Wall clock time and date at job start Thu Apr 9 2020 14:11:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 O 1.42906 * 109.47321 * 2 1 4 4 C 1.42896 * 114.00468 * 180.02562 * 3 2 1 5 5 H 1.09005 * 109.47933 * 310.02501 * 4 3 2 6 6 C 1.53086 * 109.48228 * 190.00222 * 4 3 2 7 7 C 1.53183 * 109.16210 * 297.62032 * 6 4 3 8 8 C 1.53175 * 109.03733 * 303.02242 * 7 6 4 9 9 H 1.08998 * 109.52135 * 297.07036 * 8 7 6 10 10 O 1.42898 * 109.51861 * 176.88186 * 8 7 6 11 11 C 1.53092 * 109.16450 * 56.98221 * 8 7 6 12 12 H 1.08995 * 109.48280 * 62.37038 * 11 8 7 13 13 C 1.50700 * 109.47974 * 182.40797 * 11 8 7 14 14 H 1.07990 * 119.99899 * 359.97438 * 13 11 8 15 15 C 1.37879 * 119.99750 * 179.97438 * 13 11 8 16 16 N 1.31517 * 120.00399 * 0.02562 * 15 13 11 17 17 Si 1.86799 * 119.99789 * 179.97438 * 15 13 11 18 18 H 1.48500 * 109.47327 * 60.00127 * 17 15 13 19 19 H 1.48503 * 109.46980 * 180.02562 * 17 15 13 20 20 H 1.48503 * 109.47287 * 300.00098 * 17 15 13 21 21 O 1.42905 * 109.41234 * 302.38918 * 11 8 7 22 22 H 1.09002 * 109.47153 * 299.99798 * 1 2 3 23 23 H 1.09001 * 109.46832 * 179.97438 * 1 2 3 24 24 H 1.09004 * 109.47261 * 59.99970 * 1 2 3 25 25 H 1.08996 * 109.47853 * 120.00174 * 2 1 3 26 26 H 1.09002 * 109.47153 * 240.00202 * 2 1 3 27 27 H 1.08999 * 109.52591 * 57.53014 * 6 4 3 28 28 H 1.09002 * 109.52131 * 177.65748 * 6 4 3 29 29 H 1.09001 * 109.53547 * 62.88786 * 7 6 4 30 30 H 1.09003 * 109.54332 * 183.06012 * 7 6 4 31 31 H 0.96704 * 114.00041 * 60.00720 * 10 8 7 32 32 H 0.96990 * 120.00397 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 3.4309 1.4602 -0.0006 5 1 3.8458 0.8300 0.7861 6 6 3.8276 2.9173 0.2501 7 6 3.2920 3.7878 -0.8909 8 6 3.8358 3.2578 -2.2212 9 1 4.9222 3.3447 -2.2311 10 8 3.2848 4.0176 -3.2988 11 6 3.4386 1.7875 -2.3765 12 1 2.3522 1.7057 -2.4071 13 6 4.0202 1.2422 -3.6553 14 1 4.6132 1.8800 -4.2938 15 6 3.7950 -0.0710 -4.0101 16 7 3.0724 -0.8476 -3.2327 17 14 4.5153 -0.7468 -5.5956 18 1 5.9955 -0.6352 -5.5540 19 1 4.1300 -2.1730 -5.7459 20 1 3.9925 0.0308 -6.7477 21 8 3.9417 1.0399 -1.2673 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3634 0.5139 -0.8900 25 1 1.8934 -0.5138 0.8899 26 1 1.8933 -0.5138 -0.8900 27 1 3.4017 3.2534 1.1955 28 1 4.9140 2.9971 0.2912 29 1 2.2028 3.7470 -0.9000 30 1 3.6172 4.8182 -0.7470 31 1 3.4932 4.9612 -3.2616 32 1 2.9137 -1.7713 -3.4825 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000034076099.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 14:11:58 Heat of formation + Delta-G solvation = -155.909434 kcal Electronic energy + Delta-G solvation = -15867.315774 eV Core-core repulsion = 13213.660210 eV Total energy + Delta-G solvation = -2653.655563 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 216.119 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -38.90127 -36.45847 -34.80402 -32.82192 -31.76349 -30.36248 -28.64309 -25.48210 -23.01983 -22.01361 -21.57499 -19.28296 -16.72087 -16.59123 -16.18485 -15.44650 -14.88888 -14.33940 -13.80272 -13.37299 -13.14737 -12.92610 -12.62930 -12.12880 -11.80872 -11.48087 -11.20992 -11.05451 -10.87866 -10.81470 -10.59237 -10.39554 -9.93946 -9.73778 -9.43808 -9.04263 -8.68850 -8.44176 -8.05058 -5.96525 -4.04352 3.37310 3.40249 3.44191 4.35794 4.47095 4.86692 5.28697 5.40086 5.48661 5.63757 5.69925 5.73780 5.88965 5.98082 6.03493 6.12133 6.25944 6.27199 6.44319 6.54124 6.66360 6.78093 6.85237 6.94924 7.55004 7.89099 7.97717 8.26551 8.51760 8.82347 9.09555 9.62779 11.11640 Molecular weight = 216.12amu Principal moments of inertia in cm(-1) A = 0.024635 B = 0.013467 C = 0.009973 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1136.298809 B = 2078.638320 C = 2807.027493 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.054 3.946 3 O -0.404 6.404 4 C 0.233 3.767 5 H 0.074 0.926 6 C -0.130 4.130 7 C -0.150 4.150 8 C 0.080 3.920 9 H 0.045 0.955 10 O -0.549 6.549 11 C 0.232 3.768 12 H 0.033 0.967 13 C -0.511 4.511 14 H 0.065 0.935 15 C 0.076 3.924 16 N -0.865 5.865 17 Si 0.895 3.105 18 H -0.277 1.277 19 H -0.287 1.287 20 H -0.276 1.276 21 O -0.363 6.363 22 H 0.048 0.952 23 H 0.062 0.938 24 H 0.060 0.940 25 H 0.028 0.972 26 H 0.091 0.909 27 H 0.066 0.934 28 H 0.076 0.924 29 H 0.073 0.927 30 H 0.050 0.950 31 H 0.355 0.645 32 H 0.259 0.741 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.851 4.614 6.608 8.104 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 C -0.022 4.022 3 O -0.326 6.326 4 C 0.137 3.863 5 H 0.092 0.908 6 C -0.168 4.168 7 C -0.188 4.188 8 C 0.021 3.979 9 H 0.063 0.937 10 O -0.351 6.351 11 C 0.177 3.823 12 H 0.051 0.949 13 C -0.548 4.548 14 H 0.083 0.917 15 C -0.129 4.129 16 N -0.502 5.502 17 Si 0.722 3.278 18 H -0.202 1.202 19 H -0.213 1.213 20 H -0.201 1.201 21 O -0.283 6.283 22 H 0.067 0.933 23 H 0.081 0.919 24 H 0.079 0.921 25 H 0.047 0.953 26 H 0.109 0.891 27 H 0.085 0.915 28 H 0.094 0.906 29 H 0.092 0.908 30 H 0.069 0.931 31 H 0.199 0.801 32 H 0.069 0.931 Dipole moment (debyes) X Y Z Total from point charges -1.147 3.836 6.433 7.577 hybrid contribution 0.633 0.169 -0.381 0.758 sum -0.514 4.004 6.052 7.275 Atomic orbital electron populations 1.21672 0.95180 1.01257 1.01895 1.22479 0.94110 0.84085 1.01556 1.87821 1.22880 1.27296 1.94561 1.23138 0.79816 0.93664 0.89718 0.90838 1.22010 1.00870 0.95174 0.98720 1.22314 1.02297 0.97855 0.96337 1.22707 0.95639 0.95838 0.83765 0.93732 1.86687 1.78114 1.21439 1.48849 1.19492 0.95650 0.82593 0.84590 0.94937 1.20916 1.34709 0.96529 1.02682 0.91719 1.25027 0.94383 0.96952 0.96567 1.69951 1.37106 1.06464 1.36661 0.86635 0.79616 0.77721 0.83803 1.20229 1.21299 1.20148 1.88503 1.67405 1.59237 1.13156 0.93304 0.91930 0.92071 0.95333 0.89110 0.91511 0.90586 0.90810 0.93099 0.80148 0.93103 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.42 10.28 37.16 0.38 -2.04 16 2 C 0.05 1.09 6.53 37.16 0.24 1.33 16 3 O -0.40 -8.71 8.81 -59.04 -0.52 -9.23 16 4 C 0.23 4.91 3.59 37.20 0.13 5.04 16 5 H 0.07 1.42 8.09 -51.93 -0.42 1.00 16 6 C -0.13 -2.29 5.86 -26.59 -0.16 -2.45 16 7 C -0.15 -2.78 5.49 -26.55 -0.15 -2.93 16 8 C 0.08 1.77 3.02 -26.59 -0.08 1.69 16 9 H 0.04 0.98 8.14 -51.93 -0.42 0.56 16 10 O -0.55 -11.75 13.02 -35.23 -0.46 -12.21 16 11 C 0.23 6.21 2.06 -27.84 -0.06 6.15 16 12 H 0.03 0.98 7.56 -51.93 -0.39 0.59 16 13 C -0.51 -14.85 8.51 -34.44 -0.29 -15.14 16 14 H 0.06 1.87 7.74 -52.49 -0.41 1.46 16 15 C 0.08 2.17 5.40 -17.82 -0.10 2.07 16 16 N -0.86 -25.16 12.39 55.43 0.69 -24.47 16 17 Si 0.89 21.84 29.54 -169.99 -5.02 16.82 16 18 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 19 H -0.29 -6.88 7.11 56.52 0.40 -6.48 16 20 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 21 O -0.36 -9.40 9.33 -59.04 -0.55 -9.95 16 22 H 0.05 0.74 8.14 -51.93 -0.42 0.31 16 23 H 0.06 0.92 8.14 -51.93 -0.42 0.50 16 24 H 0.06 1.11 8.14 -51.93 -0.42 0.68 16 25 H 0.03 0.52 8.14 -51.93 -0.42 0.09 16 26 H 0.09 2.18 7.43 -51.93 -0.39 1.80 16 27 H 0.07 1.02 8.14 -51.93 -0.42 0.60 16 28 H 0.08 1.24 8.14 -51.93 -0.42 0.82 16 29 H 0.07 1.47 7.82 -51.93 -0.41 1.07 16 30 H 0.05 0.78 8.14 -51.93 -0.42 0.36 16 31 H 0.35 5.44 9.08 45.56 0.41 5.86 16 32 H 0.26 7.16 8.31 -40.82 -0.34 6.82 16 LS Contribution 266.33 15.07 4.01 4.01 Total: -1.00 -31.78 266.33 -6.03 -37.82 By element: Atomic # 1 Polarization: 7.59 SS G_CDS: -4.11 Total: 3.48 kcal Atomic # 6 Polarization: -6.20 SS G_CDS: -0.07 Total: -6.27 kcal Atomic # 7 Polarization: -25.16 SS G_CDS: 0.69 Total: -24.47 kcal Atomic # 8 Polarization: -29.86 SS G_CDS: -1.53 Total: -31.39 kcal Atomic # 14 Polarization: 21.84 SS G_CDS: -5.02 Total: 16.82 kcal Total LS contribution 4.01 Total: 4.01 kcal Total: -31.78 -6.03 -37.82 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000034076099.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.092 kcal (2) G-P(sol) polarization free energy of solvation -31.783 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -149.875 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.034 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.817 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.909 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds