Wall clock time and date at job start Thu Apr 9 2020 12:00:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42901 * 114.00267 * 2 1 4 4 H 1.09001 * 110.28646 * 330.70139 * 3 2 1 5 5 C 1.54256 * 110.32153 * 92.82980 * 3 2 1 6 6 C 1.54382 * 105.06092 * 118.89858 * 5 3 2 7 7 N 1.48562 * 104.59312 * 23.84852 * 6 5 3 8 8 C 1.46894 * 111.00111 * 200.95898 * 7 6 5 9 9 C 1.50697 * 109.47252 * 290.13012 * 8 7 6 10 10 O 1.21294 * 120.00185 * 359.97438 * 9 8 7 11 11 N 1.34784 * 119.99876 * 179.97438 * 9 8 7 12 12 C 1.37095 * 119.99697 * 179.97438 * 11 9 8 13 13 H 1.08004 * 120.00269 * 0.02562 * 12 11 9 14 14 C 1.38948 * 119.99922 * 179.97438 * 12 11 9 15 15 N 1.31414 * 119.99889 * 0.02562 * 14 12 11 16 16 Si 1.86805 * 120.00173 * 180.02562 * 14 12 11 17 17 H 1.48498 * 109.46892 * 0.02562 * 16 14 12 18 18 H 1.48497 * 109.47101 * 120.00400 * 16 14 12 19 19 H 1.48500 * 109.47137 * 240.00276 * 16 14 12 20 20 C 1.48726 * 104.28960 * 320.57576 * 7 6 5 21 21 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 22 22 H 1.09001 * 109.46938 * 59.99878 * 1 2 3 23 23 H 1.09004 * 109.46926 * 299.99999 * 1 2 3 24 24 H 1.09001 * 110.32208 * 237.78867 * 5 3 2 25 25 H 1.08997 * 110.32857 * 359.89662 * 5 3 2 26 26 H 1.08993 * 110.41167 * 142.62867 * 6 5 3 27 27 H 1.09001 * 110.41080 * 265.07288 * 6 5 3 28 28 H 1.09003 * 109.47076 * 50.12909 * 8 7 6 29 29 H 1.08996 * 109.47586 * 170.12704 * 8 7 6 30 30 H 0.96996 * 119.99983 * 0.02562 * 11 9 8 31 31 H 0.96999 * 119.99676 * 180.02562 * 15 14 12 32 32 H 1.08995 * 110.38740 * 280.63950 * 20 7 6 33 33 H 1.08994 * 110.50667 * 158.14703 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3495 2.0134 -0.5003 5 6 2.2935 1.7658 1.4448 6 6 3.8215 1.9774 1.5062 7 7 4.2221 2.2245 0.0971 8 6 5.6531 1.9568 -0.0981 9 6 6.4628 3.0131 0.6088 10 8 5.9028 3.9019 1.2151 11 7 7.8093 2.9701 0.5672 12 6 8.5459 3.9314 1.2099 13 1 8.0472 4.7228 1.7498 14 6 9.9340 3.8869 1.1675 15 7 10.5408 2.9237 0.5110 16 14 10.9377 5.1963 2.0437 17 1 10.0229 6.1612 2.7049 18 1 11.8030 4.5550 3.0661 19 1 11.7851 5.9131 1.0572 20 6 3.3898 1.2781 -0.6925 21 1 -0.3634 -1.0277 -0.0005 22 1 -0.3633 0.5139 -0.8900 23 1 -0.3633 0.5139 0.8900 24 1 1.7732 2.7007 1.6531 25 1 1.9874 0.9968 2.1541 26 1 4.0610 2.8410 2.1265 27 1 4.3139 1.0840 1.8903 28 1 5.8985 0.9766 0.3110 29 1 5.8842 1.9741 -1.1631 30 1 8.2572 2.2596 0.0820 31 1 11.5098 2.8924 0.4817 32 1 3.8149 0.2752 -0.6536 33 1 3.3035 1.6155 -1.7253 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000610605511.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 12:00:11 Heat of formation + Delta-G solvation = -72.782431 kcal Electronic energy + Delta-G solvation = -15863.147122 eV Core-core repulsion = 13117.162827 eV Total energy + Delta-G solvation = -2745.984295 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 228.126 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -39.40685 -38.01511 -36.39829 -33.85377 -31.49084 -30.96188 -28.68508 -26.88177 -26.00403 -24.15215 -21.16378 -20.75206 -19.13090 -17.84743 -16.92902 -16.02305 -15.87755 -15.13705 -14.68150 -14.49323 -14.19272 -14.03526 -13.54481 -13.23932 -12.62116 -12.18984 -11.87206 -11.73933 -11.68064 -11.45679 -11.16556 -11.08310 -10.88535 -10.48075 -10.32053 -10.19590 -9.67079 -9.46718 -8.47765 -8.00099 -7.91156 -6.38700 -3.79375 3.18462 3.28697 3.35913 3.53765 3.94560 4.16901 4.41085 4.68882 4.74643 5.05923 5.13637 5.21046 5.25003 5.28308 5.43510 5.45840 5.67781 5.72086 5.84910 5.86318 5.92388 6.03163 6.16942 6.31285 6.47612 6.97494 7.23383 7.25950 7.58286 8.09649 8.65383 9.21449 9.58033 10.10071 10.79294 Molecular weight = 228.13amu Principal moments of inertia in cm(-1) A = 0.080480 B = 0.004834 C = 0.004670 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 347.829318 B = 5791.248831 C = 5993.946006 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.386 6.386 3 C 0.084 3.916 4 H 0.072 0.928 5 C -0.146 4.146 6 C 0.040 3.960 7 N -0.484 5.484 8 C 0.035 3.965 9 C 0.446 3.554 10 O -0.578 6.578 11 N -0.566 5.566 12 C -0.297 4.297 13 H 0.103 0.897 14 C 0.021 3.979 15 N -0.903 5.903 16 Si 0.929 3.071 17 H -0.268 1.268 18 H -0.282 1.282 19 H -0.282 1.282 20 C 0.033 3.967 21 H 0.083 0.917 22 H 0.041 0.959 23 H 0.040 0.960 24 H 0.074 0.926 25 H 0.074 0.926 26 H 0.100 0.900 27 H 0.039 0.961 28 H 0.051 0.949 29 H 0.090 0.910 30 H 0.392 0.608 31 H 0.270 0.730 32 H 0.055 0.945 33 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.404 -6.193 -2.013 15.807 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.304 6.304 3 C 0.025 3.975 4 H 0.090 0.910 5 C -0.184 4.184 6 C -0.088 4.088 7 N -0.209 5.209 8 C -0.097 4.097 9 C 0.231 3.769 10 O -0.462 6.462 11 N -0.203 5.203 12 C -0.427 4.427 13 H 0.121 0.879 14 C -0.180 4.180 15 N -0.544 5.544 16 Si 0.756 3.244 17 H -0.192 1.192 18 H -0.208 1.208 19 H -0.208 1.208 20 C -0.095 4.095 21 H 0.101 0.899 22 H 0.059 0.941 23 H 0.059 0.941 24 H 0.093 0.907 25 H 0.093 0.907 26 H 0.118 0.882 27 H 0.058 0.942 28 H 0.069 0.931 29 H 0.108 0.892 30 H 0.225 0.775 31 H 0.080 0.920 32 H 0.073 0.927 33 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -14.543 -5.230 -1.785 15.558 hybrid contribution 0.900 -0.521 0.284 1.078 sum -13.643 -5.752 -1.501 14.882 Atomic orbital electron populations 1.22755 0.81304 1.02455 0.99958 1.87919 1.19499 1.28022 1.95001 1.22886 0.94746 0.83958 0.95870 0.90995 1.22860 0.97324 1.01552 0.96699 1.23113 0.93282 1.01347 0.91063 1.65178 1.03023 1.46638 1.06059 1.22058 0.88515 0.97490 1.01620 1.19692 0.82906 0.88225 0.86035 1.90499 1.70600 1.38080 1.46993 1.41863 1.04175 1.26850 1.47396 1.19750 0.88210 1.06149 1.28571 0.87876 1.25256 0.96964 0.98079 0.97707 1.69626 1.10110 1.32428 1.42263 0.85805 0.79417 0.80299 0.78852 1.19233 1.20807 1.20765 1.23176 0.92089 0.95970 0.98311 0.89867 0.94077 0.94087 0.90696 0.90694 0.88158 0.94232 0.93078 0.89171 0.77491 0.91968 0.92720 0.89546 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.28 10.86 101.05 1.10 1.38 16 2 O -0.39 -4.84 10.31 -35.23 -0.36 -5.20 16 3 C 0.08 1.07 3.53 -25.35 -0.09 0.98 16 4 H 0.07 0.83 7.83 -51.93 -0.41 0.43 16 5 C -0.15 -1.97 6.81 -25.35 -0.17 -2.14 16 6 C 0.04 0.67 5.80 -2.18 -0.01 0.66 16 7 N -0.48 -8.56 5.06 -231.28 -1.17 -9.73 16 8 C 0.03 0.65 5.30 -4.98 -0.03 0.63 16 9 C 0.45 10.80 7.58 -10.98 -0.08 10.72 16 10 O -0.58 -15.88 14.42 5.55 0.08 -15.80 16 11 N -0.57 -14.61 5.29 -10.96 -0.06 -14.67 16 12 C -0.30 -8.39 9.68 -14.93 -0.14 -8.54 16 13 H 0.10 3.05 7.16 -52.48 -0.38 2.68 16 14 C 0.02 0.58 5.50 -17.47 -0.10 0.48 16 15 N -0.90 -24.85 13.05 55.50 0.72 -24.13 16 16 Si 0.93 21.25 29.55 -169.99 -5.02 16.22 16 17 H -0.27 -6.13 7.11 56.52 0.40 -5.73 16 18 H -0.28 -6.34 7.11 56.52 0.40 -5.94 16 19 H -0.28 -6.34 7.11 56.52 0.40 -5.94 16 20 C 0.03 0.46 6.25 -2.09 -0.01 0.45 16 21 H 0.08 0.60 8.14 -51.93 -0.42 0.18 16 22 H 0.04 0.32 8.10 -51.93 -0.42 -0.11 16 23 H 0.04 0.33 8.14 -51.93 -0.42 -0.09 16 24 H 0.07 0.95 8.14 -51.93 -0.42 0.53 16 25 H 0.07 0.94 7.98 -51.93 -0.41 0.52 16 26 H 0.10 1.96 6.91 -51.93 -0.36 1.61 16 27 H 0.04 0.66 7.82 -51.93 -0.41 0.26 16 28 H 0.05 0.88 7.88 -51.93 -0.41 0.47 16 29 H 0.09 1.52 8.13 -51.93 -0.42 1.10 16 30 H 0.39 9.68 7.90 -40.82 -0.32 9.36 16 31 H 0.27 7.02 8.31 -40.82 -0.34 6.68 16 32 H 0.05 0.77 7.94 -51.93 -0.41 0.36 16 33 H 0.09 1.11 8.14 -51.93 -0.42 0.69 16 LS Contribution 278.82 15.07 4.20 4.20 Total: -1.00 -31.51 278.82 -5.92 -37.44 By element: Atomic # 1 Polarization: 11.82 SS G_CDS: -4.77 Total: 7.05 kcal Atomic # 6 Polarization: 4.16 SS G_CDS: 0.46 Total: 4.62 kcal Atomic # 7 Polarization: -48.02 SS G_CDS: -0.50 Total: -48.53 kcal Atomic # 8 Polarization: -20.72 SS G_CDS: -0.28 Total: -21.01 kcal Atomic # 14 Polarization: 21.25 SS G_CDS: -5.02 Total: 16.22 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -31.51 -5.92 -37.44 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000610605511.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.344 kcal (2) G-P(sol) polarization free energy of solvation -31.515 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.859 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.924 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.438 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.782 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds