Wall clock time and date at job start Thu Apr 9 2020 15:11:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38291 * 119.93890 * 2 1 4 4 C 1.38216 * 120.03896 * 179.97438 * 3 2 1 5 5 Cl 1.73602 * 120.03762 * 180.02562 * 4 3 2 6 6 C 1.38854 * 119.92412 * 0.05117 * 4 3 2 7 7 O 1.35930 * 120.05902 * 180.24640 * 6 4 3 8 8 C 1.38665 * 119.88177 * 359.97438 * 6 4 3 9 9 C 1.50695 * 120.01981 * 180.02562 * 8 6 4 10 10 C 1.53006 * 109.47200 * 279.99536 * 9 8 6 11 11 C 1.50704 * 109.47231 * 179.97438 * 10 9 8 12 12 H 1.08002 * 120.00005 * 0.02562 * 11 10 9 13 13 C 1.37877 * 120.00099 * 179.97438 * 11 10 9 14 14 N 1.31522 * 119.99702 * 0.02562 * 13 11 10 15 15 Si 1.86800 * 120.00215 * 180.02562 * 13 11 10 16 16 H 1.48502 * 109.47097 * 90.00291 * 15 13 11 17 17 H 1.48495 * 109.47177 * 210.00618 * 15 13 11 18 18 H 1.48502 * 109.47011 * 330.00474 * 15 13 11 19 19 C 1.38193 * 119.95698 * 0.02562 * 8 6 4 20 20 H 1.09002 * 109.47017 * 269.97845 * 1 2 3 21 21 H 1.09009 * 109.47124 * 29.97622 * 1 2 3 22 22 H 1.08994 * 109.47418 * 149.97308 * 1 2 3 23 23 H 1.08000 * 119.98440 * 0.02562 * 3 2 1 24 24 H 0.96694 * 114.00183 * 269.73017 * 7 6 4 25 25 H 1.08998 * 109.47312 * 39.99648 * 9 8 6 26 26 H 1.09007 * 109.47200 * 159.99945 * 9 8 6 27 27 H 1.08998 * 109.47079 * 300.00255 * 10 9 8 28 28 H 1.09009 * 109.46881 * 60.00628 * 10 9 8 29 29 H 0.96994 * 119.99527 * 179.97438 * 14 13 11 30 30 H 1.08002 * 119.96021 * 180.02562 * 19 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1971 1.1984 0.0000 4 6 3.5793 1.2008 0.0005 5 17 4.4457 2.7052 0.0012 6 6 4.2741 -0.0014 0.0000 7 8 5.6334 -0.0023 0.0056 8 6 3.5788 -1.2012 -0.0005 9 6 4.3297 -2.5077 -0.0005 10 6 4.8014 -2.8249 -1.4211 11 6 5.5529 -4.1312 -1.4210 12 1 5.6808 -4.6805 -0.4999 13 6 6.0762 -4.6256 -2.5969 14 7 5.9200 -3.9568 -3.7186 15 14 7.0070 -6.2451 -2.5969 16 1 6.0583 -7.3614 -2.8401 17 1 8.0340 -6.2258 -3.6693 18 1 7.6688 -6.4357 -1.2812 19 6 2.1969 -1.1979 -0.0011 20 1 -0.3633 -0.0004 1.0277 21 1 -0.3634 0.8903 -0.5135 22 1 -0.3634 -0.8897 -0.5142 23 1 1.6559 2.1329 0.0004 24 1 6.0303 -0.0042 -0.8761 25 1 5.1930 -2.4306 0.6603 26 1 3.6733 -3.3041 0.3505 27 1 3.9381 -2.9019 -2.0819 28 1 5.4579 -2.0286 -1.7722 29 1 6.2884 -4.3045 -4.5457 30 1 1.6553 -2.1323 -0.0011 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259842470.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 15:11:11 Heat of formation + Delta-G solvation = -52.085143 kcal Electronic energy + Delta-G solvation = -14579.804565 eV Core-core repulsion = 11979.074950 eV Total energy + Delta-G solvation = -2600.729615 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 240.066 amu Computer time = 0.19 seconds Orbital eigenvalues (eV) -39.77510 -36.63211 -36.34968 -34.14876 -32.27602 -31.21293 -29.12980 -26.24440 -25.15185 -22.31237 -21.57930 -19.95330 -17.92942 -16.45080 -16.12941 -15.51637 -15.03308 -14.48858 -13.88696 -13.49651 -13.24136 -12.82543 -12.52900 -12.40726 -12.31894 -11.80344 -11.57702 -11.34189 -10.95232 -10.86443 -10.85190 -10.56821 -10.16796 -9.87250 -9.64600 -9.14980 -8.39294 -8.35713 -8.09686 -6.04391 -4.07250 1.31894 1.45895 2.30194 3.30053 3.36620 3.40186 3.70516 4.43011 4.51139 4.89511 5.03438 5.31073 5.31930 5.42713 5.59477 5.59784 5.80370 5.90419 6.13362 6.19996 6.30762 6.60282 6.62631 6.82135 6.87244 7.05864 7.59245 7.71713 7.93510 8.00506 8.35429 8.98977 9.57246 11.06649 Molecular weight = 240.07amu Principal moments of inertia in cm(-1) A = 0.029148 B = 0.006048 C = 0.005334 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 960.392111 B = 4628.530598 C = 5248.218807 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.109 4.109 2 C -0.087 4.087 3 C -0.118 4.118 4 C -0.057 4.057 5 Cl -0.072 7.072 6 C 0.113 3.887 7 O -0.484 6.484 8 C -0.067 4.067 9 C -0.077 4.077 10 C 0.033 3.967 11 C -0.521 4.521 12 H 0.056 0.944 13 C 0.058 3.942 14 N -0.895 5.895 15 Si 0.893 3.107 16 H -0.280 1.280 17 H -0.286 1.286 18 H -0.273 1.273 19 C -0.105 4.105 20 H 0.069 0.931 21 H 0.065 0.935 22 H 0.069 0.931 23 H 0.129 0.871 24 H 0.395 0.605 25 H 0.070 0.930 26 H 0.062 0.938 27 H 0.016 0.984 28 H 0.014 0.986 29 H 0.261 0.739 30 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.238 9.985 6.426 14.453 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.087 4.087 3 C -0.137 4.137 4 C -0.084 4.084 5 Cl -0.043 7.043 6 C 0.067 3.933 7 O -0.295 6.295 8 C -0.067 4.067 9 C -0.114 4.114 10 C -0.004 4.004 11 C -0.559 4.559 12 H 0.075 0.925 13 C -0.143 4.143 14 N -0.534 5.534 15 Si 0.720 3.280 16 H -0.207 1.207 17 H -0.212 1.212 18 H -0.198 1.198 19 C -0.123 4.123 20 H 0.088 0.912 21 H 0.084 0.916 22 H 0.088 0.912 23 H 0.147 0.853 24 H 0.252 0.748 25 H 0.088 0.912 26 H 0.080 0.920 27 H 0.035 0.965 28 H 0.033 0.967 29 H 0.070 0.930 30 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -8.169 10.119 6.842 14.695 hybrid contribution 0.734 -0.687 -0.701 1.226 sum -7.435 9.432 6.140 13.489 Atomic orbital electron populations 1.20746 0.90752 1.02890 1.02222 1.19787 0.96161 0.92364 1.00392 1.20659 0.91266 0.98436 1.03319 1.21350 0.92702 0.86427 1.07948 1.98337 1.77249 1.31712 1.97024 1.18028 0.83912 0.89929 1.01448 1.84745 1.14713 1.96044 1.34010 1.20692 0.93882 0.95951 0.96208 1.20790 0.98451 0.90038 1.02155 1.19019 0.96076 0.96483 0.88793 1.21222 1.34593 1.05969 0.94146 0.92530 1.25014 0.96291 0.97432 0.95610 1.69963 1.45884 1.38686 0.98887 0.86582 0.79684 0.83913 0.77777 1.20655 1.21208 1.19807 1.21009 0.93208 0.97805 1.00270 0.91220 0.91625 0.91221 0.85307 0.74779 0.91181 0.91982 0.96534 0.96744 0.92952 0.85201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.10 10.01 36.00 0.36 -0.73 16 2 C -0.09 -1.18 5.88 -104.61 -0.62 -1.80 16 3 C -0.12 -1.64 9.48 -39.57 -0.38 -2.02 16 4 C -0.06 -0.90 6.33 -39.36 -0.25 -1.15 16 5 Cl -0.07 -1.04 28.51 -51.86 -1.48 -2.51 16 6 C 0.11 1.99 6.67 -39.20 -0.26 1.73 16 7 O -0.48 -8.58 12.13 -19.52 -0.24 -8.82 16 8 C -0.07 -1.21 5.15 -104.48 -0.54 -1.75 16 9 C -0.08 -1.58 4.95 -27.88 -0.14 -1.72 16 10 C 0.03 0.83 4.95 -27.88 -0.14 0.70 16 11 C -0.52 -14.45 9.11 -34.44 -0.31 -14.76 16 12 H 0.06 1.53 7.74 -52.49 -0.41 1.12 16 13 C 0.06 1.63 5.46 -17.82 -0.10 1.53 16 14 N -0.90 -26.41 13.29 55.43 0.74 -25.68 16 15 Si 0.89 21.39 29.54 -169.99 -5.02 16.37 16 16 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 17 H -0.29 -6.81 7.11 56.52 0.40 -6.41 16 18 H -0.27 -6.43 7.11 56.52 0.40 -6.03 16 19 C -0.10 -1.65 9.32 -39.60 -0.37 -2.02 16 20 H 0.07 0.61 8.14 -51.93 -0.42 0.19 16 21 H 0.06 0.57 8.08 -51.92 -0.42 0.15 16 22 H 0.07 0.66 8.08 -51.93 -0.42 0.24 16 23 H 0.13 1.48 8.06 -52.49 -0.42 1.06 16 24 H 0.39 6.14 8.64 45.56 0.39 6.53 16 25 H 0.07 1.47 7.85 -51.93 -0.41 1.07 16 26 H 0.06 1.22 8.00 -51.92 -0.42 0.80 16 27 H 0.02 0.44 8.14 -51.93 -0.42 0.02 16 28 H 0.01 0.37 7.66 -51.92 -0.40 -0.03 16 29 H 0.26 7.28 8.31 -40.82 -0.34 6.94 16 30 H 0.13 1.86 8.04 -52.49 -0.42 1.43 16 LS Contribution 278.84 15.07 4.20 4.20 Total: -1.00 -30.13 278.84 -7.43 -37.56 By element: Atomic # 1 Polarization: 3.77 SS G_CDS: -2.90 Total: 0.87 kcal Atomic # 6 Polarization: -19.26 SS G_CDS: -2.73 Total: -21.99 kcal Atomic # 7 Polarization: -26.41 SS G_CDS: 0.74 Total: -25.68 kcal Atomic # 8 Polarization: -8.58 SS G_CDS: -0.24 Total: -8.82 kcal Atomic # 14 Polarization: 21.39 SS G_CDS: -5.02 Total: 16.37 kcal Atomic # 17 Polarization: -1.04 SS G_CDS: -1.48 Total: -2.51 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -30.13 -7.43 -37.56 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259842470.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.528 kcal (2) G-P(sol) polarization free energy of solvation -30.127 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.655 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.557 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.085 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.19 seconds