Wall clock time and date at job start Thu Apr 9 2020 15:10:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.38238 * 120.00972 * 2 1 4 4 C 1.38214 * 120.01500 * 180.02562 * 3 2 1 5 5 C 1.50696 * 119.98927 * 179.97438 * 4 3 2 6 6 C 1.53002 * 109.47308 * 270.02543 * 5 4 3 7 7 O 1.42899 * 109.46954 * 30.01869 * 5 4 3 8 8 C 1.50696 * 109.47684 * 150.02252 * 5 4 3 9 9 H 1.08009 * 119.99905 * 359.97438 * 8 5 4 10 10 C 1.37874 * 120.00527 * 180.02562 * 8 5 4 11 11 N 1.31520 * 119.99923 * 359.97438 * 10 8 5 12 12 Si 1.86805 * 120.00354 * 179.97438 * 10 8 5 13 13 H 1.48501 * 109.46871 * 89.99552 * 12 10 8 14 14 H 1.48495 * 109.47191 * 209.99553 * 12 10 8 15 15 H 1.48499 * 109.46771 * 329.99999 * 12 10 8 16 16 C 1.38270 * 120.02795 * 359.97438 * 4 3 2 17 17 C 1.38188 * 120.01173 * 359.97438 * 16 4 3 18 18 C 1.38337 * 120.00689 * 180.02562 * 2 1 3 19 19 Cl 1.73595 * 120.01149 * 0.25153 * 18 2 1 20 20 H 1.08992 * 109.47250 * 270.00058 * 1 2 3 21 21 H 1.09005 * 109.46944 * 29.99861 * 1 2 3 22 22 H 1.09003 * 109.47196 * 149.99768 * 1 2 3 23 23 H 1.08000 * 119.99350 * 0.04257 * 3 2 1 24 24 H 1.09003 * 109.47385 * 59.99358 * 6 5 4 25 25 H 1.08999 * 109.47653 * 179.97438 * 6 5 4 26 26 H 1.09003 * 109.46863 * 299.99419 * 6 5 4 27 27 H 0.96702 * 114.00103 * 60.00431 * 7 5 4 28 28 H 0.97000 * 120.00088 * 180.02562 * 11 10 8 29 29 H 1.08002 * 119.99309 * 179.97438 * 16 4 3 30 30 H 1.07996 * 120.01013 * 179.97438 * 17 16 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.1983 1.1971 0.0000 4 6 3.5805 1.1972 -0.0005 5 6 4.3336 2.5025 -0.0011 6 6 4.5874 2.9443 -1.4438 7 8 3.5615 3.4982 0.6730 8 6 5.6509 2.3228 0.7083 9 1 5.9162 1.3597 1.1190 10 6 6.5172 3.3880 0.8341 11 7 6.1941 4.5609 0.3344 12 14 8.1499 3.1654 1.7141 13 1 9.1885 2.7567 0.7345 14 1 8.5473 4.4464 2.3514 15 1 8.0116 2.1161 2.7557 16 6 4.2725 0.0001 -0.0005 17 6 3.5825 -1.1971 0.0005 18 6 2.1988 -1.1980 -0.0005 19 17 1.3313 -2.7016 -0.0078 20 1 -0.3633 0.0000 1.0276 21 1 -0.3633 0.8900 -0.5138 22 1 -0.3634 -0.8900 -0.5139 23 1 1.6584 2.1324 0.0007 24 1 3.6346 3.0742 -1.9570 25 1 5.1317 3.8886 -1.4443 26 1 5.1764 2.1848 -1.9581 27 1 3.3622 3.2841 1.5947 28 1 6.8037 5.3103 0.4226 29 1 5.3525 0.0009 -0.0014 30 1 4.1231 -2.1321 0.0001 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259811537.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 15:10:53 Heat of formation + Delta-G solvation = -42.862114 kcal Electronic energy + Delta-G solvation = -15075.550079 eV Core-core repulsion = 12475.220405 eV Total energy + Delta-G solvation = -2600.329674 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 240.066 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -39.19855 -36.58431 -35.59539 -32.58468 -32.21119 -30.61634 -28.30258 -26.58397 -25.19202 -22.51467 -21.39303 -19.32038 -17.12714 -16.35324 -15.27606 -14.98997 -14.71211 -13.84998 -13.76186 -13.35520 -12.75367 -12.61903 -12.21011 -12.11868 -11.79241 -11.25068 -11.16588 -11.05570 -11.00517 -10.81435 -10.72934 -10.38435 -10.24220 -10.14214 -9.15253 -8.60108 -8.44261 -8.25440 -7.83820 -6.05764 -4.26754 1.73117 1.82393 2.48823 3.22917 3.31016 3.33125 4.19268 4.33063 5.15442 5.16918 5.20928 5.52264 5.78258 5.79696 5.90620 6.02777 6.06768 6.10109 6.33415 6.54190 6.77134 6.81480 6.88473 7.03413 7.21817 7.40807 7.51559 7.69202 7.91617 8.17344 8.73262 9.26214 9.50207 10.94000 Molecular weight = 240.07amu Principal moments of inertia in cm(-1) A = 0.037704 B = 0.006874 C = 0.006165 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 742.450906 B = 4072.373591 C = 4540.430209 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 C -0.088 4.088 3 C -0.109 4.109 4 C -0.066 4.066 5 C 0.281 3.719 6 C -0.118 4.118 7 O -0.557 6.557 8 C -0.563 4.563 9 H 0.063 0.937 10 C 0.082 3.918 11 N -0.855 5.855 12 Si 0.889 3.111 13 H -0.279 1.279 14 H -0.285 1.285 15 H -0.273 1.273 16 C -0.097 4.097 17 C -0.118 4.118 18 C -0.054 4.054 19 Cl -0.094 7.094 20 H 0.068 0.932 21 H 0.066 0.934 22 H 0.066 0.934 23 H 0.131 0.869 24 H 0.016 0.984 25 H 0.093 0.907 26 H 0.040 0.960 27 H 0.350 0.650 28 H 0.261 0.739 29 H 0.140 0.860 30 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.115 -8.562 -0.710 11.155 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C -0.089 4.089 3 C -0.127 4.127 4 C -0.066 4.066 5 C 0.242 3.758 6 C -0.175 4.175 7 O -0.360 6.360 8 C -0.601 4.601 9 H 0.081 0.919 10 C -0.124 4.124 11 N -0.490 5.490 12 Si 0.716 3.284 13 H -0.205 1.205 14 H -0.211 1.211 15 H -0.198 1.198 16 C -0.115 4.115 17 C -0.137 4.137 18 C -0.080 4.080 19 Cl -0.066 7.066 20 H 0.087 0.913 21 H 0.085 0.915 22 H 0.085 0.915 23 H 0.149 0.851 24 H 0.035 0.965 25 H 0.112 0.888 26 H 0.059 0.941 27 H 0.194 0.806 28 H 0.071 0.929 29 H 0.157 0.843 30 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges -7.098 -8.199 -1.343 10.928 hybrid contribution 0.903 -0.620 1.055 1.521 sum -6.195 -8.819 -0.287 10.782 Atomic orbital electron populations 1.20785 0.91164 1.02732 1.02260 1.19675 0.96063 0.91609 1.01521 1.20966 0.94337 0.96617 1.00783 1.21527 0.93505 0.98561 0.93018 1.17713 0.87249 0.79351 0.91528 1.21589 0.98632 1.03604 0.93724 1.86508 1.74823 1.48281 1.26351 1.21640 1.02457 0.97028 1.38963 0.91941 1.24996 0.97744 0.95086 0.94569 1.69995 1.35605 1.00569 1.42871 0.86668 0.84013 0.77712 0.80016 1.20493 1.21089 1.19802 1.21279 1.01104 0.90627 0.98505 1.21017 0.91711 0.99029 1.01933 1.20657 0.92191 0.85489 1.09672 1.98299 1.77447 1.33534 1.97287 0.91327 0.91486 0.91463 0.85139 0.96468 0.88811 0.94054 0.80597 0.92922 0.84276 0.85942 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.49 9.62 36.00 0.35 -1.14 16 2 C -0.09 -1.45 5.88 -104.59 -0.62 -2.07 16 3 C -0.11 -2.01 9.00 -39.59 -0.36 -2.37 16 4 C -0.07 -1.35 4.80 -104.62 -0.50 -1.85 16 5 C 0.28 6.67 0.82 -92.93 -0.08 6.60 16 6 C -0.12 -2.81 8.60 37.16 0.32 -2.49 16 7 O -0.56 -13.52 11.36 -35.23 -0.40 -13.92 16 8 C -0.56 -14.39 7.58 -34.44 -0.26 -14.66 16 9 H 0.06 1.56 6.03 -52.48 -0.32 1.25 16 10 C 0.08 2.16 5.24 -17.82 -0.09 2.06 16 11 N -0.85 -23.48 10.87 55.43 0.60 -22.88 16 12 Si 0.89 20.24 29.54 -169.99 -5.02 15.22 16 13 H -0.28 -6.31 7.11 56.52 0.40 -5.90 16 14 H -0.29 -6.53 7.11 56.52 0.40 -6.13 16 15 H -0.27 -6.18 7.11 56.52 0.40 -5.78 16 16 C -0.10 -1.87 8.88 -39.59 -0.35 -2.22 16 17 C -0.12 -2.00 9.83 -39.55 -0.39 -2.39 16 18 C -0.05 -0.88 6.31 -39.49 -0.25 -1.13 16 19 Cl -0.09 -1.33 27.29 -51.86 -1.42 -2.74 16 20 H 0.07 0.84 8.14 -51.93 -0.42 0.41 16 21 H 0.07 0.81 8.09 -51.93 -0.42 0.39 16 22 H 0.07 0.83 6.90 -51.93 -0.36 0.48 16 23 H 0.13 2.36 7.48 -52.49 -0.39 1.97 16 24 H 0.02 0.37 8.14 -51.93 -0.42 -0.06 16 25 H 0.09 2.47 6.07 -51.93 -0.32 2.15 16 26 H 0.04 0.93 8.14 -51.93 -0.42 0.50 16 27 H 0.35 7.67 9.03 45.56 0.41 8.08 16 28 H 0.26 6.86 8.31 -40.82 -0.34 6.52 16 29 H 0.14 2.71 6.43 -52.49 -0.34 2.37 16 30 H 0.12 1.79 8.06 -52.49 -0.42 1.37 16 LS Contribution 267.78 15.07 4.04 4.04 Total: -1.00 -27.34 267.78 -6.98 -34.32 By element: Atomic # 1 Polarization: 10.19 SS G_CDS: -2.55 Total: 7.63 kcal Atomic # 6 Polarization: -19.43 SS G_CDS: -2.23 Total: -21.66 kcal Atomic # 7 Polarization: -23.48 SS G_CDS: 0.60 Total: -22.88 kcal Atomic # 8 Polarization: -13.52 SS G_CDS: -0.40 Total: -13.92 kcal Atomic # 14 Polarization: 20.24 SS G_CDS: -5.02 Total: 15.22 kcal Atomic # 17 Polarization: -1.33 SS G_CDS: -1.42 Total: -2.74 kcal Total LS contribution 4.04 Total: 4.04 kcal Total: -27.34 -6.98 -34.32 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259811537.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.540 kcal (2) G-P(sol) polarization free energy of solvation -27.341 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.881 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.981 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.322 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.862 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds