Wall clock time and date at job start Thu Apr 9 2020 15:11:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.38170 * 119.97682 * 2 1 4 4 C 1.38698 * 119.95359 * 180.02562 * 3 2 1 5 5 O 1.35917 * 120.04069 * 180.02562 * 4 3 2 6 6 C 1.38743 * 119.92020 * 359.97438 * 4 3 2 7 7 C 1.38127 * 119.95066 * 0.02562 * 6 4 3 8 8 C 1.50702 * 119.97248 * 179.97438 * 7 6 4 9 9 H 1.09002 * 109.47011 * 179.97438 * 8 7 6 10 10 C 1.53004 * 109.47377 * 60.00182 * 8 7 6 11 11 C 1.50697 * 109.47469 * 300.00017 * 8 7 6 12 12 H 1.08005 * 119.99985 * 5.61173 * 11 8 7 13 13 C 1.37881 * 120.00354 * 185.61960 * 11 8 7 14 14 N 1.31508 * 120.00074 * 197.60953 * 13 11 8 15 15 Si 1.86797 * 119.99976 * 17.59909 * 13 11 8 16 16 H 1.48502 * 109.47201 * 180.02562 * 15 13 11 17 17 H 1.48497 * 109.47208 * 300.00679 * 15 13 11 18 18 H 1.48508 * 109.47059 * 60.00269 * 15 13 11 19 19 C 1.38340 * 119.98077 * 180.25696 * 2 1 3 20 20 Cl 1.73605 * 119.95621 * 0.02562 * 19 2 1 21 21 H 1.09004 * 109.47397 * 89.99692 * 1 2 3 22 22 H 1.08999 * 109.47254 * 209.99754 * 1 2 3 23 23 H 1.09001 * 109.47268 * 329.99934 * 1 2 3 24 24 H 1.07996 * 120.02023 * 359.97438 * 3 2 1 25 25 H 0.96703 * 113.99872 * 269.97608 * 5 4 3 26 26 H 1.07998 * 120.02691 * 179.97438 * 6 4 3 27 27 H 1.08995 * 109.47036 * 186.17371 * 10 8 7 28 28 H 1.08996 * 109.46765 * 306.17461 * 10 8 7 29 29 H 1.09003 * 109.46742 * 66.17105 * 10 8 7 30 30 H 0.97010 * 119.99924 * 354.78384 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1973 1.1969 0.0000 4 6 3.5843 1.1963 -0.0005 5 8 4.2652 2.3726 0.0000 6 6 4.2759 -0.0065 -0.0005 7 6 3.5821 -1.2009 -0.0005 8 6 4.3327 -2.5076 -0.0011 9 1 3.6226 -3.3346 -0.0006 10 6 5.2127 -2.5910 1.2478 11 6 5.1985 -2.5891 -1.2319 12 1 5.2747 -1.7406 -1.8957 13 6 5.8932 -3.7471 -1.5107 14 7 6.8973 -3.7232 -2.3596 15 14 5.4082 -5.3496 -0.6825 16 1 6.3045 -6.4384 -1.1479 17 1 5.5315 -5.2029 0.7900 18 1 4.0032 -5.6815 -1.0309 19 6 2.1983 -1.1983 -0.0054 20 17 1.3286 -2.7008 -0.0128 21 1 -0.3634 0.0001 -1.0277 22 1 -0.3634 -0.8900 0.5138 23 1 -0.3634 0.8900 0.5138 24 1 1.6573 2.1321 -0.0004 25 1 4.4622 2.7134 -0.8833 26 1 5.3559 -0.0089 -0.0014 27 1 5.8366 -3.4830 1.1938 28 1 5.8472 -1.7066 1.3047 29 1 4.5809 -2.6425 2.1346 30 1 7.1017 -2.9094 -2.8464 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259944508.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Thu Apr 9 2020 15:11:48 Heat of formation + Delta-G solvation = -43.214549 kcal Electronic energy + Delta-G solvation = -15058.563162 eV Core-core repulsion = 12458.218205 eV Total energy + Delta-G solvation = -2600.344957 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 240.066 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -39.63409 -37.09388 -35.67952 -34.80823 -32.21428 -30.61973 -28.66874 -26.66252 -24.76915 -22.68347 -21.67025 -19.30783 -17.51437 -17.43888 -16.29407 -15.89144 -14.85461 -14.12439 -13.70559 -13.29310 -13.16784 -12.75620 -12.66350 -12.34144 -11.92312 -11.91824 -11.78038 -11.20093 -10.95451 -10.69371 -10.59475 -10.35963 -10.10611 -9.71999 -9.54042 -8.97754 -8.28218 -8.19737 -7.96227 -6.47316 -4.09499 1.46045 1.69912 2.65890 3.38570 3.44430 3.60680 3.87074 4.45880 4.47446 5.04023 5.11772 5.25565 5.44243 5.65772 5.70737 5.84062 5.93702 6.08973 6.21574 6.43440 6.53488 6.60896 6.69499 6.75504 6.84345 7.05097 7.21389 7.46649 7.86512 8.03014 8.34234 8.86113 9.57306 10.91546 Molecular weight = 240.07amu Principal moments of inertia in cm(-1) A = 0.024223 B = 0.009850 C = 0.007704 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1155.627221 B = 2842.040288 C = 3633.735957 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.114 4.114 2 C -0.067 4.067 3 C -0.161 4.161 4 C 0.105 3.895 5 O -0.501 6.501 6 C -0.128 4.128 7 C 0.004 3.996 8 C 0.036 3.964 9 H 0.045 0.955 10 C -0.145 4.145 11 C -0.590 4.590 12 H 0.057 0.943 13 C 0.034 3.966 14 N -0.904 5.904 15 Si 1.039 2.961 16 H -0.285 1.285 17 H -0.272 1.272 18 H -0.280 1.280 19 C -0.055 4.055 20 Cl -0.072 7.072 21 H 0.071 0.929 22 H 0.072 0.928 23 H 0.065 0.935 24 H 0.127 0.873 25 H 0.387 0.613 26 H 0.137 0.863 27 H 0.059 0.941 28 H 0.045 0.955 29 H 0.024 0.976 30 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.314 7.265 4.725 13.471 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.170 4.170 2 C -0.068 4.068 3 C -0.180 4.180 4 C 0.061 3.939 5 O -0.311 6.311 6 C -0.147 4.147 7 C 0.003 3.997 8 C 0.017 3.983 9 H 0.063 0.937 10 C -0.202 4.202 11 C -0.628 4.628 12 H 0.075 0.925 13 C -0.171 4.171 14 N -0.538 5.538 15 Si 0.868 3.132 16 H -0.211 1.211 17 H -0.199 1.199 18 H -0.207 1.207 19 C -0.081 4.081 20 Cl -0.043 7.043 21 H 0.090 0.910 22 H 0.091 0.909 23 H 0.084 0.916 24 H 0.145 0.855 25 H 0.242 0.758 26 H 0.154 0.846 27 H 0.077 0.923 28 H 0.064 0.936 29 H 0.043 0.957 30 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -9.987 5.472 5.477 12.637 hybrid contribution -0.382 1.699 -0.816 1.923 sum -10.370 7.171 4.662 13.442 Atomic orbital electron populations 1.20810 0.90676 1.02962 1.02567 1.19473 0.96182 0.91011 1.00147 1.20942 0.93252 0.97280 1.06528 1.18518 0.89754 0.85182 1.00433 1.84785 1.76526 1.36408 1.33379 1.21270 1.01200 0.90273 1.01973 1.20100 0.90734 0.97546 0.91300 1.18378 0.94448 0.89431 0.96004 0.93710 1.22238 0.99534 1.01832 0.96610 1.21862 1.30532 1.01873 1.08531 0.92463 1.25714 0.92181 1.01888 0.97291 1.70874 1.23420 1.32413 1.27103 0.84119 0.76527 0.76010 0.76582 1.21138 1.19860 1.20656 1.20731 0.92146 0.86163 1.09092 1.98305 1.75986 1.33011 1.97012 0.90987 0.90930 0.91571 0.85533 0.75758 0.84558 0.92262 0.93603 0.95662 0.92257 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.42 9.61 36.00 0.35 -1.07 16 2 C -0.07 -1.08 5.88 -104.61 -0.62 -1.70 16 3 C -0.16 -2.50 9.64 -39.44 -0.38 -2.88 16 4 C 0.11 1.79 6.70 -39.22 -0.26 1.53 16 5 O -0.50 -7.39 13.50 -19.48 -0.26 -7.65 16 6 C -0.13 -2.54 8.52 -39.44 -0.34 -2.88 16 7 C 0.00 0.09 4.75 -104.61 -0.50 -0.41 16 8 C 0.04 0.86 1.96 -92.92 -0.18 0.68 16 9 H 0.05 1.07 4.81 -51.93 -0.25 0.82 16 10 C -0.14 -3.19 8.77 37.16 0.33 -2.87 16 11 C -0.59 -16.16 8.53 -34.44 -0.29 -16.45 16 12 H 0.06 1.68 7.77 -52.48 -0.41 1.28 16 13 C 0.03 0.98 5.29 -17.82 -0.09 0.88 16 14 N -0.90 -27.34 13.69 55.43 0.76 -26.58 16 15 Si 1.04 25.09 26.29 -169.99 -4.47 20.62 16 16 H -0.29 -6.93 7.11 56.52 0.40 -6.53 16 17 H -0.27 -6.06 5.76 56.52 0.33 -5.74 16 18 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 19 C -0.05 -1.04 6.31 -39.49 -0.25 -1.29 16 20 Cl -0.07 -1.30 25.33 -51.86 -1.31 -2.62 16 21 H 0.07 0.83 8.14 -51.93 -0.42 0.41 16 22 H 0.07 0.90 6.91 -51.93 -0.36 0.54 16 23 H 0.07 0.68 8.08 -51.93 -0.42 0.26 16 24 H 0.13 1.62 8.06 -52.49 -0.42 1.19 16 25 H 0.39 3.87 9.06 45.56 0.41 4.28 16 26 H 0.14 2.80 7.54 -52.49 -0.40 2.40 16 27 H 0.06 1.35 4.89 -51.93 -0.25 1.10 16 28 H 0.04 0.98 7.19 -51.93 -0.37 0.60 16 29 H 0.02 0.49 8.14 -51.93 -0.42 0.07 16 30 H 0.27 8.04 8.73 -40.82 -0.36 7.68 16 LS Contribution 264.09 15.07 3.98 3.98 Total: -1.00 -30.36 264.09 -6.09 -36.45 By element: Atomic # 1 Polarization: 4.79 SS G_CDS: -2.54 Total: 2.25 kcal Atomic # 6 Polarization: -24.22 SS G_CDS: -2.24 Total: -26.45 kcal Atomic # 7 Polarization: -27.34 SS G_CDS: 0.76 Total: -26.58 kcal Atomic # 8 Polarization: -7.39 SS G_CDS: -0.26 Total: -7.65 kcal Atomic # 14 Polarization: 25.09 SS G_CDS: -4.47 Total: 20.62 kcal Atomic # 17 Polarization: -1.30 SS G_CDS: -1.31 Total: -2.62 kcal Total LS contribution 3.98 Total: 3.98 kcal Total: -30.36 -6.09 -36.45 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259944508.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.764 kcal (2) G-P(sol) polarization free energy of solvation -30.362 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.126 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.088 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.451 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.215 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds