Wall clock time and date at job start Thu Apr 9 2020 15:11:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35931 * 116.99797 * 2 1 4 4 C 1.38715 * 120.05897 * 0.02562 * 3 2 1 5 5 C 1.38145 * 119.95520 * 179.97438 * 4 3 2 6 6 C 1.50706 * 119.96012 * 179.97438 * 5 4 3 7 7 C 1.38275 * 120.07851 * 0.02562 * 5 4 3 8 8 C 1.38241 * 120.12236 * 0.02562 * 7 5 4 9 9 C 1.50697 * 119.98431 * 179.97438 * 8 7 5 10 10 C 1.50699 * 109.47254 * 100.01562 * 9 8 7 11 11 H 1.08001 * 120.00258 * 0.02562 * 10 9 8 12 12 C 1.37882 * 120.00058 * 180.02562 * 10 9 8 13 13 N 1.31512 * 119.99607 * 0.02562 * 12 10 9 14 14 Si 1.86798 * 119.99877 * 180.02562 * 12 10 9 15 15 H 1.48501 * 109.47260 * 60.00214 * 14 12 10 16 16 H 1.48499 * 109.46869 * 179.97438 * 14 12 10 17 17 H 1.48497 * 109.47136 * 299.99947 * 14 12 10 18 18 C 1.38261 * 120.04095 * 359.97438 * 8 7 5 19 19 Cl 1.73595 * 120.03965 * 180.02562 * 18 8 7 20 20 H 1.08997 * 109.47320 * 299.99780 * 1 2 3 21 21 H 1.09004 * 109.47114 * 60.00394 * 1 2 3 22 22 H 1.09002 * 109.46713 * 179.97438 * 1 2 3 23 23 H 1.08001 * 120.01531 * 359.70561 * 4 3 2 24 24 H 1.09001 * 109.47067 * 90.00096 * 6 5 4 25 25 H 1.08995 * 109.47102 * 210.00448 * 6 5 4 26 26 H 1.09003 * 109.46732 * 330.00105 * 6 5 4 27 27 H 1.08005 * 119.94048 * 179.97438 * 7 5 4 28 28 H 1.08994 * 109.47556 * 220.02096 * 9 8 7 29 29 H 1.09007 * 109.46699 * 340.02158 * 9 8 7 30 30 H 0.96998 * 119.99433 * 180.02562 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0461 1.2112 0.0000 4 6 1.2917 2.3753 0.0005 5 6 1.9211 3.6051 0.0011 6 6 1.1017 4.8699 0.0011 7 6 3.3020 3.6769 0.0005 8 6 4.0569 2.5188 -0.0011 9 6 5.5616 2.6007 -0.0022 10 6 6.0778 2.3800 1.3963 11 1 5.3855 2.1982 2.2051 12 6 7.4340 2.4103 1.6434 13 7 8.2769 2.6321 0.6586 14 14 8.0738 2.1361 3.3768 15 1 7.6521 0.7944 3.8537 16 1 9.5566 2.2169 3.3757 17 1 7.5215 3.1783 4.2790 18 6 3.4322 1.2853 -0.0016 19 17 4.3802 -0.1689 -0.0030 20 1 -0.3634 0.5138 0.8900 21 1 -0.3633 0.5138 -0.8900 22 1 -0.3633 -1.0277 -0.0005 23 1 0.2131 2.3201 -0.0038 24 1 0.9037 5.1745 1.0287 25 1 1.6512 5.6588 -0.5124 26 1 0.1573 4.6909 -0.5132 27 1 3.7917 4.6395 0.0005 28 1 5.9667 1.8352 -0.6640 29 1 5.8716 3.5852 -0.3528 30 1 9.2310 2.6530 0.8324 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259929502.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 15:11:36 Heat of formation + Delta-G solvation = -36.113762 kcal Electronic energy + Delta-G solvation = -14799.287810 eV Core-core repulsion = 12199.250766 eV Total energy + Delta-G solvation = -2600.037044 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 240.066 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -39.81998 -37.45548 -35.57166 -33.58690 -31.97723 -30.44261 -27.67706 -27.22925 -25.91793 -23.27924 -21.43575 -19.90851 -17.17726 -16.30554 -16.14439 -15.71723 -15.54483 -14.52133 -13.80533 -13.49701 -13.23047 -12.96890 -12.60184 -12.28662 -12.04489 -11.74369 -11.34099 -11.17412 -10.96504 -10.86847 -10.60442 -10.47366 -10.32996 -9.97151 -9.48726 -9.36592 -8.36200 -7.87480 -7.60968 -5.99055 -4.01043 1.72324 1.90944 3.07081 3.36449 3.39974 3.43886 3.50536 4.15355 4.50912 4.99744 5.19583 5.21534 5.25267 5.34696 5.38159 5.52780 5.73730 5.75737 5.88006 5.98702 6.13073 6.45167 6.57017 6.80949 6.98439 7.25825 7.53960 7.65764 7.75634 7.96110 8.33303 9.01197 9.61315 11.11557 Molecular weight = 240.07amu Principal moments of inertia in cm(-1) A = 0.025395 B = 0.008128 C = 0.006891 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1102.325981 B = 3444.231594 C = 4062.277789 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.309 6.309 3 C 0.130 3.870 4 C -0.226 4.226 5 C -0.053 4.053 6 C -0.110 4.110 7 C -0.151 4.151 8 C 0.011 3.989 9 C 0.047 3.953 10 C -0.501 4.501 11 H 0.056 0.944 12 C 0.061 3.939 13 N -0.894 5.894 14 Si 0.893 3.107 15 H -0.276 1.276 16 H -0.287 1.287 17 H -0.277 1.277 18 C -0.071 4.071 19 Cl -0.054 7.054 20 H 0.052 0.948 21 H 0.052 0.948 22 H 0.095 0.905 23 H 0.124 0.876 24 H 0.069 0.931 25 H 0.067 0.933 26 H 0.060 0.940 27 H 0.127 0.873 28 H 0.042 0.958 29 H 0.032 0.968 30 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.922 -0.338 -2.128 15.077 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.223 6.223 3 C 0.084 3.916 4 C -0.245 4.245 5 C -0.053 4.053 6 C -0.166 4.166 7 C -0.169 4.169 8 C 0.010 3.990 9 C 0.011 3.989 10 C -0.539 4.539 11 H 0.074 0.926 12 C -0.140 4.140 13 N -0.533 5.533 14 Si 0.720 3.280 15 H -0.201 1.201 16 H -0.213 1.213 17 H -0.202 1.202 18 C -0.099 4.099 19 Cl -0.025 7.025 20 H 0.071 0.929 21 H 0.070 0.930 22 H 0.114 0.886 23 H 0.142 0.858 24 H 0.087 0.913 25 H 0.086 0.914 26 H 0.079 0.921 27 H 0.145 0.855 28 H 0.060 0.940 29 H 0.050 0.950 30 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -14.563 -0.649 -2.171 14.738 hybrid contribution 0.211 -0.171 1.001 1.037 sum -14.353 -0.820 -1.170 14.424 Atomic orbital electron populations 1.22980 0.79166 1.03395 1.01018 1.86145 1.20640 1.26604 1.88892 1.18670 0.90576 0.84510 0.97817 1.20733 0.99016 0.91347 1.13403 1.19676 0.94059 0.94217 0.97363 1.20751 0.98892 0.94860 1.02130 1.20870 0.92188 0.98397 1.05471 1.20501 0.99819 0.89366 0.89311 1.18446 0.83025 0.98910 0.98567 1.20855 0.91532 1.48875 0.92679 0.92603 1.24928 0.96837 0.95256 0.96989 1.69940 1.02552 1.49640 1.31218 0.86638 0.77577 0.78934 0.84821 1.20116 1.21267 1.20242 1.20060 0.87749 0.89352 1.12704 1.98328 1.72063 1.35216 1.96936 0.92939 0.92988 0.88630 0.85782 0.91262 0.91388 0.92066 0.85484 0.93970 0.95000 0.92852 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.33 9.81 101.05 0.99 1.32 16 2 O -0.31 -5.15 9.96 -19.52 -0.19 -5.34 16 3 C 0.13 2.39 6.68 -39.19 -0.26 2.13 16 4 C -0.23 -3.59 8.69 -39.44 -0.34 -3.93 16 5 C -0.05 -0.85 5.88 -104.64 -0.62 -1.47 16 6 C -0.11 -1.30 10.01 36.01 0.36 -0.94 16 7 C -0.15 -2.89 9.32 -39.57 -0.37 -3.26 16 8 C 0.01 0.24 5.08 -104.61 -0.53 -0.29 16 9 C 0.05 1.22 4.57 -29.04 -0.13 1.09 16 10 C -0.50 -14.06 8.86 -34.44 -0.31 -14.36 16 11 H 0.06 1.58 7.74 -52.49 -0.41 1.17 16 12 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 13 N -0.89 -26.50 13.29 55.43 0.74 -25.76 16 14 Si 0.89 21.91 29.54 -169.99 -5.02 16.89 16 15 H -0.28 -6.74 7.11 56.52 0.40 -6.34 16 16 H -0.29 -6.94 7.11 56.52 0.40 -6.53 16 17 H -0.28 -6.66 7.11 56.52 0.40 -6.26 16 18 C -0.07 -1.53 6.32 -39.36 -0.25 -1.78 16 19 Cl -0.05 -1.19 26.87 -51.86 -1.39 -2.58 16 20 H 0.05 0.52 7.67 -51.93 -0.40 0.12 16 21 H 0.05 0.50 7.66 -51.93 -0.40 0.10 16 22 H 0.10 0.82 8.14 -51.93 -0.42 0.40 16 23 H 0.12 1.56 6.30 -52.49 -0.33 1.23 16 24 H 0.07 0.76 8.14 -51.93 -0.42 0.34 16 25 H 0.07 0.75 8.08 -51.93 -0.42 0.33 16 26 H 0.06 0.61 8.08 -51.93 -0.42 0.19 16 27 H 0.13 2.30 8.03 -52.48 -0.42 1.87 16 28 H 0.04 1.16 7.35 -51.93 -0.38 0.78 16 29 H 0.03 0.85 8.00 -51.93 -0.42 0.43 16 30 H 0.26 7.36 8.31 -40.82 -0.34 7.03 16 LS Contribution 275.16 15.07 4.15 4.15 Total: -1.00 -30.77 275.16 -6.85 -37.62 By element: Atomic # 1 Polarization: -1.56 SS G_CDS: -3.57 Total: -5.13 kcal Atomic # 6 Polarization: -18.29 SS G_CDS: -1.55 Total: -19.85 kcal Atomic # 7 Polarization: -26.50 SS G_CDS: 0.74 Total: -25.76 kcal Atomic # 8 Polarization: -5.15 SS G_CDS: -0.19 Total: -5.34 kcal Atomic # 14 Polarization: 21.91 SS G_CDS: -5.02 Total: 16.89 kcal Atomic # 17 Polarization: -1.19 SS G_CDS: -1.39 Total: -2.58 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -30.77 -6.85 -37.62 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259929502.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.507 kcal (2) G-P(sol) polarization free energy of solvation -30.773 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.266 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.848 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.621 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.114 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.18 seconds