Wall clock time and date at job start Thu Apr 9 2020 12:12:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.53001 * 109.47016 * 2 1 4 4 C 1.53005 * 109.47125 * 240.00513 * 2 1 3 5 5 N 1.46509 * 109.46859 * 294.99948 * 4 2 1 6 6 C 1.35051 * 125.57439 * 90.02576 * 5 4 2 7 7 O 1.21339 * 127.25340 * 359.94111 * 6 5 4 8 8 C 1.49573 * 105.49423 * 179.97438 * 6 5 4 9 9 O 1.21406 * 127.25164 * 179.97438 * 8 6 5 10 10 N 1.35054 * 105.50125 * 0.02562 * 8 6 5 11 11 C 1.37009 * 125.57375 * 180.02562 * 10 8 6 12 12 H 1.08004 * 119.99895 * 211.37152 * 11 10 8 13 13 C 1.39247 * 120.00400 * 31.37535 * 11 10 8 14 14 N 1.31165 * 119.99999 * 19.56613 * 13 11 10 15 15 Si 1.86799 * 119.99876 * 199.56487 * 13 11 10 16 16 H 1.48500 * 109.46889 * 90.00126 * 15 13 11 17 17 H 1.48502 * 109.46978 * 209.99798 * 15 13 11 18 18 H 1.48506 * 109.47411 * 330.00090 * 15 13 11 19 19 C 1.34284 * 108.84565 * 359.76674 * 10 8 6 20 20 O 1.21433 * 124.34797 * 180.26904 * 19 10 8 21 21 H 1.08991 * 109.46895 * 299.99485 * 1 2 3 22 22 H 1.09000 * 109.47427 * 60.00222 * 1 2 3 23 23 H 1.08999 * 109.47086 * 179.97438 * 1 2 3 24 24 H 1.08992 * 109.47177 * 120.00599 * 2 1 3 25 25 H 1.09001 * 109.46507 * 60.00085 * 3 2 1 26 26 H 1.08999 * 109.46730 * 180.02562 * 3 2 1 27 27 H 1.08998 * 109.47380 * 300.00670 * 3 2 1 28 28 H 1.08999 * 109.47117 * 54.99610 * 4 2 1 29 29 H 1.08993 * 109.47221 * 174.99900 * 4 2 1 30 30 H 0.96994 * 120.00201 * 180.02562 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 7 1.6524 -2.1328 -1.1907 6 6 0.5062 -2.6538 -1.6792 7 8 -0.3898 -2.0593 -2.2414 8 6 0.5735 -4.1178 -1.3805 9 8 -0.2568 -4.9617 -1.6496 10 7 1.7520 -4.3032 -0.7474 11 6 2.2301 -5.5023 -0.2881 12 1 2.8579 -5.5326 0.5902 13 6 1.9067 -6.6818 -0.9537 14 7 1.4880 -6.6402 -2.1961 15 14 2.0691 -8.3234 -0.0773 16 1 0.7905 -8.6494 0.6039 17 1 2.3868 -9.3837 -1.0673 18 1 3.1590 -8.2422 0.9281 19 6 2.3810 -3.1211 -0.6467 20 8 3.4681 -2.9654 -0.1286 21 1 -0.3633 0.5137 0.8900 22 1 -0.3634 0.5138 -0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 1.8933 -0.5139 0.8899 25 1 1.6766 1.9562 0.8900 26 1 3.1300 1.4425 -0.0005 27 1 1.6766 1.9564 -0.8899 28 1 1.6054 -0.2616 -2.1370 29 1 3.1263 -0.6442 -1.2953 30 1 1.2624 -7.4618 -2.6596 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000003454283.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 12:12:06 Heat of formation + Delta-G solvation = -66.529591 kcal Electronic energy + Delta-G solvation = -17812.642163 eV Core-core repulsion = 14802.869776 eV Total energy + Delta-G solvation = -3009.772387 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 240.094 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -42.23253 -38.18245 -37.74689 -36.06775 -35.11231 -33.89410 -31.98138 -27.82820 -27.12055 -25.05287 -24.43516 -21.44459 -20.88946 -19.77741 -18.18802 -16.64926 -16.40489 -15.89686 -15.63024 -14.89969 -14.62844 -14.18846 -14.09674 -13.91239 -13.48919 -12.89760 -12.79916 -12.24201 -11.99733 -11.88419 -11.49029 -11.36002 -11.16160 -11.03507 -10.90534 -10.68082 -10.51023 -9.95186 -9.59929 -9.27723 -8.90416 -8.24430 -6.65080 -4.42696 1.39075 2.79204 3.10422 3.18196 3.21074 3.47569 3.59766 4.03854 4.17898 4.82200 4.89861 4.93894 5.05854 5.24284 5.40517 5.56256 5.67174 5.78267 5.87710 5.92451 6.00663 6.11788 6.33956 6.38825 6.51855 7.21627 7.56656 7.64913 7.78160 8.43079 8.53251 8.86746 9.35968 10.43744 Molecular weight = 240.09amu Principal moments of inertia in cm(-1) A = 0.039597 B = 0.007992 C = 0.007143 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 706.947574 B = 3502.683781 C = 3919.226381 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.116 4.116 3 C -0.141 4.141 4 C 0.126 3.874 5 N -0.587 5.587 6 C 0.506 3.494 7 O -0.454 6.454 8 C 0.457 3.543 9 O -0.413 6.413 10 N -0.394 5.394 11 C -0.351 4.351 12 H 0.113 0.887 13 C 0.055 3.945 14 N -0.817 5.817 15 Si 0.939 3.061 16 H -0.271 1.271 17 H -0.280 1.280 18 H -0.264 1.264 19 C 0.679 3.321 20 O -0.521 6.521 21 H 0.054 0.946 22 H 0.059 0.941 23 H 0.051 0.949 24 H 0.078 0.922 25 H 0.058 0.942 26 H 0.058 0.942 27 H 0.056 0.944 28 H 0.090 0.910 29 H 0.094 0.906 30 H 0.280 0.720 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.572 9.714 2.738 10.109 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.135 4.135 3 C -0.199 4.199 4 C 0.005 3.995 5 N -0.337 5.337 6 C 0.290 3.710 7 O -0.322 6.322 8 C 0.239 3.761 9 O -0.280 6.280 10 N -0.128 5.128 11 C -0.477 4.477 12 H 0.131 0.869 13 C -0.158 4.158 14 N -0.449 5.449 15 Si 0.763 3.237 16 H -0.196 1.196 17 H -0.205 1.205 18 H -0.189 1.189 19 C 0.386 3.614 20 O -0.395 6.395 21 H 0.073 0.927 22 H 0.078 0.922 23 H 0.070 0.930 24 H 0.097 0.903 25 H 0.077 0.923 26 H 0.077 0.923 27 H 0.075 0.925 28 H 0.108 0.892 29 H 0.112 0.888 30 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 0.163 9.531 2.387 9.827 hybrid contribution 0.137 -0.685 0.159 0.716 sum 0.300 8.846 2.546 9.210 Atomic orbital electron populations 1.21847 0.94566 1.02106 1.01739 1.21540 0.96709 0.96603 0.98678 1.21736 1.01142 0.94978 1.02009 1.21686 1.01622 0.77178 0.99010 1.46887 1.20875 1.09817 1.56072 1.21821 0.81235 0.90924 0.77032 1.90688 1.35888 1.68866 1.36751 1.20213 0.83602 0.87794 0.84447 1.90664 1.41009 1.48013 1.48338 1.42043 1.14914 1.07135 1.48693 1.19503 1.36451 0.79482 1.12214 0.86917 1.25508 0.95299 1.00561 0.94466 1.69816 1.35819 1.30627 1.08664 0.85760 0.79193 0.79623 0.79117 1.19634 1.20504 1.18865 1.16674 0.83717 0.81243 0.79796 1.90806 1.18543 1.83698 1.46432 0.92692 0.92204 0.92958 0.90343 0.92308 0.92306 0.92456 0.89175 0.88782 0.90972 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.97 8.52 37.16 0.32 -1.65 16 2 C -0.12 -1.52 3.13 -90.62 -0.28 -1.81 16 3 C -0.14 -1.40 9.19 37.16 0.34 -1.06 16 4 C 0.13 1.88 5.30 -4.03 -0.02 1.86 16 5 N -0.59 -11.50 2.49 -121.37 -0.30 -11.80 16 6 C 0.51 10.99 6.85 -11.40 -0.08 10.92 16 7 O -0.45 -9.89 17.00 5.51 0.09 -9.79 16 8 C 0.46 11.64 7.56 -11.40 -0.09 11.55 16 9 O -0.41 -11.59 15.47 5.45 0.08 -11.50 16 10 N -0.39 -10.09 2.73 -66.18 -0.18 -10.27 16 11 C -0.35 -9.34 9.65 -14.86 -0.14 -9.48 16 12 H 0.11 2.89 7.91 -52.48 -0.42 2.48 16 13 C 0.06 1.44 4.91 -17.46 -0.09 1.35 16 14 N -0.82 -22.65 11.13 55.51 0.62 -22.03 16 15 Si 0.94 19.98 29.60 -169.99 -5.03 14.95 16 16 H -0.27 -5.77 7.11 56.52 0.40 -5.37 16 17 H -0.28 -5.83 7.11 56.52 0.40 -5.43 16 18 H -0.26 -5.40 7.11 56.52 0.40 -5.00 16 19 C 0.68 15.63 8.27 -87.79 -0.73 14.90 16 20 O -0.52 -12.57 17.33 5.42 0.09 -12.47 16 21 H 0.05 0.64 8.14 -51.93 -0.42 0.22 16 22 H 0.06 0.78 8.14 -51.93 -0.42 0.36 16 23 H 0.05 0.85 6.17 -51.93 -0.32 0.53 16 24 H 0.08 1.13 8.14 -51.93 -0.42 0.71 16 25 H 0.06 0.53 8.14 -51.93 -0.42 0.11 16 26 H 0.06 0.55 8.14 -51.93 -0.42 0.13 16 27 H 0.06 0.51 8.14 -51.93 -0.42 0.09 16 28 H 0.09 1.21 8.10 -51.93 -0.42 0.79 16 29 H 0.09 1.32 7.98 -51.93 -0.41 0.90 16 30 H 0.28 7.26 8.30 -40.82 -0.34 6.92 16 LS Contribution 267.77 15.07 4.04 4.04 Total: -1.00 -30.28 267.77 -4.60 -34.87 By element: Atomic # 1 Polarization: 0.68 SS G_CDS: -3.24 Total: -2.57 kcal Atomic # 6 Polarization: 27.35 SS G_CDS: -0.77 Total: 26.59 kcal Atomic # 7 Polarization: -44.24 SS G_CDS: 0.13 Total: -44.11 kcal Atomic # 8 Polarization: -34.04 SS G_CDS: 0.27 Total: -33.77 kcal Atomic # 14 Polarization: 19.98 SS G_CDS: -5.03 Total: 14.95 kcal Total LS contribution 4.04 Total: 4.04 kcal Total: -30.28 -4.60 -34.87 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000003454283.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.658 kcal (2) G-P(sol) polarization free energy of solvation -30.277 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.934 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.596 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.872 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.530 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds