Wall clock time and date at job start Thu Apr 9 2020 15:11:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38735 * 120.03004 * 2 1 4 4 O 1.35904 * 120.04849 * 0.03916 * 3 2 1 5 5 C 1.38721 * 119.89908 * 179.79186 * 3 2 1 6 6 C 1.38170 * 119.96902 * 0.50429 * 5 3 2 7 7 C 1.50707 * 119.96220 * 179.74837 * 6 5 3 8 8 H 1.08995 * 109.46963 * 359.72547 * 7 6 5 9 9 C 1.52999 * 109.46640 * 239.72219 * 7 6 5 10 10 C 1.50697 * 109.46656 * 119.72553 * 7 6 5 11 11 H 1.08002 * 120.00599 * 0.02562 * 10 7 6 12 12 C 1.37880 * 119.99675 * 179.97438 * 10 7 6 13 13 N 1.31517 * 120.00210 * 179.97438 * 12 10 7 14 14 Si 1.86800 * 120.00019 * 0.02562 * 12 10 7 15 15 H 1.48503 * 109.46845 * 269.99914 * 14 12 10 16 16 H 1.48503 * 109.47399 * 29.99403 * 14 12 10 17 17 H 1.48498 * 109.47295 * 150.00010 * 14 12 10 18 18 C 1.38221 * 120.06718 * 359.47089 * 6 5 3 19 19 C 1.38236 * 120.03794 * 180.02562 * 2 1 3 20 20 Cl 1.73602 * 119.98168 * 359.97438 * 19 2 1 21 21 H 1.08997 * 109.47289 * 269.97743 * 1 2 3 22 22 H 1.09001 * 109.47655 * 29.97939 * 1 2 3 23 23 H 1.09000 * 109.46902 * 149.98353 * 1 2 3 24 24 H 0.96699 * 113.99773 * 90.00466 * 4 3 2 25 25 H 1.07997 * 120.01141 * 180.23132 * 5 3 2 26 26 H 1.09000 * 109.47280 * 299.99919 * 9 7 6 27 27 H 1.08998 * 109.47206 * 60.00324 * 9 7 6 28 28 H 1.09006 * 109.46667 * 180.02562 * 9 7 6 29 29 H 0.96998 * 119.99640 * 180.02562 * 13 12 10 30 30 H 1.08004 * 119.94766 * 180.25143 * 18 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2013 1.2011 0.0000 4 8 1.5234 2.3790 0.0008 5 6 3.5885 1.1979 0.0044 6 6 4.2760 -0.0006 -0.0018 7 6 5.7831 -0.0038 -0.0028 8 1 6.1486 1.0231 -0.0030 9 6 6.2906 -0.7262 -1.2524 10 6 6.2846 -0.7153 1.2273 11 1 5.5824 -1.1246 1.9385 12 6 7.6400 -0.8446 1.4444 13 7 8.0778 -1.4651 2.5182 14 14 8.8547 -0.1373 0.2140 15 1 9.1730 -1.1623 -0.8124 16 1 8.2571 1.0526 -0.4435 17 1 10.0995 0.2598 0.9196 18 6 3.5830 -1.1965 -0.0013 19 6 2.1990 -1.1967 -0.0005 20 17 1.3315 -2.7004 -0.0005 21 1 -0.3634 -0.0004 1.0276 22 1 -0.3634 0.8901 -0.5135 23 1 -0.3633 -0.8898 -0.5141 24 1 1.3278 2.7196 0.8844 25 1 4.1308 2.1319 0.0082 26 1 5.9250 -1.7531 -1.2521 27 1 5.9278 -0.2116 -2.1421 28 1 7.3807 -0.7289 -1.2529 29 1 9.0314 -1.5557 2.6710 30 1 4.1223 -2.1322 -0.0021 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259931485.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 15:11:38 Heat of formation + Delta-G solvation = -37.163691 kcal Electronic energy + Delta-G solvation = -14884.636969 eV Core-core repulsion = 12284.554397 eV Total energy + Delta-G solvation = -2600.082572 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 240.066 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -39.71952 -36.99062 -36.24928 -34.35135 -32.23940 -30.61324 -29.47850 -26.23928 -25.07343 -22.45418 -21.97300 -20.00872 -17.55492 -16.81219 -15.77717 -15.61666 -14.96452 -14.72735 -14.21485 -13.43953 -13.08156 -12.92761 -12.41853 -12.35230 -12.16693 -12.02450 -11.62995 -11.28557 -11.17525 -10.79983 -10.63304 -10.48436 -10.18965 -10.00965 -9.44454 -9.21945 -8.64936 -8.23883 -7.96559 -6.15103 -4.16195 1.52570 1.61421 2.41384 3.22163 3.32483 3.34880 3.90911 4.33400 4.47524 5.04941 5.17376 5.19246 5.46964 5.71578 5.82084 5.88350 5.91068 5.96436 6.23683 6.28827 6.44999 6.53161 6.63680 6.68400 6.84038 6.94809 7.12968 7.41876 7.61886 7.82372 8.40979 8.88066 9.45054 10.97448 Molecular weight = 240.07amu Principal moments of inertia in cm(-1) A = 0.029040 B = 0.007502 C = 0.006570 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 963.963052 B = 3731.618245 C = 4260.918725 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.108 4.108 2 C -0.128 4.128 3 C 0.108 3.892 4 O -0.496 6.496 5 C -0.144 4.144 6 C -0.004 4.004 7 C 0.039 3.961 8 H 0.039 0.961 9 C -0.146 4.146 10 C -0.513 4.513 11 H 0.077 0.923 12 C 0.073 3.927 13 N -0.896 5.896 14 Si 0.887 3.113 15 H -0.278 1.278 16 H -0.266 1.266 17 H -0.297 1.297 18 C -0.100 4.100 19 C -0.022 4.022 20 Cl -0.080 7.080 21 H 0.066 0.934 22 H 0.070 0.930 23 H 0.068 0.932 24 H 0.386 0.614 25 H 0.129 0.871 26 H 0.055 0.945 27 H 0.032 0.968 28 H 0.043 0.957 29 H 0.265 0.735 30 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.016 3.286 -5.227 13.510 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C -0.130 4.130 3 C 0.063 3.937 4 O -0.305 6.305 5 C -0.162 4.162 6 C -0.005 4.005 7 C 0.020 3.980 8 H 0.057 0.943 9 C -0.203 4.203 10 C -0.551 4.551 11 H 0.096 0.904 12 C -0.130 4.130 13 N -0.533 5.533 14 Si 0.718 3.282 15 H -0.205 1.205 16 H -0.191 1.191 17 H -0.224 1.224 18 C -0.118 4.118 19 C -0.049 4.049 20 Cl -0.051 7.051 21 H 0.085 0.915 22 H 0.089 0.911 23 H 0.087 0.913 24 H 0.241 0.759 25 H 0.147 0.853 26 H 0.074 0.926 27 H 0.051 0.949 28 H 0.062 0.938 29 H 0.075 0.925 30 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -11.908 3.032 -5.731 13.559 hybrid contribution 0.732 0.207 0.018 0.761 sum -11.176 3.239 -5.713 12.963 Atomic orbital electron populations 1.20650 0.90580 1.03064 1.02172 1.19780 0.96654 0.91112 1.05428 1.17990 0.89522 0.84119 1.02054 1.84774 1.76626 1.35870 1.33256 1.21465 0.92792 0.99118 1.02862 1.20045 0.97553 0.90770 0.92114 1.18379 0.86514 0.97756 0.95323 0.94260 1.22183 0.99926 1.00915 0.97281 1.20915 0.92633 1.36418 1.05127 0.90445 1.24987 0.98241 0.94496 0.95232 1.69884 1.14663 1.42153 1.26627 0.86852 0.80448 0.80033 0.80897 1.20490 1.19098 1.22414 1.21034 0.90754 1.00083 0.99941 1.20601 0.92240 0.85715 1.06335 1.98321 1.77086 1.32639 1.97028 0.91544 0.91113 0.91301 0.75927 0.85310 0.92558 0.94885 0.93813 0.92478 0.84338 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.36 9.39 36.01 0.34 -1.02 16 2 C -0.13 -2.02 5.90 -104.44 -0.62 -2.64 16 3 C 0.11 1.72 6.68 -39.22 -0.26 1.46 16 4 O -0.50 -6.62 12.55 -19.44 -0.24 -6.87 16 5 C -0.14 -2.56 9.61 -39.43 -0.38 -2.94 16 6 C 0.00 -0.09 4.73 -104.65 -0.50 -0.58 16 7 C 0.04 0.88 2.07 -92.92 -0.19 0.69 16 8 H 0.04 0.89 6.93 -51.93 -0.36 0.53 16 9 C -0.15 -3.06 8.49 37.16 0.32 -2.74 16 10 C -0.51 -13.79 8.82 -34.44 -0.30 -14.10 16 11 H 0.08 2.28 7.84 -52.49 -0.41 1.86 16 12 C 0.07 2.02 5.45 -17.82 -0.10 1.93 16 13 N -0.90 -26.67 13.96 55.43 0.77 -25.90 16 14 Si 0.89 21.26 24.37 -169.99 -4.14 17.12 16 15 H -0.28 -6.50 6.87 56.52 0.39 -6.11 16 16 H -0.27 -6.06 6.53 56.52 0.37 -5.69 16 17 H -0.30 -7.15 7.11 56.52 0.40 -6.75 16 18 C -0.10 -1.91 8.49 -39.53 -0.34 -2.24 16 19 C -0.02 -0.38 6.31 -39.52 -0.25 -0.63 16 20 Cl -0.08 -1.20 27.29 -51.86 -1.42 -2.62 16 21 H 0.07 0.75 8.14 -51.93 -0.42 0.33 16 22 H 0.07 0.83 7.53 -51.93 -0.39 0.44 16 23 H 0.07 0.84 6.90 -51.93 -0.36 0.48 16 24 H 0.39 3.37 9.06 45.56 0.41 3.79 16 25 H 0.13 2.14 7.94 -52.49 -0.42 1.73 16 26 H 0.06 1.14 7.38 -51.93 -0.38 0.75 16 27 H 0.03 0.60 8.14 -51.93 -0.42 0.18 16 28 H 0.04 0.95 3.27 -51.93 -0.17 0.78 16 29 H 0.27 7.42 8.31 -40.82 -0.34 7.08 16 30 H 0.14 2.73 7.57 -52.48 -0.40 2.34 16 LS Contribution 263.64 15.07 3.97 3.97 Total: -1.00 -29.53 263.64 -5.83 -35.37 By element: Atomic # 1 Polarization: 4.24 SS G_CDS: -2.50 Total: 1.73 kcal Atomic # 6 Polarization: -20.54 SS G_CDS: -2.28 Total: -22.82 kcal Atomic # 7 Polarization: -26.67 SS G_CDS: 0.77 Total: -25.90 kcal Atomic # 8 Polarization: -6.62 SS G_CDS: -0.24 Total: -6.87 kcal Atomic # 14 Polarization: 21.26 SS G_CDS: -4.14 Total: 17.12 kcal Atomic # 17 Polarization: -1.20 SS G_CDS: -1.42 Total: -2.62 kcal Total LS contribution 3.97 Total: 3.97 kcal Total: -29.53 -5.83 -35.37 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259931485.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.795 kcal (2) G-P(sol) polarization free energy of solvation -29.535 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.330 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.834 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.369 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.164 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds