Wall clock time and date at job start Thu Apr 9 2020 12:17:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 N 1.34947 * 126.08287 * 2 1 4 4 H 0.96997 * 125.99034 * 0.02562 * 3 2 1 5 5 N 1.40079 * 108.01857 * 179.79946 * 3 2 1 6 6 C 1.31111 * 108.18615 * 0.38298 * 5 3 2 7 7 O 1.35993 * 125.95379 * 179.89382 * 6 5 3 8 8 C 1.42894 * 117.00306 * 359.68370 * 7 6 5 9 9 H 1.09003 * 109.46771 * 30.00556 * 8 7 6 10 10 C 1.50695 * 109.47203 * 150.00381 * 8 7 6 11 11 H 1.08008 * 119.99831 * 95.31673 * 10 8 7 12 12 C 1.37872 * 120.00381 * 275.31038 * 10 8 7 13 13 N 1.31522 * 119.99792 * 6.04449 * 12 10 8 14 14 Si 1.86800 * 120.00363 * 186.03628 * 12 10 8 15 15 H 1.48508 * 109.46851 * 270.00048 * 14 12 10 16 16 H 1.48496 * 109.47009 * 30.00273 * 14 12 10 17 17 H 1.48498 * 109.47021 * 150.00676 * 14 12 10 18 18 C 1.53004 * 109.47278 * 270.00759 * 8 7 6 19 19 Cl 1.80301 * 109.47265 * 65.70932 * 18 8 7 20 20 C 1.35281 * 126.08420 * 180.02562 * 2 1 3 21 21 C 1.50703 * 126.06250 * 359.97438 * 20 2 1 22 22 H 1.09000 * 109.46655 * 269.96717 * 1 2 3 23 23 H 1.09000 * 109.47028 * 29.97172 * 1 2 3 24 24 H 1.09006 * 109.47097 * 149.97506 * 1 2 3 25 25 H 0.97000 * 119.99814 * 355.11436 * 13 12 10 26 26 H 1.08998 * 109.47313 * 185.71247 * 18 8 7 27 27 H 1.09007 * 109.46860 * 305.71050 * 18 8 7 28 28 H 1.08997 * 109.46706 * 269.97346 * 21 20 2 29 29 H 1.08993 * 109.47311 * 29.97175 * 21 20 2 30 30 H 1.09004 * 109.47215 * 149.97624 * 21 20 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 7 2.3018 1.0906 0.0000 4 1 2.0033 2.0135 0.0004 5 7 3.6336 0.6562 0.0047 6 6 3.6364 -0.6549 -0.0010 7 8 4.7389 -1.4510 -0.0010 8 6 6.0103 -0.7985 -0.0014 9 1 5.9272 0.1592 0.5124 10 6 7.0191 -1.6638 0.7089 11 1 7.6543 -2.3287 0.1424 12 6 7.1314 -1.6066 2.0819 13 7 6.2806 -0.8882 2.7818 14 14 8.4916 -2.5496 2.9480 15 1 8.0081 -3.9108 3.2927 16 1 9.6697 -2.6552 2.0502 17 1 8.8780 -1.8324 4.1895 18 6 6.4637 -0.5658 -1.4440 19 17 5.3478 0.6031 -2.2436 20 6 2.3038 -1.0933 -0.0005 21 6 1.8418 -2.5277 -0.0006 22 1 -0.3632 -0.0006 1.0277 23 1 -0.3633 0.8902 -0.5134 24 1 -0.3633 -0.8898 -0.5142 25 1 5.6188 -0.3427 2.3288 26 1 7.4759 -0.1613 -1.4460 27 1 6.4491 -1.5112 -1.9865 28 1 1.7313 -2.8738 1.0271 29 1 0.8829 -2.6006 -0.5136 30 1 2.5772 -3.1463 -0.5152 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001226510708.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 12:17:59 Heat of formation + Delta-G solvation = 8.070681 kcal Electronic energy + Delta-G solvation = -15968.226281 eV Core-core repulsion = 13211.941918 eV Total energy + Delta-G solvation = -2756.284363 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 244.072 amu Computer time = 0.16 seconds Orbital eigenvalues (eV) -40.60580 -37.34919 -34.94335 -33.24825 -32.35475 -31.11669 -29.51955 -27.59957 -25.06662 -24.69834 -22.15446 -19.99757 -18.97929 -17.26539 -16.65114 -15.76231 -15.07046 -14.21274 -13.93429 -13.71511 -13.53563 -12.99706 -12.63887 -12.52064 -12.18741 -11.94928 -11.91024 -11.77008 -11.37554 -11.05445 -10.90120 -10.31881 -10.20922 -9.76267 -9.65907 -9.30780 -8.84347 -8.68109 -7.86521 -7.45843 -6.67075 -4.48471 2.47295 3.14703 3.33971 3.35438 3.44494 3.53171 3.69333 4.29900 4.44945 5.10606 5.26613 5.36882 5.55108 5.57959 5.79313 5.88019 5.93450 5.96814 6.20995 6.26715 6.38473 6.53822 6.74113 6.87107 7.10880 7.67220 7.89752 8.13394 8.40011 8.54465 8.85439 9.32938 10.72645 Molecular weight = 244.07amu Principal moments of inertia in cm(-1) A = 0.023658 B = 0.008729 C = 0.007218 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1183.234338 B = 3206.879045 C = 3878.441648 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.084 3.916 3 N -0.480 5.480 4 H 0.431 0.569 5 N -0.327 5.327 6 C 0.286 3.714 7 O -0.294 6.294 8 C 0.185 3.815 9 H 0.057 0.943 10 C -0.599 4.599 11 H 0.064 0.936 12 C 0.034 3.966 13 N -0.875 5.875 14 Si 1.079 2.921 15 H -0.283 1.283 16 H -0.284 1.284 17 H -0.281 1.281 18 C -0.030 4.030 19 Cl -0.211 7.211 20 C -0.252 4.252 21 C -0.061 4.061 22 H 0.075 0.925 23 H 0.065 0.935 24 H 0.081 0.919 25 H 0.279 0.721 26 H 0.093 0.907 27 H 0.082 0.918 28 H 0.054 0.946 29 H 0.050 0.950 30 H 0.062 0.938 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.299 1.170 -5.329 9.932 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.044 4.044 3 N -0.191 5.191 4 H 0.273 0.727 5 N -0.167 5.167 6 C 0.080 3.920 7 O -0.198 6.198 8 C 0.132 3.868 9 H 0.075 0.925 10 C -0.635 4.635 11 H 0.082 0.918 12 C -0.176 4.176 13 N -0.508 5.508 14 Si 0.905 3.095 15 H -0.209 1.209 16 H -0.209 1.209 17 H -0.206 1.206 18 C -0.093 4.093 19 Cl -0.185 7.185 20 C -0.264 4.264 21 C -0.119 4.119 22 H 0.094 0.906 23 H 0.084 0.916 24 H 0.100 0.900 25 H 0.091 0.909 26 H 0.112 0.888 27 H 0.100 0.900 28 H 0.073 0.927 29 H 0.069 0.931 30 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges -6.944 1.537 -3.914 8.118 hybrid contribution -1.214 0.419 -1.638 2.082 sum -8.158 1.956 -5.552 10.060 Atomic orbital electron populations 1.20372 0.88025 1.03189 1.02850 1.20556 0.93785 0.87425 1.02644 1.45627 1.03827 1.07094 1.62577 0.72660 1.77680 0.95076 1.11315 1.32667 1.20795 0.89070 0.88505 0.93596 1.86878 1.12567 1.33502 1.86885 1.20605 0.79644 0.96719 0.89873 0.92548 1.21864 1.17960 1.28928 0.94746 0.91795 1.26164 0.99743 0.97046 0.94615 1.70688 1.16349 1.24176 1.39635 0.83418 0.74471 0.75888 0.75740 1.20913 1.20929 1.20596 1.25182 0.94246 0.92839 0.97032 1.98672 1.69655 1.66423 1.83739 1.19245 0.90194 0.96058 1.20903 1.19910 0.99699 0.91281 1.01001 0.90603 0.91616 0.90019 0.90939 0.88844 0.89980 0.92717 0.93064 0.91920 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.93 10.21 36.01 0.37 -0.56 16 2 C 0.08 1.39 7.20 -82.27 -0.59 0.80 16 3 N -0.48 -8.43 7.35 33.47 0.25 -8.18 16 4 H 0.43 5.90 8.96 -182.62 -1.64 4.26 16 5 N -0.33 -7.35 9.69 30.56 0.30 -7.06 16 6 C 0.29 6.77 6.89 -17.09 -0.12 6.65 16 7 O -0.29 -7.73 9.83 -19.72 -0.19 -7.92 16 8 C 0.19 4.81 1.83 -27.88 -0.05 4.76 16 9 H 0.06 1.60 6.12 -51.93 -0.32 1.28 16 10 C -0.60 -16.46 8.69 -34.44 -0.30 -16.76 16 11 H 0.06 1.69 7.82 -52.48 -0.41 1.28 16 12 C 0.03 0.96 5.45 -17.82 -0.10 0.86 16 13 N -0.88 -26.23 13.63 55.43 0.76 -25.48 16 14 Si 1.08 24.15 29.91 -169.99 -5.08 19.07 16 15 H -0.28 -6.15 7.11 56.52 0.40 -5.75 16 16 H -0.28 -5.94 7.11 56.52 0.40 -5.54 16 17 H -0.28 -6.24 7.11 56.52 0.40 -5.84 16 18 C -0.03 -0.66 6.31 37.16 0.23 -0.43 16 19 Cl -0.21 -4.43 26.18 -51.86 -1.36 -5.79 16 20 C -0.25 -5.01 6.11 -104.91 -0.64 -5.66 16 21 C -0.06 -1.03 10.15 36.01 0.37 -0.66 16 22 H 0.08 0.74 8.14 -51.93 -0.42 0.32 16 23 H 0.06 0.57 8.14 -51.93 -0.42 0.15 16 24 H 0.08 0.80 7.14 -51.93 -0.37 0.43 16 25 H 0.28 8.60 6.80 -40.82 -0.28 8.32 16 26 H 0.09 1.92 8.14 -51.93 -0.42 1.50 16 27 H 0.08 1.73 8.14 -51.93 -0.42 1.30 16 28 H 0.05 0.90 8.14 -51.93 -0.42 0.48 16 29 H 0.05 0.69 7.14 -51.93 -0.37 0.31 16 30 H 0.06 1.12 8.14 -51.93 -0.42 0.70 16 LS Contribution 273.60 15.07 4.12 4.12 Total: -1.00 -32.27 273.60 -6.76 -39.03 By element: Atomic # 1 Polarization: 7.93 SS G_CDS: -4.72 Total: 3.21 kcal Atomic # 6 Polarization: -10.17 SS G_CDS: -0.83 Total: -11.00 kcal Atomic # 7 Polarization: -42.02 SS G_CDS: 1.30 Total: -40.72 kcal Atomic # 8 Polarization: -7.73 SS G_CDS: -0.19 Total: -7.92 kcal Atomic # 14 Polarization: 24.15 SS G_CDS: -5.08 Total: 19.07 kcal Atomic # 17 Polarization: -4.43 SS G_CDS: -1.36 Total: -5.79 kcal Total LS contribution 4.12 Total: 4.12 kcal Total: -32.27 -6.76 -39.03 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001226510708.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.100 kcal (2) G-P(sol) polarization free energy of solvation -32.267 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.833 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.762 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.030 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.071 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.16 seconds