Wall clock time and date at job start Thu Apr 9 2020 12:00:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 N 1.46293 * 114.00161 * 2 1 4 4 C 1.46959 * 111.00199 * 119.99608 * 3 2 1 5 5 C 1.53052 * 109.36710 * 183.18532 * 4 3 2 6 6 N 1.46954 * 109.36764 * 301.60376 * 5 4 3 7 7 C 1.46895 * 111.00205 * 183.18458 * 6 5 4 8 8 H 1.08994 * 109.47149 * 188.53016 * 7 6 5 9 9 C 1.53002 * 109.47182 * 308.52976 * 7 6 5 10 10 C 1.53000 * 109.46821 * 68.52812 * 7 6 5 11 11 C 1.50703 * 109.46926 * 63.72051 * 10 7 6 12 12 H 1.08000 * 119.99980 * 5.06987 * 11 10 7 13 13 C 1.37877 * 119.99905 * 185.07549 * 11 10 7 14 14 N 1.31515 * 119.99850 * 359.97438 * 13 11 10 15 15 Si 1.86794 * 120.00192 * 179.97438 * 13 11 10 16 16 H 1.48497 * 109.47273 * 89.99602 * 15 13 11 17 17 H 1.48497 * 109.47153 * 209.99854 * 15 13 11 18 18 H 1.48505 * 109.46849 * 329.99569 * 15 13 11 19 19 C 1.46964 * 110.87932 * 59.31737 * 6 5 4 20 20 C 1.46954 * 111.00083 * 243.79904 * 3 2 1 21 21 H 1.09003 * 109.46903 * 60.00233 * 1 2 3 22 22 H 1.09002 * 109.47326 * 180.02562 * 1 2 3 23 23 H 1.09000 * 109.47186 * 300.00258 * 1 2 3 24 24 H 1.09006 * 109.48417 * 63.22506 * 4 3 2 25 25 H 1.09000 * 109.48958 * 303.15884 * 4 3 2 26 26 H 1.08996 * 109.48765 * 181.63400 * 5 4 3 27 27 H 1.09007 * 109.48313 * 61.57103 * 5 4 3 28 28 H 1.08999 * 109.47038 * 179.97438 * 9 7 6 29 29 H 1.08998 * 109.46826 * 59.99526 * 9 7 6 30 30 H 1.08999 * 109.47278 * 300.00030 * 9 7 6 31 31 H 1.09001 * 109.46569 * 183.71341 * 10 7 6 32 32 H 1.08998 * 109.47480 * 303.71671 * 10 7 6 33 33 H 0.97004 * 120.00305 * 180.02562 * 14 13 11 34 34 H 1.08997 * 109.48663 * 60.64608 * 19 6 5 35 35 H 1.09000 * 109.48739 * 180.71217 * 19 6 5 36 36 H 1.08997 * 109.49018 * 296.77788 * 20 3 2 37 37 H 1.09004 * 109.48966 * 56.82503 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 7 2.0241 1.3364 0.0000 4 6 2.8649 1.5386 1.1882 5 6 3.4033 2.9713 1.1912 6 7 4.1709 3.2060 -0.0398 7 6 4.7684 4.5480 -0.0398 8 1 5.2011 4.7530 -1.0189 9 6 3.6884 5.5871 0.2682 10 6 5.8632 4.6187 1.0267 11 6 6.9708 3.6596 0.6739 12 1 6.9406 3.1202 -0.2612 13 6 8.0226 3.4706 1.5452 14 7 8.0595 4.1278 2.6837 15 14 9.3951 2.2813 1.1084 16 1 10.4610 3.0050 0.3701 17 1 9.9613 1.7005 2.3523 18 1 8.8539 1.1926 0.2555 19 6 3.3300 3.0039 -1.2280 20 6 2.7917 1.5712 -1.2310 21 1 -0.3633 0.5138 -0.8900 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3633 0.5139 0.8900 24 1 3.6988 0.8369 1.1672 25 1 2.2710 1.3714 2.0867 26 1 4.0506 3.1147 2.0563 27 1 2.5703 3.6726 1.2396 28 1 4.1319 6.5828 0.2686 29 1 3.2557 5.3820 1.2473 30 1 2.9085 5.5367 -0.4916 31 1 6.2612 5.6325 1.0719 32 1 5.4441 4.3492 1.9961 33 1 8.7996 3.9952 3.2966 34 1 2.4962 3.7056 -1.2070 35 1 3.9239 3.1711 -2.1265 36 1 3.6246 0.8698 -1.2794 37 1 2.1444 1.4274 -2.0962 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000846970173.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 12:00:15 Heat of formation + Delta-G solvation = 8.571263 kcal Electronic energy + Delta-G solvation = -16827.074088 eV Core-core repulsion = 14220.450649 eV Total energy + Delta-G solvation = -2606.623440 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 228.158 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -39.00047 -36.63425 -34.24800 -32.43111 -30.72577 -29.88708 -27.31199 -26.42515 -24.37687 -23.36790 -22.81732 -20.09006 -18.65165 -17.05731 -16.17300 -15.42373 -15.16147 -14.93702 -14.57007 -14.20196 -13.94653 -13.66558 -13.25790 -12.92487 -12.37037 -12.00382 -11.85867 -11.70769 -11.47654 -11.22308 -11.04423 -10.77578 -10.54533 -10.49603 -10.29605 -9.98585 -9.83346 -9.19443 -8.98022 -8.56367 -8.25975 -7.51812 -5.88786 -3.86379 2.71471 3.39158 3.45542 3.50762 4.46125 4.57147 4.86241 5.33877 5.41017 5.45526 5.48061 5.50092 5.56889 5.59641 5.69331 5.73919 5.77200 5.90691 5.94686 5.97755 6.08384 6.17148 6.31077 6.39115 6.52687 6.64467 6.91679 6.97229 7.13372 7.49830 7.63065 7.86090 7.98416 8.11756 8.57219 9.18733 9.75207 11.23154 Molecular weight = 228.16amu Principal moments of inertia in cm(-1) A = 0.028796 B = 0.007399 C = 0.006589 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 972.123265 B = 3783.297880 C = 4248.222957 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.045 3.955 2 O -0.273 6.273 3 N -0.362 5.362 4 C 0.045 3.955 5 C 0.063 3.937 6 N -0.513 5.513 7 C 0.087 3.913 8 H 0.070 0.930 9 C -0.184 4.184 10 C 0.030 3.970 11 C -0.489 4.489 12 H 0.058 0.942 13 C 0.051 3.949 14 N -0.904 5.904 15 Si 0.888 3.112 16 H -0.284 1.284 17 H -0.290 1.290 18 H -0.275 1.275 19 C 0.058 3.942 20 C 0.044 3.956 21 H 0.040 0.960 22 H 0.083 0.917 23 H 0.041 0.959 24 H 0.057 0.943 25 H 0.079 0.921 26 H 0.100 0.900 27 H 0.037 0.963 28 H 0.056 0.944 29 H 0.054 0.946 30 H 0.040 0.960 31 H 0.016 0.984 32 H 0.022 0.978 33 H 0.257 0.743 34 H 0.036 0.964 35 H 0.082 0.918 36 H 0.054 0.946 37 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.359 -3.195 -5.339 14.737 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.052 4.052 2 O -0.276 6.276 3 N -0.133 5.133 4 C -0.084 4.084 5 C -0.066 4.066 6 N -0.237 5.237 7 C -0.020 4.020 8 H 0.088 0.912 9 C -0.243 4.243 10 C -0.007 4.007 11 C -0.527 4.527 12 H 0.077 0.923 13 C -0.148 4.148 14 N -0.545 5.545 15 Si 0.717 3.283 16 H -0.210 1.210 17 H -0.216 1.216 18 H -0.200 1.200 19 C -0.071 4.071 20 C -0.084 4.084 21 H 0.059 0.941 22 H 0.101 0.899 23 H 0.060 0.940 24 H 0.075 0.925 25 H 0.098 0.902 26 H 0.118 0.882 27 H 0.055 0.945 28 H 0.075 0.925 29 H 0.073 0.927 30 H 0.059 0.941 31 H 0.034 0.966 32 H 0.041 0.959 33 H 0.067 0.933 34 H 0.054 0.946 35 H 0.101 0.899 36 H 0.073 0.927 37 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -13.151 -3.405 -5.187 14.542 hybrid contribution 0.634 -0.550 -0.144 0.852 sum -12.517 -3.955 -5.331 14.169 Atomic orbital electron populations 1.22529 0.81327 1.01137 1.00252 1.90679 1.20234 1.19826 1.96859 1.67852 1.34641 1.06874 1.03919 1.22520 0.95581 0.98201 0.92064 1.22180 0.96037 0.93039 0.95334 1.62321 1.31272 1.29754 1.00329 1.21913 0.94443 0.83833 1.01858 0.91198 1.22521 0.99875 1.00972 1.00914 1.19196 0.91779 0.96868 0.92883 1.21134 1.04380 1.23169 1.04045 0.92331 1.24985 0.98322 0.96296 0.95213 1.69958 1.31934 1.42787 1.09804 0.86647 0.82457 0.81574 0.77621 1.21000 1.21558 1.19973 1.22155 0.95566 0.93841 0.95531 1.22470 0.96523 0.97629 0.91792 0.94150 0.89908 0.94003 0.92500 0.90239 0.88239 0.94477 0.92469 0.92678 0.94090 0.96573 0.95941 0.93322 0.94597 0.89948 0.92716 0.90439 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.51 11.51 101.05 1.16 1.67 16 2 O -0.27 -4.22 10.96 -13.92 -0.15 -4.37 16 3 N -0.36 -5.75 5.05 -113.63 -0.57 -6.32 16 4 C 0.04 0.74 6.16 -3.76 -0.02 0.72 16 5 C 0.06 1.11 4.70 -3.77 -0.02 1.10 16 6 N -0.51 -9.70 4.32 -226.49 -0.98 -10.68 16 7 C 0.09 1.74 2.26 -67.71 -0.15 1.58 16 8 H 0.07 1.40 7.98 -51.93 -0.41 0.99 16 9 C -0.18 -3.09 8.39 37.16 0.31 -2.78 16 10 C 0.03 0.74 4.40 -27.88 -0.12 0.62 16 11 C -0.49 -13.58 8.80 -34.44 -0.30 -13.88 16 12 H 0.06 1.63 7.75 -52.49 -0.41 1.23 16 13 C 0.05 1.47 5.46 -17.82 -0.10 1.37 16 14 N -0.90 -27.09 13.29 55.43 0.74 -26.35 16 15 Si 0.89 22.11 29.54 -169.99 -5.02 17.09 16 16 H -0.28 -6.96 7.11 56.52 0.40 -6.56 16 17 H -0.29 -7.18 7.11 56.52 0.40 -6.78 16 18 H -0.27 -6.79 7.11 56.52 0.40 -6.39 16 19 C 0.06 0.91 5.36 -3.76 -0.02 0.89 16 20 C 0.04 0.68 6.16 -3.77 -0.02 0.66 16 21 H 0.04 0.42 8.14 -51.93 -0.42 0.00 16 22 H 0.08 0.74 8.14 -51.93 -0.42 0.32 16 23 H 0.04 0.45 8.14 -51.93 -0.42 0.03 16 24 H 0.06 1.05 8.14 -51.93 -0.42 0.63 16 25 H 0.08 1.19 8.14 -51.93 -0.42 0.77 16 26 H 0.10 1.97 6.37 -51.93 -0.33 1.64 16 27 H 0.04 0.62 6.41 -51.92 -0.33 0.29 16 28 H 0.06 0.93 8.14 -51.93 -0.42 0.51 16 29 H 0.05 0.92 6.39 -51.93 -0.33 0.59 16 30 H 0.04 0.61 6.85 -51.93 -0.36 0.26 16 31 H 0.02 0.43 8.14 -51.93 -0.42 0.00 16 32 H 0.02 0.59 6.42 -51.93 -0.33 0.26 16 33 H 0.26 7.36 8.31 -40.82 -0.34 7.02 16 34 H 0.04 0.54 6.85 -51.93 -0.36 0.18 16 35 H 0.08 1.22 8.05 -51.93 -0.42 0.81 16 36 H 0.05 0.92 8.14 -51.93 -0.42 0.50 16 37 H 0.08 1.02 8.14 -51.93 -0.42 0.60 16 LS Contribution 292.32 15.07 4.41 4.41 Total: -1.00 -30.30 292.32 -7.09 -37.39 By element: Atomic # 1 Polarization: 3.11 SS G_CDS: -6.22 Total: -3.11 kcal Atomic # 6 Polarization: -8.76 SS G_CDS: 0.71 Total: -8.05 kcal Atomic # 7 Polarization: -42.53 SS G_CDS: -0.82 Total: -43.35 kcal Atomic # 8 Polarization: -4.22 SS G_CDS: -0.15 Total: -4.37 kcal Atomic # 14 Polarization: 22.11 SS G_CDS: -5.02 Total: 17.09 kcal Total LS contribution 4.41 Total: 4.41 kcal Total: -30.30 -7.09 -37.39 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000846970173.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.957 kcal (2) G-P(sol) polarization free energy of solvation -30.297 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.660 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.089 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.386 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.571 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds