Wall clock time and date at job start Thu Apr 9 2020 15:10:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38291 * 119.93812 * 2 1 4 4 C 1.38212 * 120.03727 * 180.02562 * 3 2 1 5 5 Cl 1.73606 * 120.03422 * 180.02562 * 4 3 2 6 6 C 1.38852 * 119.92766 * 359.97438 * 4 3 2 7 7 O 1.35927 * 120.05769 * 179.97438 * 6 4 3 8 8 C 1.38661 * 119.88098 * 359.97438 * 6 4 3 9 9 C 1.50697 * 120.02256 * 179.97438 * 8 6 4 10 10 H 1.09002 * 109.47015 * 0.02562 * 9 8 6 11 11 C 1.52998 * 109.47484 * 240.00398 * 9 8 6 12 12 C 1.50704 * 109.47123 * 120.00441 * 9 8 6 13 13 H 1.07997 * 119.99567 * 5.60854 * 12 9 8 14 14 C 1.37881 * 119.99950 * 185.61324 * 12 9 8 15 15 N 1.31506 * 120.00122 * 197.60241 * 14 12 9 16 16 Si 1.86800 * 119.99926 * 17.60898 * 14 12 9 17 17 H 1.48500 * 109.47095 * 179.97438 * 16 14 12 18 18 H 1.48503 * 109.47140 * 299.99501 * 16 14 12 19 19 H 1.48496 * 109.47701 * 59.99389 * 16 14 12 20 20 C 1.38194 * 119.95627 * 0.25790 * 8 6 4 21 21 H 1.08995 * 109.47359 * 90.00698 * 1 2 3 22 22 H 1.09003 * 109.46897 * 210.00479 * 1 2 3 23 23 H 1.09002 * 109.47280 * 329.99882 * 1 2 3 24 24 H 1.07996 * 119.97968 * 0.03583 * 3 2 1 25 25 H 0.96699 * 113.99848 * 270.01869 * 7 6 4 26 26 H 1.09002 * 109.46901 * 66.17000 * 11 9 8 27 27 H 1.09001 * 109.47574 * 186.17618 * 11 9 8 28 28 H 1.08997 * 109.47109 * 306.17654 * 11 9 8 29 29 H 0.97006 * 119.99591 * 354.79742 * 15 14 12 30 30 H 1.07998 * 119.96145 * 179.71897 * 20 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1972 1.1984 0.0000 4 6 3.5793 1.2008 -0.0005 5 17 4.4456 2.7052 0.0001 6 6 4.2741 -0.0014 -0.0005 7 8 5.6334 -0.0021 -0.0016 8 6 3.5789 -1.2011 0.0005 9 6 4.3297 -2.5077 0.0000 10 1 5.4018 -2.3107 -0.0009 11 6 3.9572 -3.3096 -1.2487 12 6 3.9654 -3.2970 1.2310 13 1 3.1947 -2.9356 1.8956 14 6 4.6161 -4.4805 1.5087 15 7 4.0908 -5.3361 2.3580 16 14 6.2441 -4.8683 0.6787 17 1 6.7343 -6.1906 1.1441 18 1 6.0536 -4.9007 -0.7937 19 1 7.2387 -3.8219 1.0262 20 6 2.1969 -1.1979 -0.0038 21 1 -0.3634 -0.0001 -1.0276 22 1 -0.3633 -0.8900 0.5139 23 1 -0.3634 0.8900 0.5139 24 1 1.6558 2.1329 0.0006 25 1 6.0260 -0.0025 -0.8853 26 1 4.3189 -2.7895 -2.1357 27 1 4.4137 -4.2979 -1.1954 28 1 2.8735 -3.4124 -1.3045 29 1 3.2854 -5.1028 2.8458 30 1 1.6554 -2.1322 -0.0075 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259747720.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 15:10:38 Heat of formation + Delta-G solvation = -43.913056 kcal Electronic energy + Delta-G solvation = -15050.894359 eV Core-core repulsion = 12450.519112 eV Total energy + Delta-G solvation = -2600.375247 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 240.066 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -39.67299 -36.57042 -36.29478 -34.61701 -31.87564 -31.11188 -28.87300 -26.11627 -24.78916 -22.99313 -21.35917 -19.36805 -17.98408 -17.43809 -15.88964 -15.43943 -14.84170 -14.12606 -13.81369 -13.39947 -13.27004 -12.70429 -12.41775 -12.39605 -12.14541 -11.78856 -11.70268 -11.34324 -10.96052 -10.76903 -10.59898 -10.45425 -10.06131 -9.80123 -9.59870 -8.97864 -8.27609 -8.17957 -7.97292 -6.46668 -4.08809 1.48231 1.67396 2.39633 3.36599 3.45382 3.60722 3.92702 4.47577 4.54478 5.05570 5.22197 5.27019 5.45602 5.64759 5.72401 5.78979 5.99650 6.07459 6.23452 6.35096 6.41980 6.60078 6.67272 6.79995 6.86132 7.10795 7.22956 7.47510 7.99682 8.06815 8.35582 8.87216 9.58377 10.92064 Molecular weight = 240.07amu Principal moments of inertia in cm(-1) A = 0.026210 B = 0.008463 C = 0.007006 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1068.022886 B = 3307.709503 C = 3995.698544 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C -0.090 4.090 3 C -0.125 4.125 4 C -0.057 4.057 5 Cl -0.079 7.079 6 C 0.095 3.905 7 O -0.480 6.480 8 C -0.033 4.033 9 C 0.046 3.954 10 H 0.040 0.960 11 C -0.145 4.145 12 C -0.590 4.590 13 H 0.057 0.943 14 C 0.032 3.968 15 N -0.905 5.905 16 Si 1.045 2.955 17 H -0.286 1.286 18 H -0.274 1.274 19 H -0.281 1.281 20 C -0.092 4.092 21 H 0.068 0.932 22 H 0.068 0.932 23 H 0.063 0.937 24 H 0.126 0.874 25 H 0.381 0.619 26 H 0.022 0.978 27 H 0.058 0.942 28 H 0.045 0.955 29 H 0.267 0.733 30 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.996 11.509 -8.029 14.349 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C -0.090 4.090 3 C -0.144 4.144 4 C -0.084 4.084 5 Cl -0.050 7.050 6 C 0.049 3.951 7 O -0.288 6.288 8 C -0.034 4.034 9 C 0.027 3.973 10 H 0.058 0.942 11 C -0.203 4.203 12 C -0.628 4.628 13 H 0.075 0.925 14 C -0.173 4.173 15 N -0.539 5.539 16 Si 0.873 3.127 17 H -0.212 1.212 18 H -0.201 1.201 19 H -0.207 1.207 20 C -0.110 4.110 21 H 0.086 0.914 22 H 0.087 0.913 23 H 0.082 0.918 24 H 0.144 0.856 25 H 0.236 0.764 26 H 0.041 0.959 27 H 0.077 0.923 28 H 0.064 0.936 29 H 0.077 0.923 30 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -1.823 10.460 -7.550 13.028 hybrid contribution -1.027 1.435 -0.175 1.773 sum -2.850 11.895 -7.725 14.467 Atomic orbital electron populations 1.20730 0.90982 1.02721 1.02063 1.19832 0.96069 0.92480 1.00613 1.20581 0.91230 0.98264 1.04312 1.21292 0.92637 0.85988 1.08496 1.98321 1.77382 1.32178 1.97124 1.18091 0.83469 0.90168 1.03349 1.84892 1.15314 1.96086 1.32547 1.20627 0.93959 0.95299 0.93485 1.18155 0.95346 0.88033 0.95811 0.94189 1.22270 1.00876 1.00622 0.96524 1.21888 1.23708 1.08582 1.08598 0.92459 1.25762 1.02132 0.92038 0.97364 1.70870 1.22398 1.33565 1.27033 0.84046 0.76011 0.76343 0.76268 1.21228 1.20064 1.20717 1.20988 0.93607 0.97519 0.98916 0.91355 0.91291 0.91812 0.85594 0.76415 0.95892 0.92280 0.93591 0.92256 0.85004 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.32 10.01 36.01 0.36 -0.96 16 2 C -0.09 -1.43 5.88 -104.60 -0.62 -2.04 16 3 C -0.13 -1.95 9.48 -39.57 -0.38 -2.32 16 4 C -0.06 -0.97 6.33 -39.36 -0.25 -1.22 16 5 Cl -0.08 -1.18 28.51 -51.86 -1.48 -2.66 16 6 C 0.09 1.82 6.67 -39.20 -0.26 1.55 16 7 O -0.48 -8.74 11.73 -19.51 -0.23 -8.97 16 8 C -0.03 -0.68 4.76 -104.48 -0.50 -1.18 16 9 C 0.05 1.06 2.03 -92.92 -0.19 0.87 16 10 H 0.04 0.94 5.65 -51.93 -0.29 0.65 16 11 C -0.15 -3.05 8.77 37.16 0.33 -2.72 16 12 C -0.59 -16.27 8.54 -34.44 -0.29 -16.57 16 13 H 0.06 1.72 7.78 -52.49 -0.41 1.31 16 14 C 0.03 0.91 5.29 -17.82 -0.09 0.82 16 15 N -0.90 -27.47 13.69 55.43 0.76 -26.71 16 16 Si 1.04 24.95 26.29 -169.99 -4.47 20.48 16 17 H -0.29 -6.91 7.11 56.52 0.40 -6.50 16 18 H -0.27 -5.95 5.76 56.52 0.33 -5.62 16 19 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 20 C -0.09 -1.74 8.24 -39.60 -0.33 -2.07 16 21 H 0.07 0.72 8.14 -51.93 -0.42 0.30 16 22 H 0.07 0.83 8.09 -51.93 -0.42 0.41 16 23 H 0.06 0.67 8.08 -51.93 -0.42 0.25 16 24 H 0.13 1.64 8.06 -52.49 -0.42 1.21 16 25 H 0.38 5.06 9.06 45.56 0.41 5.47 16 26 H 0.02 0.41 8.14 -51.93 -0.42 -0.02 16 27 H 0.06 1.30 4.89 -51.93 -0.25 1.04 16 28 H 0.04 0.93 7.17 -51.93 -0.37 0.55 16 29 H 0.27 8.09 8.73 -40.82 -0.36 7.74 16 30 H 0.13 2.53 7.53 -52.49 -0.40 2.13 16 LS Contribution 267.52 15.07 4.03 4.03 Total: -1.00 -30.61 267.52 -6.25 -36.85 By element: Atomic # 1 Polarization: 5.46 SS G_CDS: -2.65 Total: 2.81 kcal Atomic # 6 Polarization: -23.63 SS G_CDS: -2.21 Total: -25.84 kcal Atomic # 7 Polarization: -27.47 SS G_CDS: 0.76 Total: -26.71 kcal Atomic # 8 Polarization: -8.74 SS G_CDS: -0.23 Total: -8.97 kcal Atomic # 14 Polarization: 24.95 SS G_CDS: -4.47 Total: 20.48 kcal Atomic # 17 Polarization: -1.18 SS G_CDS: -1.48 Total: -2.66 kcal Total LS contribution 4.03 Total: 4.03 kcal Total: -30.61 -6.25 -36.85 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259747720.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.058 kcal (2) G-P(sol) polarization free energy of solvation -30.608 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.666 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.247 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.855 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.913 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds