Wall clock time and date at job start Thu Apr 9 2020 15:11:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35661 * 116.99571 * 2 1 4 4 C 1.38406 * 120.19046 * 270.25111 * 3 2 1 5 5 C 1.50693 * 119.90869 * 359.97438 * 4 3 2 6 6 C 1.38281 * 120.18694 * 180.26353 * 4 3 2 7 7 C 1.50701 * 119.70928 * 179.76308 * 6 4 3 8 8 C 1.38952 * 120.57753 * 359.73805 * 6 4 3 9 9 Cl 1.73602 * 119.80829 * 179.97438 * 8 6 4 10 10 C 1.37568 * 120.38308 * 0.02562 * 8 6 4 11 11 C 1.40733 * 119.79957 * 359.97438 * 10 8 6 12 12 C 1.41149 * 120.28408 * 179.97438 * 11 10 8 13 13 H 1.07997 * 119.99832 * 205.34354 * 12 11 10 14 14 C 1.39926 * 119.99952 * 25.34666 * 12 11 10 15 15 N 1.30866 * 120.00145 * 26.46461 * 14 12 11 16 16 Si 1.86800 * 119.99780 * 206.46508 * 14 12 11 17 17 H 1.48504 * 109.47217 * 180.02562 * 16 14 12 18 18 H 1.48500 * 109.47201 * 299.99613 * 16 14 12 19 19 H 1.48500 * 109.47546 * 60.00104 * 16 14 12 20 20 H 1.09004 * 109.47215 * 60.00192 * 1 2 3 21 21 H 1.09007 * 109.46892 * 179.97438 * 1 2 3 22 22 H 1.09001 * 109.47525 * 299.99954 * 1 2 3 23 23 H 1.09010 * 109.47221 * 270.28187 * 5 4 3 24 24 H 1.08998 * 109.47436 * 30.27608 * 5 4 3 25 25 H 1.09000 * 109.47662 * 150.28540 * 5 4 3 26 26 H 1.08995 * 109.46833 * 269.97205 * 7 6 4 27 27 H 1.08996 * 109.47088 * 29.97805 * 7 6 4 28 28 H 1.08998 * 109.46707 * 149.97675 * 7 6 4 29 29 H 1.08008 * 120.10254 * 180.02562 * 10 8 6 30 30 H 0.97002 * 120.00146 * 5.88943 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 2.3561 1.8314 -1.1963 5 6 2.0105 1.1643 -2.5026 6 6 2.9886 3.0610 -1.1963 7 6 3.3273 3.7267 -2.5051 8 6 3.3142 3.6883 0.0001 9 17 4.1089 5.2316 -0.0232 10 6 3.0115 3.0931 1.2028 11 6 2.3678 1.8417 1.2214 12 6 2.0528 1.2215 2.4496 13 1 1.9508 0.1476 2.5016 14 6 1.8728 1.9980 3.5996 15 7 1.4825 3.2426 3.4943 16 14 2.1898 1.2580 5.2852 17 1 1.9280 2.2790 6.3313 18 1 1.2893 0.0955 5.4927 19 1 3.6032 0.8109 5.3719 20 1 -0.3634 0.5138 -0.8900 21 1 -0.3633 -1.0277 -0.0005 22 1 -0.3634 0.5138 0.8900 23 1 2.8411 0.5334 -2.8194 24 1 1.1181 0.5520 -2.3731 25 1 1.8225 1.9249 -3.2605 26 1 4.3230 3.4175 -2.8230 27 1 2.5977 3.4351 -3.2606 28 1 3.3063 4.8091 -2.3783 29 1 3.2663 3.5850 2.1300 30 1 1.2357 3.6019 2.6277 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259867251.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 15:11:25 Heat of formation + Delta-G solvation = -49.764834 kcal Electronic energy + Delta-G solvation = -15289.406067 eV Core-core repulsion = 12688.777068 eV Total energy + Delta-G solvation = -2600.628999 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 240.066 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -38.95912 -36.55738 -35.33328 -34.68079 -31.48534 -30.05747 -27.59799 -26.74347 -25.12989 -23.82889 -20.59027 -20.15473 -17.84704 -16.10248 -15.78136 -14.83842 -14.60993 -14.11345 -13.54936 -13.37497 -13.03369 -12.71750 -12.18902 -12.14031 -11.89877 -11.48323 -11.38092 -11.33499 -11.23635 -10.64373 -10.48690 -10.32457 -10.19506 -9.94068 -9.67711 -9.16907 -8.71535 -7.62498 -7.54238 -7.21689 -4.57374 2.32161 2.52853 3.09291 3.12962 3.17377 3.31045 3.91675 4.23155 4.80789 5.27395 5.71325 5.81558 5.93408 5.97597 6.05232 6.08432 6.18348 6.29502 6.35238 6.47759 6.53716 6.73393 6.83264 6.97040 7.22507 7.51641 7.56450 7.62974 7.88130 7.90927 8.30631 8.63346 8.88525 9.86591 Molecular weight = 240.07amu Principal moments of inertia in cm(-1) A = 0.020379 B = 0.011053 C = 0.007530 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1373.608320 B = 2532.616128 C = 3717.640716 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.322 6.322 3 C -0.031 4.031 4 C -0.048 4.048 5 C -0.104 4.104 6 C -0.214 4.214 7 C -0.090 4.090 8 C 0.019 3.981 9 Cl -0.115 7.115 10 C -0.207 4.207 11 C 0.090 3.910 12 C -0.494 4.494 13 H 0.087 0.913 14 C 0.037 3.963 15 N -0.782 5.782 16 Si 1.065 2.935 17 H -0.273 1.273 18 H -0.274 1.274 19 H -0.272 1.272 20 H 0.028 0.972 21 H 0.073 0.927 22 H 0.042 0.958 23 H 0.061 0.939 24 H 0.057 0.943 25 H 0.058 0.942 26 H 0.047 0.953 27 H 0.053 0.947 28 H 0.054 0.946 29 H 0.119 0.881 30 H 0.300 0.700 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.339 -1.098 -4.643 4.783 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.238 6.238 3 C -0.076 4.076 4 C -0.049 4.049 5 C -0.160 4.160 6 C -0.216 4.216 7 C -0.146 4.146 8 C -0.007 4.007 9 Cl -0.087 7.087 10 C -0.227 4.227 11 C 0.086 3.914 12 C -0.520 4.520 13 H 0.105 0.895 14 C -0.187 4.187 15 N -0.404 5.404 16 Si 0.888 3.112 17 H -0.197 1.197 18 H -0.199 1.199 19 H -0.197 1.197 20 H 0.047 0.953 21 H 0.091 0.909 22 H 0.060 0.940 23 H 0.079 0.921 24 H 0.076 0.924 25 H 0.077 0.923 26 H 0.066 0.934 27 H 0.072 0.928 28 H 0.073 0.927 29 H 0.137 0.863 30 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -0.182 -0.714 -3.029 3.117 hybrid contribution -0.165 0.046 -1.604 1.613 sum -0.347 -0.668 -4.632 4.693 Atomic orbital electron populations 1.22775 0.82830 1.00781 0.99658 1.85959 1.17580 1.26124 1.94179 1.18320 1.07105 0.90787 0.91350 1.19376 0.98471 0.93055 0.94031 1.20664 1.01114 0.99518 0.94709 1.18568 1.12979 0.97136 0.92906 1.20504 0.99945 0.99593 0.94603 1.20495 0.99465 0.85820 0.94916 1.98257 1.79805 1.31707 1.98902 1.20928 1.07123 0.99241 0.95431 1.17719 0.90447 0.90444 0.92786 1.20532 1.41290 0.97330 0.92890 0.89518 1.27175 0.91706 0.93986 1.05803 1.70490 1.23734 1.14486 1.31684 0.83629 0.78197 0.76231 0.73146 1.19711 1.19911 1.19700 0.95343 0.90888 0.93950 0.92059 0.92391 0.92277 0.93373 0.92832 0.92701 0.86286 0.88643 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.65 10.75 101.05 1.09 1.74 16 2 O -0.32 -7.36 8.93 -18.68 -0.17 -7.52 16 3 C -0.03 -0.75 5.72 -38.35 -0.22 -0.97 16 4 C -0.05 -1.07 5.89 -104.55 -0.62 -1.68 16 5 C -0.10 -1.84 9.36 36.00 0.34 -1.50 16 6 C -0.21 -4.64 5.90 -104.34 -0.62 -5.26 16 7 C -0.09 -1.60 9.18 36.01 0.33 -1.27 16 8 C 0.02 0.45 6.30 -39.56 -0.25 0.20 16 9 Cl -0.12 -2.31 27.24 -51.86 -1.41 -3.72 16 10 C -0.21 -5.21 7.74 -38.88 -0.30 -5.51 16 11 C 0.09 2.33 5.30 -106.69 -0.57 1.76 16 12 C -0.49 -12.72 8.64 -37.85 -0.33 -13.05 16 13 H 0.09 2.24 7.72 -52.49 -0.41 1.84 16 14 C 0.04 0.90 4.91 -17.33 -0.09 0.81 16 15 N -0.78 -20.07 12.32 55.55 0.68 -19.39 16 16 Si 1.07 21.01 30.01 -169.99 -5.10 15.91 16 17 H -0.27 -5.33 7.11 56.52 0.40 -4.93 16 18 H -0.27 -5.11 7.11 56.52 0.40 -4.71 16 19 H -0.27 -5.22 7.11 56.52 0.40 -4.82 16 20 H 0.03 0.49 7.23 -51.93 -0.38 0.12 16 21 H 0.07 1.15 8.14 -51.92 -0.42 0.72 16 22 H 0.04 0.85 8.14 -51.93 -0.42 0.43 16 23 H 0.06 1.03 8.14 -51.92 -0.42 0.61 16 24 H 0.06 1.00 6.29 -51.93 -0.33 0.67 16 25 H 0.06 0.93 5.91 -51.93 -0.31 0.62 16 26 H 0.05 0.81 8.14 -51.93 -0.42 0.38 16 27 H 0.05 0.85 5.91 -51.93 -0.31 0.54 16 28 H 0.05 0.94 6.87 -51.93 -0.36 0.59 16 29 H 0.12 3.10 6.53 -52.48 -0.34 2.76 16 30 H 0.30 7.93 6.78 -40.82 -0.28 7.66 16 LS Contribution 265.32 15.07 4.00 4.00 Total: -1.00 -26.58 265.32 -6.41 -32.98 By element: Atomic # 1 Polarization: 5.66 SS G_CDS: -3.18 Total: 2.47 kcal Atomic # 6 Polarization: -23.50 SS G_CDS: -1.22 Total: -24.73 kcal Atomic # 7 Polarization: -20.07 SS G_CDS: 0.68 Total: -19.39 kcal Atomic # 8 Polarization: -7.36 SS G_CDS: -0.17 Total: -7.52 kcal Atomic # 14 Polarization: 21.01 SS G_CDS: -5.10 Total: 15.91 kcal Atomic # 17 Polarization: -2.31 SS G_CDS: -1.41 Total: -3.72 kcal Total LS contribution 4.00 Total: 4.00 kcal Total: -26.58 -6.41 -32.98 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259867251.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.781 kcal (2) G-P(sol) polarization free energy of solvation -26.579 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.360 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.405 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.984 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.765 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds