Wall clock time and date at job start Thu Apr 9 2020 12:05:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17404 * 1 3 3 C 1.47198 * 179.97438 * 2 1 4 4 N 1.46500 * 109.47366 * 326.41573 * 3 2 1 5 5 C 1.36805 * 120.00412 * 261.44865 * 4 3 2 6 6 H 1.08005 * 120.00159 * 198.44377 * 5 4 3 7 7 C 1.39077 * 120.00249 * 18.44141 * 5 4 3 8 8 N 1.31347 * 119.99457 * 19.75053 * 7 5 4 9 9 Si 1.86802 * 120.00248 * 199.75764 * 7 5 4 10 10 H 1.48498 * 109.47092 * 89.99982 * 9 7 5 11 11 H 1.48498 * 109.46691 * 209.99801 * 9 7 5 12 12 H 1.48496 * 109.46844 * 329.99552 * 9 7 5 13 13 C 1.34782 * 119.99807 * 81.16685 * 4 3 2 14 14 O 1.21651 * 120.00071 * 183.91190 * 13 4 3 15 15 C 1.47148 * 119.99817 * 3.91669 * 13 4 3 16 16 F 1.35094 * 119.99803 * 353.75411 * 15 13 4 17 17 C 1.33257 * 119.99914 * 173.76079 * 15 13 4 18 18 C 1.51398 * 136.31522 * 359.62613 * 17 15 13 19 19 C 1.53381 * 87.51810 * 206.05821 * 18 17 15 20 20 C 1.51405 * 136.31467 * 179.97438 * 17 15 13 21 21 H 4.40645 * 5.51396 * 180.02562 * 4 1 2 22 22 H 1.09003 * 109.47018 * 206.41975 * 3 2 1 23 23 H 1.09003 * 109.47576 * 86.41846 * 3 2 1 24 24 H 0.97008 * 120.00002 * 180.02562 * 8 7 5 25 25 H 1.09004 * 113.56213 * 320.64111 * 18 17 15 26 26 H 1.09005 * 113.56521 * 91.37493 * 18 17 15 27 27 H 1.09003 * 113.96629 * 220.29488 * 19 18 17 28 28 H 1.08997 * 113.59520 * 88.79736 * 19 18 17 29 29 H 1.09001 * 113.56034 * 268.62199 * 20 17 15 30 30 H 1.08994 * 113.55902 * 39.35753 * 20 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1349 -1.1498 0.7640 5 6 3.5290 -0.9899 2.0643 6 1 4.1548 -1.7342 2.5343 7 6 3.1239 0.1310 2.7810 8 7 2.0831 0.8253 2.3810 9 14 4.0600 0.6493 4.3121 10 1 5.1450 1.5901 3.9342 11 1 3.1309 1.3192 5.2572 12 1 4.6481 -0.5493 4.9621 13 6 3.1911 -2.3668 0.1876 14 8 3.5293 -3.3348 0.8422 15 6 2.8436 -2.5246 -1.2335 16 9 2.3480 -1.4771 -1.9279 17 6 3.0175 -3.7007 -1.8354 18 6 3.5308 -5.0685 -1.4382 19 6 3.9032 -5.2828 -2.9106 20 6 2.7960 -4.2637 -3.2232 21 1 -1.0498 -0.0004 0.0000 22 1 3.0089 0.9212 0.4573 23 1 3.0095 -0.0634 -1.0257 24 1 1.8007 1.6074 2.8806 25 1 4.3935 -5.0339 -0.7728 26 1 2.7496 -5.7412 -1.0840 27 1 3.6937 -6.2872 -3.2786 28 1 4.9054 -4.9357 -3.1621 29 1 1.8134 -4.7157 -3.3583 30 1 3.0560 -3.5690 -4.0218 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491783607.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 12:05:04 Heat of formation + Delta-G solvation = 40.514643 kcal Electronic energy + Delta-G solvation = -16771.518389 eV Core-core repulsion = 13871.497967 eV Total energy + Delta-G solvation = -2900.020421 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 237.091 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -48.37984 -38.75428 -37.88202 -35.16809 -32.16497 -31.23887 -29.51106 -26.58101 -25.45068 -25.03437 -22.61517 -20.29045 -18.08618 -17.69837 -17.05380 -16.34177 -15.62213 -15.43805 -15.06085 -14.69367 -14.21937 -13.72754 -13.58569 -12.80781 -12.36183 -12.17817 -11.88770 -11.74040 -11.56934 -11.35586 -11.03686 -10.76161 -10.55548 -10.41211 -10.10424 -9.36026 -9.34607 -8.88428 -8.49561 -8.30433 -7.91337 -6.45742 -3.94752 1.85799 3.12892 3.19858 3.24537 3.72129 4.02797 4.11551 4.19889 4.50581 4.65972 4.92370 4.99806 5.03868 5.33384 5.46164 5.58761 5.74204 5.88027 5.94033 5.99464 6.34695 6.42347 6.49601 6.68712 6.78404 6.98043 7.07056 7.43351 7.96357 8.32172 8.85141 8.99557 9.21022 9.77031 10.53618 Molecular weight = 237.09amu Principal moments of inertia in cm(-1) A = 0.032476 B = 0.008251 C = 0.006931 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 861.968007 B = 3392.534239 C = 4039.071096 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.263 4.263 2 C -0.107 4.107 3 C 0.208 3.792 4 N -0.417 5.417 5 C -0.311 4.311 6 H 0.109 0.891 7 C 0.032 3.968 8 N -0.850 5.850 9 Si 0.929 3.071 10 H -0.275 1.275 11 H -0.283 1.283 12 H -0.267 1.267 13 C 0.463 3.537 14 O -0.569 6.569 15 C 0.057 3.943 16 F -0.136 7.136 17 C -0.173 4.173 18 C -0.071 4.071 19 C -0.141 4.141 20 C -0.092 4.092 21 H 0.200 0.800 22 H 0.111 0.889 23 H 0.086 0.914 24 H 0.272 0.728 25 H 0.083 0.917 26 H 0.090 0.910 27 H 0.072 0.928 28 H 0.082 0.918 29 H 0.092 0.908 30 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.983 -3.506 -8.458 9.208 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.282 4.282 2 C -0.109 4.109 3 C 0.085 3.915 4 N -0.132 5.132 5 C -0.439 4.439 6 H 0.127 0.873 7 C -0.174 4.174 8 N -0.487 5.487 9 Si 0.754 3.246 10 H -0.201 1.201 11 H -0.209 1.209 12 H -0.191 1.191 13 C 0.252 3.748 14 O -0.455 6.455 15 C 0.035 3.965 16 F -0.115 7.115 17 C -0.177 4.177 18 C -0.108 4.108 19 C -0.178 4.178 20 C -0.129 4.129 21 H 0.217 0.783 22 H 0.128 0.872 23 H 0.104 0.896 24 H 0.083 0.917 25 H 0.102 0.898 26 H 0.109 0.891 27 H 0.091 0.909 28 H 0.100 0.900 29 H 0.110 0.890 30 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 1.056 -3.717 -8.045 8.925 hybrid contribution -0.250 0.798 0.685 1.081 sum 0.806 -2.919 -7.361 7.959 Atomic orbital electron populations 1.24245 0.95358 1.02857 1.05746 1.23055 0.94221 0.97985 0.95597 1.18843 0.84677 0.92355 0.95590 1.43709 1.52618 1.05040 1.11823 1.19799 1.28735 1.07860 0.87499 0.87337 1.25448 0.95253 0.97199 0.99523 1.70089 1.20382 1.17980 1.40226 0.85888 0.79160 0.79075 0.80432 1.20068 1.20864 1.19148 1.17739 0.87318 0.84061 0.85649 1.90637 1.54133 1.37719 1.63023 1.19157 1.02543 0.83993 0.90839 1.91361 1.85314 1.55526 1.79302 1.23063 1.01665 0.94785 0.98204 1.21768 1.01292 0.91734 0.96016 1.22723 0.98700 0.98910 0.97460 1.22032 0.99430 0.97679 0.93716 0.78315 0.87172 0.89607 0.91725 0.89805 0.89134 0.90921 0.89987 0.89009 0.91148 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.26 -5.81 19.25 29.55 0.57 -5.24 16 2 C -0.11 -2.57 10.48 -37.12 -0.39 -2.96 16 3 C 0.21 4.92 4.75 -6.83 -0.03 4.89 16 4 N -0.42 -10.96 2.61 -119.26 -0.31 -11.27 16 5 C -0.31 -8.58 9.30 -15.02 -0.14 -8.72 16 6 H 0.11 3.09 7.42 -52.48 -0.39 2.70 16 7 C 0.03 0.83 4.90 -17.45 -0.09 0.74 16 8 N -0.85 -22.34 9.54 55.50 0.53 -21.81 16 9 Si 0.93 20.11 29.60 -169.99 -5.03 15.08 16 10 H -0.27 -5.79 7.11 56.52 0.40 -5.39 16 11 H -0.28 -6.09 7.11 56.52 0.40 -5.69 16 12 H -0.27 -5.82 7.11 56.52 0.40 -5.42 16 13 C 0.46 11.89 7.46 -12.64 -0.09 11.80 16 14 O -0.57 -15.79 14.94 5.23 0.08 -15.72 16 15 C 0.06 1.24 7.12 -37.70 -0.27 0.97 16 16 F -0.14 -2.82 12.57 2.25 0.03 -2.79 16 17 C -0.17 -3.19 6.89 -100.41 -0.69 -3.88 16 18 C -0.07 -1.15 6.95 -27.56 -0.19 -1.35 16 19 C -0.14 -1.75 8.17 -26.18 -0.21 -1.97 16 20 C -0.09 -1.26 7.96 -27.39 -0.22 -1.48 16 21 H 0.20 3.56 7.80 -54.10 -0.42 3.14 16 22 H 0.11 2.68 6.26 -51.93 -0.33 2.35 16 23 H 0.09 1.83 5.51 -51.93 -0.29 1.54 16 24 H 0.27 6.76 8.31 -40.82 -0.34 6.42 16 25 H 0.08 1.50 7.62 -51.93 -0.40 1.10 16 26 H 0.09 1.39 8.14 -51.93 -0.42 0.97 16 27 H 0.07 0.74 8.14 -51.93 -0.42 0.31 16 28 H 0.08 0.98 8.14 -51.93 -0.42 0.55 16 29 H 0.09 1.13 8.14 -51.93 -0.42 0.71 16 30 H 0.07 0.91 8.14 -51.93 -0.42 0.48 16 LS Contribution 267.43 15.07 4.03 4.03 Total: -1.00 -30.38 267.43 -5.50 -35.88 By element: Atomic # 1 Polarization: 6.86 SS G_CDS: -3.07 Total: 3.79 kcal Atomic # 6 Polarization: -5.44 SS G_CDS: -1.75 Total: -7.19 kcal Atomic # 7 Polarization: -33.30 SS G_CDS: 0.22 Total: -33.08 kcal Atomic # 8 Polarization: -15.79 SS G_CDS: 0.08 Total: -15.72 kcal Atomic # 9 Polarization: -2.82 SS G_CDS: 0.03 Total: -2.79 kcal Atomic # 14 Polarization: 20.11 SS G_CDS: -5.03 Total: 15.08 kcal Total LS contribution 4.03 Total: 4.03 kcal Total: -30.38 -5.50 -35.88 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491783607.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.392 kcal (2) G-P(sol) polarization free energy of solvation -30.380 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.012 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.498 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.877 kcal (6) G-S(sol) free energy of system = (1) + (5) 40.515 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds