Wall clock time and date at job start Thu Apr 9 2020 14:45:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13593 * 1 3 3 C 1.47208 * 179.97438 * 2 1 4 4 N 1.46498 * 109.47277 * 104.14534 * 3 2 1 5 5 C 1.37097 * 120.00182 * 264.23327 * 4 3 2 6 6 H 1.07998 * 120.00262 * 197.72257 * 5 4 3 7 7 C 1.38955 * 119.99904 * 17.71886 * 5 4 3 8 8 N 1.31416 * 120.00041 * 21.41685 * 7 5 4 9 9 Si 1.86795 * 120.00012 * 201.42183 * 7 5 4 10 10 H 1.48501 * 109.47163 * 359.97438 * 9 7 5 11 11 H 1.48500 * 109.47467 * 119.99679 * 9 7 5 12 12 H 1.48502 * 109.47017 * 239.99946 * 9 7 5 13 13 C 1.34776 * 119.99936 * 84.22850 * 4 3 2 14 14 O 1.21294 * 119.99890 * 180.02562 * 13 4 3 15 15 C 1.50706 * 119.99836 * 0.02562 * 13 4 3 16 16 C 1.50701 * 109.46743 * 179.97438 * 15 13 4 17 17 C 1.38282 * 119.97339 * 270.02023 * 16 15 13 18 18 C 1.38247 * 120.11313 * 180.02562 * 17 16 15 19 19 C 1.38168 * 120.05502 * 359.67666 * 18 17 16 20 20 C 1.38709 * 119.94119 * 0.57376 * 19 18 17 21 21 O 1.35899 * 120.05698 * 179.71977 * 20 19 18 22 22 C 1.38129 * 119.97239 * 89.99716 * 16 15 13 23 23 H 1.08997 * 109.46754 * 344.14291 * 3 2 1 24 24 H 1.08999 * 109.46519 * 224.14920 * 3 2 1 25 25 H 0.97000 * 120.00110 * 180.02562 * 8 7 5 26 26 H 1.08992 * 109.47321 * 59.99536 * 15 13 4 27 27 H 1.09000 * 109.46978 * 299.99280 * 15 13 4 28 28 H 1.07999 * 119.94636 * 359.97438 * 17 16 15 29 29 H 1.07998 * 119.97294 * 179.97438 * 18 17 16 30 30 H 1.07994 * 120.03048 * 180.30106 * 19 18 17 31 31 H 0.96696 * 114.00452 * 269.73049 * 21 20 19 32 32 H 1.08004 * 120.02432 * 0.02562 * 22 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0962 0.3384 -1.3393 5 6 3.4377 -0.6587 -2.2161 6 1 4.0539 -0.4354 -3.0745 7 6 2.9909 -1.9566 -2.0005 8 7 1.9374 -2.1719 -1.2449 9 14 3.8878 -3.3955 -2.7843 10 1 5.0330 -2.8893 -3.5827 11 1 4.3878 -4.3051 -1.7223 12 1 2.9552 -4.1359 -3.6717 13 6 3.2096 1.6294 -1.7095 14 8 3.6134 1.9090 -2.8186 15 6 2.8347 2.7254 -0.7455 16 6 3.0525 4.0656 -1.3993 17 6 4.2761 4.6995 -1.2849 18 6 4.4789 5.9292 -1.8831 19 6 3.4609 6.5249 -2.6027 20 6 2.2309 5.8935 -2.7147 21 8 1.2262 6.4800 -3.4171 22 6 2.0298 4.6596 -2.1129 23 1 2.9717 -0.9877 0.2808 24 1 2.9709 0.7382 0.7158 25 1 1.6257 -3.0780 -1.0941 26 1 3.4555 2.6520 0.1474 27 1 1.7857 2.6222 -0.4682 28 1 5.0745 4.2335 -0.7265 29 1 5.4353 6.4225 -1.7919 30 1 3.6213 7.4833 -3.0739 31 1 0.6572 7.0534 -2.8856 32 1 1.0742 4.1641 -2.2020 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000042417954.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 14:45:20 Heat of formation + Delta-G solvation = -13.904443 kcal Electronic energy + Delta-G solvation = -18668.462068 eV Core-core repulsion = 15594.975449 eV Total energy + Delta-G solvation = -3073.486618 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 260.095 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -39.74589 -38.66688 -36.65075 -35.72679 -34.35405 -32.40488 -31.69364 -29.67670 -27.78580 -27.20608 -24.56551 -22.39412 -21.62703 -19.31044 -18.01152 -17.66892 -16.53557 -16.25855 -16.17586 -15.57341 -15.03982 -14.65145 -14.20272 -13.84937 -13.51313 -13.03932 -12.93336 -12.76620 -12.26576 -11.92789 -11.82269 -11.71227 -11.45572 -11.28988 -11.20583 -11.08540 -10.59593 -10.40935 -10.35453 -10.24481 -9.28009 -8.80326 -8.52603 -8.30102 -8.05646 -6.51913 -4.00931 1.46426 1.55920 3.07909 3.21932 3.28156 3.52636 3.75774 3.84271 3.95076 4.12343 4.30889 4.82080 4.88740 5.01596 5.06322 5.19176 5.30122 5.52201 5.56885 5.67999 5.78412 5.85941 6.04840 6.12445 6.22905 6.48129 6.57561 6.60004 6.83204 7.01457 7.46338 7.77265 7.88943 8.27114 8.70849 8.99388 9.18108 9.72457 10.54381 Molecular weight = 260.09amu Principal moments of inertia in cm(-1) A = 0.026874 B = 0.005443 C = 0.005051 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1041.638767 B = 5142.643507 C = 5542.616742 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.473 5.473 2 C 0.245 3.755 3 C 0.220 3.780 4 N -0.445 5.445 5 C -0.312 4.312 6 H 0.109 0.891 7 C 0.031 3.969 8 N -0.878 5.878 9 Si 0.926 3.074 10 H -0.267 1.267 11 H -0.279 1.279 12 H -0.283 1.283 13 C 0.459 3.541 14 O -0.563 6.563 15 C -0.104 4.104 16 C -0.029 4.029 17 C -0.114 4.114 18 C -0.106 4.106 19 C -0.154 4.154 20 C 0.100 3.900 21 O -0.500 6.500 22 C -0.130 4.130 23 H 0.128 0.872 24 H 0.084 0.916 25 H 0.273 0.727 26 H 0.094 0.906 27 H 0.089 0.911 28 H 0.123 0.877 29 H 0.123 0.877 30 H 0.122 0.878 31 H 0.385 0.615 32 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.014 11.589 5.694 13.522 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.153 5.153 2 C -0.073 4.073 3 C 0.093 3.907 4 N -0.166 5.166 5 C -0.439 4.439 6 H 0.126 0.874 7 C -0.172 4.172 8 N -0.517 5.517 9 Si 0.753 3.247 10 H -0.191 1.191 11 H -0.204 1.204 12 H -0.209 1.209 13 C 0.247 3.753 14 O -0.444 6.444 15 C -0.145 4.145 16 C -0.030 4.030 17 C -0.132 4.132 18 C -0.124 4.124 19 C -0.173 4.173 20 C 0.056 3.944 21 O -0.309 6.309 22 C -0.148 4.148 23 H 0.146 0.854 24 H 0.102 0.898 25 H 0.083 0.917 26 H 0.113 0.887 27 H 0.107 0.893 28 H 0.141 0.859 29 H 0.141 0.859 30 H 0.140 0.860 31 H 0.239 0.761 32 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 2.694 11.234 4.700 12.472 hybrid contribution 0.328 -0.787 -0.037 0.854 sum 3.022 10.446 4.663 11.832 Atomic orbital electron populations 1.80899 1.13619 1.11719 1.09035 1.29343 0.95400 0.90546 0.92045 1.18757 0.81598 1.04096 0.86277 1.43659 1.56900 1.04698 1.11343 1.19762 1.29866 0.85984 1.08275 0.87367 1.25273 0.95019 0.99247 0.97693 1.69866 1.19964 1.22476 1.39441 0.85860 0.79602 0.80420 0.78853 1.19106 1.20442 1.20911 1.19950 0.84085 0.83027 0.88230 1.90587 1.49547 1.82199 1.22073 1.20754 1.03331 0.91488 0.98889 1.19275 0.93301 0.94200 0.96224 1.21008 0.96436 0.95087 1.00673 1.20917 0.98451 0.95601 0.97421 1.21284 0.93766 1.00964 1.01260 1.18394 0.88508 0.92833 0.94643 1.84853 1.43094 1.65454 1.37539 1.21275 1.00347 0.95552 0.97673 0.85441 0.89792 0.91689 0.88729 0.89284 0.85853 0.85876 0.85964 0.76059 0.85763 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.47 -11.05 18.54 42.15 0.78 -10.27 16 2 C 0.25 5.28 12.95 -20.76 -0.27 5.01 16 3 C 0.22 4.21 4.91 -6.83 -0.03 4.18 16 4 N -0.45 -10.19 2.60 -117.93 -0.31 -10.49 16 5 C -0.31 -7.99 9.32 -14.93 -0.14 -8.13 16 6 H 0.11 2.96 7.39 -52.49 -0.39 2.57 16 7 C 0.03 0.76 4.87 -17.46 -0.08 0.68 16 8 N -0.88 -22.02 9.48 55.50 0.53 -21.49 16 9 Si 0.93 19.58 29.60 -169.99 -5.03 14.55 16 10 H -0.27 -5.67 7.11 56.52 0.40 -5.27 16 11 H -0.28 -5.70 7.11 56.52 0.40 -5.30 16 12 H -0.28 -6.16 7.11 56.52 0.40 -5.76 16 13 C 0.46 10.24 7.56 -10.98 -0.08 10.16 16 14 O -0.56 -14.84 15.68 5.55 0.09 -14.75 16 15 C -0.10 -1.75 4.43 -29.03 -0.13 -1.88 16 16 C -0.03 -0.49 4.37 -104.65 -0.46 -0.95 16 17 C -0.11 -1.67 9.70 -39.56 -0.38 -2.06 16 18 C -0.11 -1.39 10.04 -39.60 -0.40 -1.79 16 19 C -0.15 -2.09 9.99 -39.43 -0.39 -2.48 16 20 C 0.10 1.52 6.70 -39.22 -0.26 1.26 16 21 O -0.50 -6.78 13.50 -19.42 -0.26 -7.04 16 22 C -0.13 -2.18 9.64 -39.43 -0.38 -2.56 16 23 H 0.13 2.50 6.46 -51.93 -0.34 2.17 16 24 H 0.08 1.18 6.68 -51.93 -0.35 0.83 16 25 H 0.27 6.61 8.31 -40.82 -0.34 6.27 16 26 H 0.09 1.25 7.36 -51.93 -0.38 0.86 16 27 H 0.09 1.45 7.45 -51.93 -0.39 1.07 16 28 H 0.12 1.58 8.06 -52.49 -0.42 1.15 16 29 H 0.12 1.25 8.06 -52.49 -0.42 0.83 16 30 H 0.12 1.37 8.06 -52.49 -0.42 0.95 16 31 H 0.38 3.04 9.06 45.56 0.41 3.46 16 32 H 0.12 2.10 8.06 -52.48 -0.42 1.68 16 LS Contribution 290.16 15.07 4.37 4.37 Total: -1.00 -33.06 290.16 -5.10 -38.16 By element: Atomic # 1 Polarization: 7.77 SS G_CDS: -2.25 Total: 5.51 kcal Atomic # 6 Polarization: 4.46 SS G_CDS: -3.01 Total: 1.44 kcal Atomic # 7 Polarization: -43.25 SS G_CDS: 1.00 Total: -42.25 kcal Atomic # 8 Polarization: -21.61 SS G_CDS: -0.18 Total: -21.79 kcal Atomic # 14 Polarization: 19.58 SS G_CDS: -5.03 Total: 14.55 kcal Total LS contribution 4.37 Total: 4.37 kcal Total: -33.06 -5.10 -38.16 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000042417954.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.260 kcal (2) G-P(sol) polarization free energy of solvation -33.064 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.804 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.100 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.165 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.904 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds