Wall clock time and date at job start Thu Apr 9 2020 13:43:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.35667 * 125.69444 * 2 1 4 4 Cl 1.73598 * 125.58529 * 0.02562 * 3 2 1 5 5 C 1.35729 * 108.82776 * 180.26781 * 3 2 1 6 6 Cl 1.73601 * 126.06079 * 179.74840 * 5 3 2 7 7 C 1.39786 * 107.87458 * 359.73486 * 5 3 2 8 8 C 1.37801 * 125.69374 * 179.80618 * 2 1 3 9 9 C 1.46538 * 126.22424 * 359.97438 * 8 2 1 10 10 O 1.21716 * 119.99906 * 4.66202 * 9 8 2 11 11 N 1.34782 * 120.00454 * 184.67071 * 9 8 2 12 12 C 1.46496 * 120.00140 * 174.95023 * 11 9 8 13 13 C 1.50702 * 109.46891 * 180.27173 * 12 11 9 14 14 H 1.08003 * 120.00329 * 0.02562 * 13 12 11 15 15 C 1.37875 * 120.00040 * 179.97438 * 13 12 11 16 16 N 1.31513 * 120.00011 * 180.02562 * 15 13 12 17 17 Si 1.86805 * 119.99883 * 0.02562 * 15 13 12 18 18 H 1.48500 * 109.47095 * 89.99922 * 17 15 13 19 19 H 1.48498 * 109.46953 * 209.99741 * 17 15 13 20 20 H 1.48497 * 109.46997 * 329.99904 * 17 15 13 21 21 H 1.09008 * 109.47094 * 274.85950 * 1 2 3 22 22 H 1.09001 * 109.47267 * 34.85099 * 1 2 3 23 23 H 1.08993 * 109.47272 * 154.85526 * 1 2 3 24 24 H 1.08000 * 126.43258 * 179.97438 * 7 5 3 25 25 H 0.97001 * 119.99424 * 355.21878 * 11 9 8 26 26 H 1.09003 * 109.47074 * 300.26573 * 12 11 9 27 27 H 1.08993 * 109.47440 * 60.27535 * 12 11 9 28 28 H 0.97009 * 119.99926 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2566 1.1018 0.0000 4 17 1.6994 2.7460 0.0006 5 6 3.5555 0.7080 -0.0060 6 17 4.9405 1.7545 -0.0146 7 6 3.5801 -0.6896 -0.0038 8 6 2.2690 -1.1191 0.0038 9 6 1.8142 -2.5121 0.0090 10 8 0.6265 -2.7649 -0.0753 11 7 2.7109 -3.5136 0.1074 12 6 2.2512 -4.8996 0.2241 13 6 3.4424 -5.8171 0.3252 14 1 4.4420 -5.4086 0.3050 15 6 3.2563 -7.1780 0.4446 16 7 4.2959 -7.9786 0.5333 17 14 1.5274 -7.8846 0.4802 18 1 1.0918 -8.1972 -0.9046 19 1 1.5170 -9.1264 1.2946 20 1 0.5993 -6.8921 1.0790 21 1 -0.3634 0.0871 1.0240 22 1 -0.3634 0.8433 -0.5873 23 1 -0.3633 -0.9302 -0.4366 24 1 4.4601 -1.3156 -0.0076 25 1 3.6606 -3.3161 0.1048 26 1 1.6353 -5.0042 1.1174 27 1 1.6636 -5.1628 -0.6553 28 1 4.1649 -8.9362 0.6169 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000701262710.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 13:43:36 Heat of formation + Delta-G solvation = -3.786409 kcal Electronic energy + Delta-G solvation = -16445.895624 eV Core-core repulsion = 13356.608785 eV Total energy + Delta-G solvation = -3089.286839 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 276.017 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -41.61631 -38.67490 -36.96824 -36.56809 -34.62832 -33.06905 -32.33313 -29.75221 -27.58981 -26.70894 -23.31152 -21.68417 -20.72387 -19.73555 -18.26691 -16.86754 -16.06696 -15.88149 -15.46157 -14.60889 -14.45277 -14.32570 -13.87597 -13.60068 -13.25379 -13.14266 -12.50490 -12.42721 -12.24609 -12.03308 -11.59303 -11.48293 -11.11937 -10.99857 -10.83922 -10.04462 -9.64404 -9.54121 -8.91068 -8.85965 -8.49926 -8.17009 -6.26470 -4.29814 1.22866 1.30779 1.96149 2.14312 2.80905 3.22354 3.29611 3.35764 3.53486 3.81304 4.27842 4.60138 4.83831 5.01624 5.07703 5.08552 5.33472 5.52286 5.67445 6.10235 6.46266 6.59023 6.69959 6.95069 7.01759 7.26876 7.99067 8.36252 8.58641 8.74560 9.31960 10.85240 Molecular weight = 276.02amu Principal moments of inertia in cm(-1) A = 0.030499 B = 0.004260 C = 0.003751 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 917.850059 B = 6571.488417 C = 7461.933258 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.396 5.396 3 C 0.082 3.918 4 Cl -0.005 7.005 5 C -0.095 4.095 6 Cl -0.035 7.035 7 C -0.126 4.126 8 C -0.001 4.001 9 C 0.574 3.426 10 O -0.558 6.558 11 N -0.684 5.684 12 C 0.222 3.778 13 C -0.547 4.547 14 H 0.082 0.918 15 C 0.079 3.921 16 N -0.889 5.889 17 Si 0.876 3.124 18 H -0.272 1.272 19 H -0.283 1.283 20 H -0.261 1.261 21 H 0.082 0.918 22 H 0.084 0.916 23 H 0.120 0.880 24 H 0.166 0.834 25 H 0.401 0.599 26 H 0.029 0.971 27 H 0.026 0.974 28 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.929 19.678 -1.027 20.092 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.071 5.071 3 C -0.061 4.061 4 Cl 0.024 6.976 5 C -0.130 4.130 6 Cl -0.007 7.007 7 C -0.152 4.152 8 C -0.116 4.116 9 C 0.360 3.640 10 O -0.440 6.440 11 N -0.331 5.331 12 C 0.101 3.899 13 C -0.584 4.584 14 H 0.100 0.900 15 C -0.125 4.125 16 N -0.526 5.526 17 Si 0.703 3.297 18 H -0.198 1.198 19 H -0.208 1.208 20 H -0.186 1.186 21 H 0.101 0.899 22 H 0.103 0.897 23 H 0.139 0.861 24 H 0.183 0.817 25 H 0.236 0.764 26 H 0.047 0.953 27 H 0.044 0.956 28 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -5.037 19.458 -1.047 20.126 hybrid contribution -0.297 -0.012 0.046 0.301 sum -5.334 19.446 -1.001 20.189 Atomic orbital electron populations 1.22516 0.74645 1.06665 1.04426 1.43755 1.07437 1.03312 1.52640 1.20518 0.88979 0.82289 1.14335 1.98388 1.89957 1.12031 1.97273 1.19528 0.86258 0.91594 1.15571 1.98334 1.39548 1.65286 1.97503 1.21256 0.95965 0.92232 1.05737 1.20391 0.89093 0.88085 1.14020 1.16816 0.86264 0.82805 0.78162 1.90738 1.16257 1.84535 1.52458 1.45933 1.09337 1.07467 1.70374 1.19600 0.96802 0.76524 0.96985 1.21048 0.92926 0.91240 1.53232 0.90000 1.24777 0.97244 0.96654 0.93822 1.69874 1.29813 1.04290 1.48607 0.86827 0.84813 0.79173 0.78918 1.19789 1.20838 1.18552 0.89928 0.89722 0.86132 0.81660 0.76372 0.95334 0.95629 0.92157 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.64 10.53 59.85 0.63 1.27 15 2 N -0.40 -5.38 3.17 -116.64 -0.37 -5.75 15 3 C 0.08 1.05 7.39 -16.75 -0.12 0.93 15 4 Cl 0.00 -0.05 28.60 -51.86 -1.48 -1.53 15 5 C -0.09 -1.24 6.66 -39.90 -0.27 -1.51 15 6 Cl -0.04 -0.41 29.12 -51.86 -1.51 -1.92 15 7 C -0.13 -1.71 10.34 -39.10 -0.40 -2.12 15 8 C 0.00 -0.01 6.89 -81.94 -0.56 -0.58 15 9 C 0.57 10.60 7.77 -12.91 -0.10 10.50 15 10 O -0.56 -11.59 14.57 5.17 0.08 -11.51 15 11 N -0.68 -13.25 5.53 -62.84 -0.35 -13.60 15 12 C 0.22 5.20 4.50 -5.20 -0.02 5.17 15 13 C -0.55 -14.43 9.83 -34.44 -0.34 -14.77 15 14 H 0.08 2.25 7.84 -52.48 -0.41 1.84 15 15 C 0.08 2.17 5.47 -17.82 -0.10 2.08 15 16 N -0.89 -25.74 13.96 55.43 0.77 -24.97 15 17 Si 0.88 20.69 27.47 -169.99 -4.67 16.02 15 18 H -0.27 -6.35 7.11 56.52 0.40 -5.95 15 19 H -0.28 -6.58 7.11 56.52 0.40 -6.18 15 20 H -0.26 -6.07 6.54 56.52 0.37 -5.70 15 21 H 0.08 0.82 8.14 -51.92 -0.42 0.40 15 22 H 0.08 0.74 7.91 -51.93 -0.41 0.33 15 23 H 0.12 1.56 5.98 -51.93 -0.31 1.25 15 24 H 0.17 1.94 7.45 -52.49 -0.39 1.55 15 25 H 0.40 6.86 7.21 -40.82 -0.29 6.57 15 26 H 0.03 0.70 7.20 -51.93 -0.37 0.32 15 27 H 0.03 0.62 7.57 -51.93 -0.39 0.23 15 28 H 0.27 7.28 8.31 -40.82 -0.34 6.94 15 LS Contribution 280.17 15.07 4.22 4.22 Total: -1.00 -29.71 280.17 -6.77 -36.48 By element: Atomic # 1 Polarization: 3.76 SS G_CDS: -2.17 Total: 1.58 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: -1.29 Total: 0.98 kcal Atomic # 7 Polarization: -44.37 SS G_CDS: 0.06 Total: -44.32 kcal Atomic # 8 Polarization: -11.59 SS G_CDS: 0.08 Total: -11.51 kcal Atomic # 14 Polarization: 20.69 SS G_CDS: -4.67 Total: 16.02 kcal Atomic # 17 Polarization: -0.46 SS G_CDS: -2.99 Total: -3.46 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -29.71 -6.77 -36.48 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000701262710.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.694 kcal (2) G-P(sol) polarization free energy of solvation -29.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.984 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.771 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.481 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.786 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds