51.93 -0.42 0.15 16 28 H 0.06 0.75 8.14 -51.93 -0.42 0.33 16 29 H 0.10 1.14 8.14 -51.93 -0.42 0.72 16 30 H 0.39 9.61 7.77 -40.82 -0.32 9.29 16 31 H 0.27 6.98 8.31 -40.82 -0.34 6.65 16 32 H 0.05 0.88 8.14 -51.93 -0.42 0.46 16 33 H 0.09 1.57 7.96 -51.93 -0.41 1.15 16 LS Contribution 275.60 15.07 4.15 4.15 Total: -1.00 -31.97 275.60 -6.64 -38.61 By element: Atomic # 1 Polarization: 11.30 SS G_CDS: -4.71 Total: 6.60 kcal Atomic # 6 Polarization: 6.00 SS G_CDS: 0.16 Total: 6.16 kcal Atomic # 7 Polarization: -46.36 SS G_CDS: -0.44 Total: -46.80 kcal Atomic # 8 Polarization: -23.94 SS G_CDS: -0.78 Total: -24.72 kcal Atomic # 14 Polarization: 21.03 SS G_CDS: -5.02 Total: 16.01 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -31.97 -6.64 -38.61 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000610257709.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.539 kcal (2) G-P(sol) polarization free energy of solvation -31.966 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.504 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.643 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.608 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.147 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds