Wall clock time and date at job start Thu Apr 9 2020 15:11:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.38159 * 119.97628 * 2 1 4 4 C 1.38706 * 119.95606 * 179.97438 * 3 2 1 5 5 O 1.35923 * 120.04363 * 179.97438 * 4 3 2 6 6 C 1.38735 * 119.91395 * 0.02562 * 4 3 2 7 7 C 1.50706 * 120.02095 * 179.97438 * 6 4 3 8 8 H 1.08997 * 109.47135 * 0.02562 * 7 6 4 9 9 C 1.53005 * 109.46755 * 120.00489 * 7 6 4 10 10 C 1.50696 * 109.47266 * 240.00457 * 7 6 4 11 11 H 1.08004 * 120.00277 * 354.69658 * 10 7 6 12 12 C 1.37878 * 119.99937 * 174.70167 * 10 7 6 13 13 N 1.31509 * 119.99944 * 353.04426 * 12 10 7 14 14 Si 1.86800 * 119.99987 * 173.05057 * 12 10 7 15 15 H 1.48506 * 109.46971 * 265.61488 * 14 12 10 16 16 H 1.48500 * 109.47144 * 145.61786 * 14 12 10 17 17 H 1.48495 * 109.47044 * 25.61666 * 14 12 10 18 18 C 1.38126 * 119.95774 * 0.25745 * 6 4 3 19 19 C 1.38340 * 119.97795 * 179.97438 * 2 1 3 20 20 Cl 1.73602 * 119.96165 * 0.02562 * 19 2 1 21 21 H 1.08992 * 109.47552 * 89.99513 * 1 2 3 22 22 H 1.09000 * 109.46606 * 209.99412 * 1 2 3 23 23 H 1.08997 * 109.46741 * 329.99203 * 1 2 3 24 24 H 1.08007 * 120.02428 * 0.02562 * 3 2 1 25 25 H 0.96701 * 113.99717 * 270.02452 * 5 4 3 26 26 H 1.08999 * 109.47030 * 305.37026 * 9 7 6 27 27 H 1.08998 * 109.47195 * 65.37163 * 9 7 6 28 28 H 1.09000 * 109.46810 * 185.36878 * 9 7 6 29 29 H 0.97005 * 120.00493 * 180.02562 * 13 12 10 30 30 H 1.08001 * 119.97656 * 179.74400 * 18 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1974 1.1968 0.0000 4 6 3.5844 1.1963 0.0005 5 8 4.2653 2.3727 0.0000 6 6 4.2759 -0.0065 0.0005 7 6 5.7829 -0.0098 0.0005 8 1 6.1485 1.0170 0.0010 9 6 6.2912 -0.7323 1.2498 10 6 6.2837 -0.7212 -1.2299 11 1 5.5846 -1.2043 -1.8966 12 6 7.6344 -0.7555 -1.5047 13 7 8.4724 -0.0550 -0.7722 14 14 8.2740 -1.7968 -2.9175 15 1 8.6922 -3.1257 -2.4031 16 1 9.4379 -1.1200 -3.5440 17 1 7.2005 -1.9727 -3.9283 18 6 3.5822 -1.2009 -0.0054 19 6 2.1983 -1.1983 0.0005 20 17 1.3287 -2.7008 0.0005 21 1 -0.3634 0.0001 -1.0276 22 1 -0.3632 -0.8901 0.5138 23 1 -0.3633 0.8899 0.5140 24 1 1.6573 2.1322 0.0004 25 1 4.4624 2.7126 -0.8836 26 1 5.8525 -0.2761 2.1372 27 1 6.0062 -1.7834 1.2029 28 1 7.3772 -0.6522 1.2992 29 1 9.4226 -0.0788 -0.9657 30 1 4.1201 -2.1374 -0.0096 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259826985.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 15:11:07 Heat of formation + Delta-G solvation = -46.912454 kcal Electronic energy + Delta-G solvation = -14956.593947 eV Core-core repulsion = 12356.088637 eV Total energy + Delta-G solvation = -2600.505310 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 240.066 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -39.54241 -36.79598 -35.63933 -34.67832 -32.14599 -29.92700 -29.20825 -26.04462 -25.10442 -22.47851 -21.67640 -19.74797 -17.41044 -16.49188 -15.83747 -15.45880 -14.70439 -14.45304 -13.71733 -13.43617 -12.85905 -12.77849 -12.48184 -12.12518 -11.77460 -11.63500 -11.44252 -11.16483 -10.94054 -10.63419 -10.58348 -10.48344 -10.25490 -10.08657 -9.29489 -9.06964 -8.41324 -8.23811 -7.74287 -6.08259 -4.12543 1.57181 1.79035 2.51863 3.26789 3.34419 3.37484 3.99338 4.39741 4.73805 5.14631 5.19910 5.26311 5.53454 5.71647 5.76340 5.97136 6.02209 6.20686 6.41774 6.65101 6.71942 6.78785 6.88780 7.04754 7.13535 7.31038 7.64947 7.87350 7.94308 8.19975 8.30580 8.90667 9.51572 10.99996 Molecular weight = 240.07amu Principal moments of inertia in cm(-1) A = 0.025657 B = 0.007937 C = 0.006778 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1091.041532 B = 3526.769601 C = 4130.305406 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.093 4.093 3 C -0.140 4.140 4 C 0.102 3.898 5 O -0.493 6.493 6 C -0.047 4.047 7 C 0.071 3.929 8 H 0.054 0.946 9 C -0.125 4.125 10 C -0.515 4.515 11 H 0.057 0.943 12 C 0.066 3.934 13 N -0.886 5.886 14 Si 0.889 3.111 15 H -0.280 1.280 16 H -0.286 1.286 17 H -0.274 1.274 18 C -0.086 4.086 19 C -0.045 4.045 20 Cl -0.087 7.087 21 H 0.068 0.932 22 H 0.069 0.931 23 H 0.064 0.936 24 H 0.126 0.874 25 H 0.388 0.612 26 H 0.013 0.987 27 H 0.031 0.969 28 H 0.069 0.931 29 H 0.262 0.738 30 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.135 0.378 0.863 12.172 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.094 4.094 3 C -0.159 4.159 4 C 0.057 3.943 5 O -0.302 6.302 6 C -0.048 4.048 7 C 0.053 3.947 8 H 0.072 0.928 9 C -0.183 4.183 10 C -0.553 4.553 11 H 0.075 0.925 12 C -0.136 4.136 13 N -0.524 5.524 14 Si 0.717 3.283 15 H -0.206 1.206 16 H -0.212 1.212 17 H -0.198 1.198 18 C -0.104 4.104 19 C -0.072 4.072 20 Cl -0.059 7.059 21 H 0.087 0.913 22 H 0.088 0.912 23 H 0.083 0.917 24 H 0.144 0.856 25 H 0.244 0.756 26 H 0.032 0.968 27 H 0.050 0.950 28 H 0.088 0.912 29 H 0.071 0.929 30 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -12.049 0.236 1.493 12.144 hybrid contribution 0.462 -0.649 -1.315 1.538 sum -11.588 -0.413 0.178 11.596 Atomic orbital electron populations 1.20754 0.90900 1.02752 1.02253 1.19340 0.95994 0.91025 1.03007 1.21074 0.93455 0.97221 1.04121 1.18443 0.89179 0.85752 1.00932 1.84762 1.76356 1.35738 1.33389 1.20989 0.99791 0.90537 0.93492 1.17862 0.83241 0.98970 0.94641 0.92764 1.21719 1.02551 0.98256 0.95790 1.21104 0.92008 1.34604 1.07568 0.92457 1.24943 0.96982 0.95281 0.96425 1.69954 1.03063 1.39485 1.39867 0.86619 0.78595 0.80638 0.82443 1.20595 1.21214 1.19830 1.20895 0.90614 0.99636 0.99287 1.20800 0.92372 0.85697 1.08294 1.98307 1.77046 1.33355 1.97153 0.91340 0.91240 0.91715 0.85561 0.75576 0.96801 0.94952 0.91185 0.92863 0.84585 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.33 9.61 36.01 0.35 -0.99 16 2 C -0.09 -1.46 5.88 -104.61 -0.62 -2.08 16 3 C -0.14 -2.27 9.64 -39.44 -0.38 -2.65 16 4 C 0.10 1.93 6.68 -39.22 -0.26 1.67 16 5 O -0.49 -8.96 12.27 -19.50 -0.24 -9.20 16 6 C -0.05 -1.00 4.76 -104.48 -0.50 -1.50 16 7 C 0.07 1.74 2.31 -92.92 -0.21 1.53 16 8 H 0.05 1.44 6.96 -51.93 -0.36 1.08 16 9 C -0.13 -2.98 8.70 37.16 0.32 -2.66 16 10 C -0.51 -13.62 8.19 -34.44 -0.28 -13.90 16 11 H 0.06 1.52 7.54 -52.48 -0.40 1.12 16 12 C 0.07 1.78 5.27 -17.82 -0.09 1.68 16 13 N -0.89 -24.82 12.06 55.43 0.67 -24.16 16 14 Si 0.89 20.85 29.54 -169.99 -5.02 15.82 16 15 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 16 H -0.29 -6.68 7.11 56.52 0.40 -6.28 16 17 H -0.27 -6.35 7.11 56.52 0.40 -5.95 16 18 C -0.09 -1.69 8.48 -39.57 -0.34 -2.03 16 19 C -0.05 -0.78 6.31 -39.49 -0.25 -1.03 16 20 Cl -0.09 -1.32 27.28 -51.86 -1.41 -2.74 16 21 H 0.07 0.76 8.14 -51.93 -0.42 0.34 16 22 H 0.07 0.82 6.90 -51.93 -0.36 0.46 16 23 H 0.06 0.68 8.08 -51.93 -0.42 0.26 16 24 H 0.13 1.72 8.06 -52.48 -0.42 1.30 16 25 H 0.39 5.55 9.06 45.56 0.41 5.96 16 26 H 0.01 0.29 8.14 -51.93 -0.42 -0.13 16 27 H 0.03 0.73 7.60 -51.93 -0.39 0.33 16 28 H 0.07 1.80 6.92 -51.93 -0.36 1.44 16 29 H 0.26 7.00 8.31 -40.82 -0.34 6.66 16 30 H 0.14 2.74 7.65 -52.49 -0.40 2.34 16 LS Contribution 271.68 15.07 4.09 4.09 Total: -1.00 -28.48 271.68 -6.85 -35.34 By element: Atomic # 1 Polarization: 5.47 SS G_CDS: -2.68 Total: 2.79 kcal Atomic # 6 Polarization: -19.69 SS G_CDS: -2.26 Total: -21.95 kcal Atomic # 7 Polarization: -24.82 SS G_CDS: 0.67 Total: -24.16 kcal Atomic # 8 Polarization: -8.96 SS G_CDS: -0.24 Total: -9.20 kcal Atomic # 14 Polarization: 20.85 SS G_CDS: -5.02 Total: 15.82 kcal Atomic # 17 Polarization: -1.32 SS G_CDS: -1.41 Total: -2.74 kcal Total LS contribution 4.09 Total: 4.09 kcal Total: -28.48 -6.85 -35.34 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259826985.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.577 kcal (2) G-P(sol) polarization free energy of solvation -28.481 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.058 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.854 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.335 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.912 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds