Wall clock time and date at job start Thu Apr 9 2020 12:15:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42900 * 113.99744 * 2 1 4 4 C 1.53004 * 109.46988 * 179.97438 * 3 2 1 5 5 N 1.46506 * 109.46674 * 65.00143 * 4 3 2 6 6 C 1.46221 * 124.85232 * 269.71802 * 5 4 3 7 7 N 1.46793 * 108.05656 * 179.83623 * 6 5 4 8 8 C 1.34778 * 127.03656 * 180.15872 * 7 6 5 9 9 O 1.21689 * 119.99194 * 0.28184 * 8 7 6 10 10 C 1.46368 * 120.00513 * 180.28127 * 8 7 6 11 11 H 1.08002 * 120.00141 * 353.84720 * 10 8 7 12 12 C 1.40050 * 119.99936 * 173.84716 * 10 8 7 13 13 N 1.30664 * 120.00258 * 6.12697 * 12 10 8 14 14 Si 1.86806 * 119.99664 * 186.13227 * 12 10 8 15 15 H 1.48499 * 109.47025 * 94.98480 * 14 12 10 16 16 H 1.48504 * 109.46652 * 214.98168 * 14 12 10 17 17 H 1.48497 * 109.46946 * 334.98037 * 14 12 10 18 18 C 1.46989 * 105.93580 * 0.41107 * 7 6 5 19 19 C 1.34297 * 124.85394 * 90.02543 * 5 4 3 20 20 O 1.21279 * 125.42479 * 359.97438 * 19 5 4 21 21 H 1.09005 * 109.47219 * 60.00011 * 1 2 3 22 22 H 1.08998 * 109.46908 * 179.97438 * 1 2 3 23 23 H 1.09001 * 109.47439 * 300.00113 * 1 2 3 24 24 H 1.08996 * 109.47590 * 59.99846 * 3 2 1 25 25 H 1.09001 * 109.47143 * 299.99613 * 3 2 1 26 26 H 1.08999 * 109.46725 * 184.99731 * 4 3 2 27 27 H 1.08998 * 109.46933 * 305.00004 * 4 3 2 28 28 H 1.09000 * 109.75264 * 299.65962 * 6 5 4 29 29 H 1.09001 * 109.75323 * 60.34703 * 6 5 4 30 30 H 0.97002 * 120.00449 * 179.97438 * 13 12 10 31 31 H 1.09002 * 110.04113 * 240.46378 * 18 7 6 32 32 H 1.09006 * 110.07551 * 119.04565 * 18 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5355 1.1847 0.0006 5 7 3.9766 0.5640 -1.2510 6 6 4.1478 -0.8736 -1.4558 7 7 4.5956 -1.0862 -2.8375 8 6 4.8659 -2.2658 -3.4309 9 8 4.7396 -3.3033 -2.8076 10 6 5.3112 -2.2989 -4.8248 11 1 5.3282 -1.3900 -5.4080 12 6 5.7152 -3.5091 -5.4023 13 7 5.5824 -4.6265 -4.7380 14 14 6.4442 -3.5258 -7.1221 15 1 7.9258 -3.4824 -7.0322 16 1 6.0270 -4.7661 -7.8244 17 1 5.9591 -2.3426 -7.8769 18 6 4.6949 0.2509 -3.4398 19 6 4.2872 1.2345 -2.3724 20 8 4.2459 2.4393 -2.5053 21 1 -0.3634 0.5139 -0.8900 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3634 0.5138 0.8900 24 1 1.6886 1.8464 0.8899 25 1 1.6886 1.8464 -0.8900 26 1 3.9784 2.1766 0.0902 27 1 3.8507 0.5686 0.8427 28 1 4.8940 -1.2585 -0.7607 29 1 3.1980 -1.3841 -1.2963 30 1 5.8619 -5.4648 -5.1381 31 1 4.0222 0.3267 -4.2941 32 1 5.7205 0.4445 -3.7541 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000282521352.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 12:15:19 Heat of formation + Delta-G solvation = -95.654316 kcal Electronic energy + Delta-G solvation = -17646.583784 eV Core-core repulsion = 14608.236976 eV Total energy + Delta-G solvation = -3038.346808 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 242.110 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.23948 -37.87324 -37.25987 -35.63485 -33.51241 -32.57788 -29.87162 -27.71265 -26.88805 -26.17846 -24.09843 -22.79806 -19.98093 -19.25123 -17.28345 -16.54120 -16.39264 -16.07041 -15.60260 -15.12607 -15.00257 -14.75351 -14.16298 -13.91661 -13.35455 -12.94478 -12.81272 -12.44819 -12.10723 -11.96219 -11.86938 -11.57168 -11.27877 -11.16818 -11.00748 -10.51793 -10.27852 -9.83018 -9.59930 -8.97000 -8.68955 -7.85428 -7.42762 -6.33396 -4.77559 2.77888 3.05964 3.09994 3.18137 3.21882 3.71961 3.97450 4.28973 4.42798 4.77355 4.95441 5.05631 5.15443 5.29738 5.30850 5.40952 5.55006 5.62929 5.67721 5.88477 5.99405 6.07476 6.25298 6.49203 6.73898 7.07616 7.33786 7.44368 7.91216 8.22500 8.38377 8.89892 9.24036 10.39754 10.60111 Molecular weight = 242.11amu Principal moments of inertia in cm(-1) A = 0.032504 B = 0.006132 C = 0.005536 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 861.222029 B = 4565.253198 C = 5056.765199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.384 6.384 3 C 0.042 3.958 4 C 0.136 3.864 5 N -0.620 5.620 6 C 0.342 3.658 7 N -0.649 5.649 8 C 0.580 3.420 9 O -0.566 6.566 10 C -0.535 4.535 11 H 0.073 0.927 12 C 0.087 3.913 13 N -0.764 5.764 14 Si 0.912 3.088 15 H -0.271 1.271 16 H -0.278 1.278 17 H -0.263 1.263 18 C 0.090 3.910 19 C 0.516 3.484 20 O -0.540 6.540 21 H 0.039 0.961 22 H 0.086 0.914 23 H 0.038 0.962 24 H 0.059 0.941 25 H 0.053 0.947 26 H 0.099 0.901 27 H 0.090 0.910 28 H 0.060 0.940 29 H 0.072 0.928 30 H 0.271 0.729 31 H 0.093 0.907 32 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.490 9.468 6.843 12.908 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 O -0.302 6.302 3 C -0.035 4.035 4 C 0.014 3.986 5 N -0.355 5.355 6 C 0.134 3.866 7 N -0.393 5.393 8 C 0.388 3.612 9 O -0.447 6.447 10 C -0.571 4.571 11 H 0.091 0.909 12 C -0.133 4.133 13 N -0.392 5.392 14 Si 0.737 3.263 15 H -0.196 1.196 16 H -0.203 1.203 17 H -0.187 1.187 18 C -0.038 4.038 19 C 0.305 3.695 20 O -0.418 6.418 21 H 0.058 0.942 22 H 0.105 0.895 23 H 0.057 0.943 24 H 0.077 0.923 25 H 0.072 0.928 26 H 0.117 0.883 27 H 0.108 0.892 28 H 0.078 0.922 29 H 0.090 0.910 30 H 0.082 0.918 31 H 0.111 0.889 32 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -5.456 9.040 7.158 12.756 hybrid contribution 0.053 0.289 -0.752 0.808 sum -5.403 9.329 6.406 12.540 Atomic orbital electron populations 1.22721 0.81140 1.02863 0.99594 1.87956 1.19638 1.27293 1.95339 1.23051 0.94388 0.85423 1.00681 1.21351 0.92069 0.99513 0.85687 1.48368 1.66159 1.08630 1.12297 1.21041 0.99795 0.78303 0.87487 1.48840 1.74434 1.05778 1.10231 1.18042 0.77168 0.78480 0.87489 1.90647 1.57344 1.30325 1.66382 1.20837 1.46560 0.95263 0.94479 0.90855 1.25733 0.93795 0.94806 0.98995 1.70008 1.34106 0.98484 1.36647 0.86271 0.79617 0.78586 0.81867 1.19641 1.20332 1.18684 1.21473 1.03307 0.83624 0.95398 1.21058 0.75689 0.88480 0.84317 1.90686 1.55181 1.13406 1.82515 0.94216 0.89522 0.94345 0.92295 0.92826 0.88308 0.89192 0.92207 0.91026 0.91790 0.88878 0.88751 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.35 11.01 101.05 1.11 1.47 16 2 O -0.38 -5.32 10.06 -35.23 -0.35 -5.68 16 3 C 0.04 0.50 6.28 37.16 0.23 0.74 16 4 C 0.14 1.71 6.37 -4.04 -0.03 1.68 16 5 N -0.62 -10.31 2.87 -177.58 -0.51 -10.82 16 6 C 0.34 6.67 7.51 -63.73 -0.48 6.19 16 7 N -0.65 -14.76 3.36 -179.91 -0.60 -15.37 16 8 C 0.58 16.18 7.81 -12.99 -0.10 16.08 16 9 O -0.57 -17.87 15.44 5.20 0.08 -17.79 16 10 C -0.53 -14.61 9.09 -35.63 -0.32 -14.93 16 11 H 0.07 1.84 7.27 -52.49 -0.38 1.45 16 12 C 0.09 2.35 5.49 -17.37 -0.10 2.26 16 13 N -0.76 -22.17 11.85 55.55 0.66 -21.51 16 14 Si 0.91 19.52 29.56 -169.99 -5.03 14.50 16 15 H -0.27 -5.69 7.11 56.52 0.40 -5.29 16 16 H -0.28 -5.83 7.11 56.52 0.40 -5.43 16 17 H -0.26 -5.44 7.11 56.52 0.40 -5.04 16 18 C 0.09 1.72 6.29 -4.89 -0.03 1.69 16 19 C 0.52 9.44 8.13 -11.17 -0.09 9.35 16 20 O -0.54 -10.67 17.67 5.56 0.10 -10.57 16 21 H 0.04 0.41 8.14 -51.93 -0.42 -0.02 16 22 H 0.09 0.86 8.14 -51.93 -0.42 0.44 16 23 H 0.04 0.33 8.14 -51.93 -0.42 -0.10 16 24 H 0.06 0.53 8.14 -51.93 -0.42 0.11 16 25 H 0.05 0.70 8.14 -51.93 -0.42 0.28 16 26 H 0.10 1.12 7.98 -51.93 -0.41 0.70 16 27 H 0.09 0.98 8.14 -51.93 -0.42 0.56 16 28 H 0.06 1.16 8.14 -51.93 -0.42 0.74 16 29 H 0.07 1.47 7.61 -51.93 -0.40 1.07 16 30 H 0.27 7.10 8.29 -40.82 -0.34 6.77 16 31 H 0.09 1.74 8.14 -51.93 -0.42 1.32 16 32 H 0.09 1.74 8.14 -51.93 -0.42 1.32 16 LS Contribution 284.55 15.07 4.29 4.29 Total: -1.00 -34.24 284.55 -5.30 -39.54 By element: Atomic # 1 Polarization: 3.02 SS G_CDS: -4.13 Total: -1.11 kcal Atomic # 6 Polarization: 24.32 SS G_CDS: 0.20 Total: 24.52 kcal Atomic # 7 Polarization: -47.24 SS G_CDS: -0.46 Total: -47.70 kcal Atomic # 8 Polarization: -33.86 SS G_CDS: -0.18 Total: -34.04 kcal Atomic # 14 Polarization: 19.52 SS G_CDS: -5.03 Total: 14.50 kcal Total LS contribution 4.29 Total: 4.29 kcal Total: -34.24 -5.30 -39.54 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000282521352.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.116 kcal (2) G-P(sol) polarization free energy of solvation -34.238 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.354 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.300 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.538 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.654 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds