Wall clock time and date at job start Tue Mar 31 2020 01:06:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.50699 * 110.53149 * 2 1 4 4 C 1.38214 * 120.01442 * 121.40034 * 3 2 1 5 5 C 1.38232 * 120.02931 * 179.97438 * 4 3 2 6 6 C 1.38265 * 120.04778 * 359.97438 * 5 4 3 7 7 C 1.38175 * 120.02281 * 0.02562 * 6 5 4 8 8 C 1.38444 * 120.01442 * 301.37710 * 3 2 1 9 9 F 1.35103 * 120.02359 * 359.74367 * 8 3 2 10 10 N 1.47311 * 110.60215 * 122.82767 * 2 1 3 11 11 C 1.34533 * 106.61412 * 118.68244 * 10 2 1 12 12 O 1.21526 * 123.76396 * 180.02562 * 11 10 2 13 13 N 1.33785 * 112.46293 * 0.02562 * 11 10 2 14 14 C 1.37503 * 124.18005 * 179.97438 * 13 11 10 15 15 H 1.08005 * 120.00196 * 327.09490 * 14 13 11 16 16 C 1.38893 * 120.00312 * 147.08761 * 14 13 11 17 17 N 1.31386 * 120.00283 * 340.12587 * 16 14 13 18 18 Si 1.86806 * 120.00347 * 160.12043 * 16 14 13 19 19 H 1.48497 * 109.46707 * 0.02562 * 18 16 14 20 20 H 1.48499 * 109.47042 * 120.00214 * 18 16 14 21 21 H 1.48501 * 109.47154 * 240.00503 * 18 16 14 22 22 C 1.34770 * 111.64230 * 359.97438 * 13 11 10 23 23 O 1.21233 * 127.15751 * 180.02562 * 22 13 11 24 24 H 1.08992 * 109.47431 * 60.00328 * 1 2 3 25 25 H 1.09009 * 109.46608 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.47163 * 299.99640 * 1 2 3 27 27 H 1.08005 * 119.98834 * 359.97394 * 4 3 2 28 28 H 1.07998 * 119.97182 * 179.97438 * 5 4 3 29 29 H 1.08005 * 119.98439 * 179.97438 * 6 5 4 30 30 H 1.08011 * 120.00662 * 180.02562 * 7 6 5 31 31 H 0.96996 * 126.69231 * 298.71741 * 10 2 1 32 32 H 0.96995 * 120.00486 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0585 1.4113 0.0000 4 6 2.8849 1.8400 1.0215 5 6 3.3704 3.1343 1.0215 6 6 3.0303 4.0013 -0.0004 7 6 2.2042 3.5748 -1.0227 8 6 1.7169 2.2787 -1.0235 9 9 0.9137 1.8590 -2.0255 10 7 2.0483 -0.7475 1.1587 11 6 2.7629 -1.7751 0.6652 12 8 3.3321 -2.5959 1.3573 13 7 2.7767 -1.7922 -0.6725 14 6 3.4341 -2.7359 -1.4261 15 1 4.3545 -3.1704 -1.0647 16 6 2.9144 -3.1308 -2.6522 17 7 1.6457 -2.9252 -2.9249 18 14 4.0192 -3.9540 -3.9137 19 1 5.3948 -4.0693 -3.3664 20 1 3.4945 -5.3085 -4.2223 21 1 4.0464 -3.1390 -5.1547 22 6 2.0669 -0.7702 -1.1901 23 8 1.8935 -0.5192 -2.3634 24 1 -0.3634 0.5137 -0.8899 25 1 -0.3633 -1.0278 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 3.1516 1.1636 1.8201 28 1 4.0157 3.4685 1.8204 29 1 3.4098 5.0125 0.0008 30 1 1.9390 4.2522 -1.8211 31 1 1.9025 -0.5397 2.0948 32 1 1.2828 -3.2005 -3.7812 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000049418791.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 01:06:09 Heat of formation + Delta-G solvation = -44.338071 kcal Electronic energy + Delta-G solvation = -22350.904836 eV Core-core repulsion = 18806.644540 eV Total energy + Delta-G solvation = -3544.260295 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 278.085 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -48.52725 -41.40729 -38.75891 -37.06790 -35.40106 -34.22026 -31.96327 -30.87226 -30.55061 -29.00297 -25.82071 -24.10628 -22.68898 -22.28190 -20.83539 -20.03124 -17.67650 -17.38648 -16.31696 -16.21482 -15.92152 -15.65783 -15.21097 -14.80260 -14.41990 -14.16825 -13.99806 -13.74415 -13.41940 -13.15619 -12.84297 -12.45380 -12.17311 -12.02009 -11.83257 -11.61062 -11.46992 -11.04334 -10.89840 -10.74277 -10.35969 -9.68258 -9.30615 -9.14445 -8.84320 -8.72691 -8.39292 -7.91638 -6.41382 -4.17221 1.20086 1.27990 2.94604 3.21481 3.27053 3.32951 3.50095 3.62797 4.12583 4.38287 4.45506 4.50284 4.68315 4.83609 4.94422 5.12827 5.26036 5.31515 5.33905 5.51075 5.81584 5.89992 6.01607 6.12827 6.22282 6.35407 6.40081 6.44642 6.63479 6.96259 7.45009 7.57785 7.96658 8.18985 8.74164 9.02145 9.20004 9.79222 10.68431 Molecular weight = 278.09amu Principal moments of inertia in cm(-1) A = 0.020926 B = 0.007421 C = 0.006602 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1337.745987 B = 3772.028118 C = 4239.852584 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C 0.159 3.841 3 C -0.115 4.115 4 C -0.077 4.077 5 C -0.136 4.136 6 C -0.093 4.093 7 C -0.160 4.160 8 C 0.126 3.874 9 F -0.117 7.117 10 N -0.738 5.738 11 C 0.679 3.321 12 O -0.569 6.569 13 N -0.406 5.406 14 C -0.353 4.353 15 H 0.104 0.896 16 C 0.058 3.942 17 N -0.826 5.826 18 Si 0.929 3.071 19 H -0.265 1.265 20 H -0.280 1.280 21 H -0.277 1.277 22 C 0.502 3.498 23 O -0.443 6.443 24 H 0.082 0.918 25 H 0.072 0.928 26 H 0.063 0.937 27 H 0.134 0.866 28 H 0.128 0.872 29 H 0.130 0.870 30 H 0.135 0.865 31 H 0.422 0.578 32 H 0.273 0.727 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.330 13.176 5.895 14.496 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C 0.067 3.933 3 C -0.117 4.117 4 C -0.095 4.095 5 C -0.154 4.154 6 C -0.111 4.111 7 C -0.179 4.179 8 C 0.106 3.894 9 F -0.095 7.095 10 N -0.403 5.403 11 C 0.382 3.618 12 O -0.447 6.447 13 N -0.138 5.138 14 C -0.479 4.479 15 H 0.122 0.878 16 C -0.154 4.154 17 N -0.459 5.459 18 Si 0.754 3.246 19 H -0.190 1.190 20 H -0.205 1.205 21 H -0.202 1.202 22 C 0.287 3.713 23 O -0.311 6.311 24 H 0.101 0.899 25 H 0.091 0.909 26 H 0.082 0.918 27 H 0.151 0.849 28 H 0.146 0.854 29 H 0.148 0.852 30 H 0.153 0.847 31 H 0.264 0.736 32 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -1.257 12.724 5.311 13.845 hybrid contribution 0.093 -0.362 -0.304 0.482 sum -1.164 12.362 5.007 13.388 Atomic orbital electron populations 1.21947 0.90870 1.03904 1.03169 1.20148 0.96247 0.88937 0.87953 1.19804 1.01121 0.94504 0.96285 1.20920 0.95066 0.95946 0.97610 1.21133 1.01161 0.93646 0.99451 1.20983 0.96788 0.99843 0.93496 1.21121 1.00947 0.94663 1.01126 1.17485 0.92915 0.92751 0.86232 1.91587 1.69864 1.90242 1.57854 1.45596 1.56604 1.30508 1.07591 1.16388 0.80119 0.81506 0.83764 1.90817 1.49971 1.42018 1.61879 1.41807 1.44009 1.23727 1.04235 1.19392 1.06581 1.21079 1.00819 0.87832 1.25328 0.95366 0.95896 0.98778 1.69915 1.11550 1.41140 1.23248 0.85865 0.80284 0.78272 0.80158 1.18956 1.20546 1.20246 1.19852 0.81889 0.81175 0.88413 1.90631 1.56661 1.67926 1.15916 0.89912 0.90865 0.91761 0.84867 0.85391 0.85235 0.84697 0.73580 0.91720 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.40 8.76 37.16 0.33 -2.07 16 2 C 0.16 3.08 1.03 -133.25 -0.14 2.95 16 3 C -0.11 -1.94 4.83 -104.56 -0.50 -2.44 16 4 C -0.08 -1.08 9.38 -39.59 -0.37 -1.45 16 5 C -0.14 -1.56 10.05 -39.57 -0.40 -1.95 16 6 C -0.09 -1.02 10.04 -39.59 -0.40 -1.42 16 7 C -0.16 -2.09 10.03 -39.52 -0.40 -2.49 16 8 C 0.13 2.10 6.82 -39.42 -0.27 1.83 16 9 F -0.12 -2.23 13.34 2.25 0.03 -2.20 16 10 N -0.74 -13.78 4.60 -54.03 -0.25 -14.03 16 11 C 0.68 16.60 8.57 -88.02 -0.75 15.85 16 12 O -0.57 -15.30 17.62 5.34 0.09 -15.21 16 13 N -0.41 -10.95 2.69 -65.57 -0.18 -11.13 16 14 C -0.35 -10.18 9.46 -14.76 -0.14 -10.32 16 15 H 0.10 2.96 7.91 -52.48 -0.41 2.55 16 16 C 0.06 1.62 4.82 -17.50 -0.08 1.53 16 17 N -0.83 -23.95 11.19 55.49 0.62 -23.33 16 18 Si 0.93 21.52 29.60 -169.99 -5.03 16.49 16 19 H -0.27 -5.98 7.11 56.52 0.40 -5.58 16 20 H -0.28 -6.29 7.11 56.52 0.40 -5.89 16 21 H -0.28 -6.41 7.11 56.52 0.40 -6.00 16 22 C 0.50 12.70 6.06 -10.55 -0.06 12.63 16 23 O -0.44 -12.34 13.67 5.60 0.08 -12.26 16 24 H 0.08 1.45 6.31 -51.93 -0.33 1.12 16 25 H 0.07 1.34 8.14 -51.92 -0.42 0.92 16 26 H 0.06 0.86 8.14 -51.93 -0.42 0.44 16 27 H 0.13 1.73 6.69 -52.48 -0.35 1.37 16 28 H 0.13 1.10 8.06 -52.49 -0.42 0.68 16 29 H 0.13 1.01 8.06 -52.48 -0.42 0.59 16 30 H 0.14 1.47 8.06 -52.48 -0.42 1.05 16 31 H 0.42 6.17 8.52 -40.82 -0.35 5.82 16 32 H 0.27 7.44 8.31 -40.82 -0.34 7.10 16 LS Contribution 282.07 15.07 4.25 4.25 Total: -1.00 -34.34 282.07 -6.26 -40.60 By element: Atomic # 1 Polarization: 6.86 SS G_CDS: -2.69 Total: 4.17 kcal Atomic # 6 Polarization: 15.83 SS G_CDS: -3.19 Total: 12.64 kcal Atomic # 7 Polarization: -48.68 SS G_CDS: 0.20 Total: -48.48 kcal Atomic # 8 Polarization: -27.64 SS G_CDS: 0.17 Total: -27.47 kcal Atomic # 9 Polarization: -2.23 SS G_CDS: 0.03 Total: -2.20 kcal Atomic # 14 Polarization: 21.52 SS G_CDS: -5.03 Total: 16.49 kcal Total LS contribution 4.25 Total: 4.25 kcal Total: -34.34 -6.26 -40.60 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000049418791.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.734 kcal (2) G-P(sol) polarization free energy of solvation -34.340 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.074 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.264 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.604 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.338 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds