Wall clock time and date at job start Tue Mar 31 2020 00:26:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13604 * 1 3 3 C 1.43200 * 179.97438 * 2 1 4 4 C 1.39750 * 120.09012 * 317.69701 * 3 2 1 5 5 C 1.37757 * 119.94482 * 180.30168 * 4 3 2 6 6 C 1.38903 * 120.12258 * 359.43910 * 5 4 3 7 7 O 1.35810 * 119.91329 * 180.26128 * 6 5 4 8 8 C 1.42900 * 116.99939 * 0.29383 * 7 6 5 9 9 C 1.50703 * 109.47124 * 180.02562 * 8 7 6 10 10 O 1.21277 * 120.00153 * 0.02562 * 9 8 7 11 11 N 1.34780 * 119.99989 * 180.02562 * 9 8 7 12 12 C 1.46492 * 120.00074 * 180.02562 * 11 9 8 13 13 C 1.50696 * 109.47463 * 180.02562 * 12 11 9 14 14 H 1.08000 * 119.99630 * 359.97438 * 13 12 11 15 15 C 1.37881 * 120.00396 * 179.97438 * 13 12 11 16 16 N 1.31516 * 119.99781 * 359.97438 * 15 13 12 17 17 Si 1.86797 * 120.00251 * 179.97438 * 15 13 12 18 18 H 1.48497 * 109.47141 * 89.99802 * 17 15 13 19 19 H 1.48497 * 109.47441 * 210.00221 * 17 15 13 20 20 H 1.48508 * 109.47077 * 330.00363 * 17 15 13 21 21 C 1.39135 * 120.17255 * 0.55693 * 6 5 4 22 22 F 1.35106 * 119.96845 * 179.70194 * 21 6 5 23 23 C 1.37923 * 120.05368 * 359.72711 * 21 6 5 24 24 H 1.08002 * 120.02333 * 0.02562 * 4 3 2 25 25 H 1.08003 * 119.93876 * 179.72143 * 5 4 3 26 26 H 1.09005 * 109.47606 * 300.00467 * 8 7 6 27 27 H 1.09005 * 109.47035 * 60.00230 * 8 7 6 28 28 H 0.97007 * 119.99598 * 359.97438 * 11 9 8 29 29 H 1.09005 * 109.46897 * 300.00069 * 12 11 9 30 30 H 1.08997 * 109.47412 * 59.99256 * 12 11 9 31 31 H 0.97001 * 119.99992 * 179.97438 * 16 15 13 32 32 H 1.08003 * 120.05547 * 180.02562 * 23 21 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2691 -0.8933 0.8138 5 6 4.6466 -0.8859 0.8161 6 6 5.3403 0.0006 0.0023 7 8 6.6984 0.0006 0.0040 8 6 7.3461 -0.9413 0.8615 9 6 8.8403 -0.7947 0.7310 10 8 9.3048 0.0349 -0.0218 11 7 9.6605 -1.5857 1.4509 12 6 11.1129 -1.4429 1.3245 13 6 11.7960 -2.4371 2.2278 14 1 11.2070 -3.1080 2.8356 15 6 13.1729 -2.4903 2.2782 16 7 13.8900 -1.6737 1.5377 17 14 14.0196 -3.7222 3.3984 18 1 14.2455 -4.9900 2.6589 19 1 15.3239 -3.1704 3.8450 20 1 13.1622 -3.9858 4.5821 21 6 4.6475 0.8928 -0.8100 22 9 5.3263 1.7574 -1.5954 23 6 3.2682 0.8955 -0.8136 24 1 2.7312 -1.5864 1.4438 25 1 5.1883 -1.5738 1.4485 26 1 7.0519 -0.7546 1.8944 27 1 7.0536 -1.9522 0.5775 28 1 9.2889 -2.2491 2.0534 29 1 11.4077 -1.6286 0.2916 30 1 11.4048 -0.4321 1.6094 31 1 14.8587 -1.7109 1.5734 32 1 2.7304 1.5878 -1.4445 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000225304970.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 00:26:45 Heat of formation + Delta-G solvation = -63.998579 kcal Electronic energy + Delta-G solvation = -19585.826752 eV Core-core repulsion = 16040.713913 eV Total energy + Delta-G solvation = -3545.112839 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 278.085 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -49.02850 -40.62978 -39.06916 -37.95673 -36.42810 -34.34650 -32.48863 -31.39562 -31.05821 -29.07359 -26.81077 -24.06080 -23.52725 -22.47816 -20.09331 -19.58716 -18.58948 -17.73504 -16.88726 -16.70997 -16.36496 -15.64485 -15.61790 -15.48616 -14.94462 -14.54725 -14.27517 -14.20261 -14.08873 -13.76382 -13.53752 -12.90702 -12.66586 -12.52972 -12.43089 -12.06636 -11.88076 -11.69411 -11.27168 -11.06328 -10.94683 -10.39797 -9.52563 -9.50241 -9.28614 -8.84344 -8.63411 -8.07095 -6.24649 -4.32673 0.25335 0.60873 2.25691 2.42188 2.45481 3.05737 3.19089 3.25530 3.27538 3.30575 3.35754 3.78103 3.96618 4.22702 4.31353 4.42329 4.51262 4.79236 4.93513 4.96728 5.11813 5.18436 5.22607 5.46233 5.52576 5.66480 6.01546 6.81020 7.08648 7.16504 7.23035 7.39413 7.53925 7.86231 8.40792 8.64126 8.87926 9.33922 10.85392 Molecular weight = 278.09amu Principal moments of inertia in cm(-1) A = 0.039967 B = 0.002795 C = 0.002618 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 700.409039 B =10014.696934 C =10694.658847 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.418 5.418 2 C 0.261 3.739 3 C -0.049 4.049 4 C -0.033 4.033 5 C -0.190 4.190 6 C 0.137 3.863 7 O -0.271 6.271 8 C 0.034 3.966 9 C 0.499 3.501 10 O -0.529 6.529 11 N -0.706 5.706 12 C 0.251 3.749 13 C -0.546 4.546 14 H 0.064 0.936 15 C 0.064 3.936 16 N -0.884 5.884 17 Si 0.906 3.094 18 H -0.278 1.278 19 H -0.284 1.284 20 H -0.272 1.272 21 C 0.072 3.928 22 F -0.120 7.120 23 C -0.067 4.067 24 H 0.144 0.856 25 H 0.152 0.848 26 H 0.096 0.904 27 H 0.096 0.904 28 H 0.392 0.608 29 H 0.030 0.970 30 H 0.030 0.970 31 H 0.267 0.733 32 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.014 0.056 -0.077 20.014 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.093 5.093 2 C -0.054 4.054 3 C -0.053 4.053 4 C -0.054 4.054 5 C -0.209 4.209 6 C 0.088 3.912 7 O -0.181 6.181 8 C -0.044 4.044 9 C 0.281 3.719 10 O -0.406 6.406 11 N -0.356 5.356 12 C 0.131 3.869 13 C -0.585 4.585 14 H 0.082 0.918 15 C -0.140 4.140 16 N -0.521 5.521 17 Si 0.733 3.267 18 H -0.204 1.204 19 H -0.210 1.210 20 H -0.197 1.197 21 C 0.052 3.948 22 F -0.099 7.099 23 C -0.088 4.088 24 H 0.162 0.838 25 H 0.170 0.830 26 H 0.114 0.886 27 H 0.114 0.886 28 H 0.225 0.775 29 H 0.048 0.952 30 H 0.048 0.952 31 H 0.077 0.923 32 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -21.010 0.875 -0.814 21.044 hybrid contribution 0.922 -0.989 0.885 1.616 sum -20.089 -0.114 0.071 20.089 Atomic orbital electron populations 1.81289 1.11916 1.07943 1.08171 1.25433 0.92294 0.93850 0.93807 1.15542 0.84603 1.01735 1.03440 1.21010 0.93217 0.95726 0.95446 1.21166 0.94702 1.02085 1.02900 1.19453 0.83914 0.93900 0.93982 1.86280 1.14283 1.56159 1.61401 1.22844 0.93308 0.93208 0.95041 1.19785 0.86752 0.83011 0.82325 1.90746 1.76955 1.35177 1.37680 1.46358 1.09573 1.36721 1.42943 1.19189 0.72003 0.97836 0.97898 1.21180 0.91799 1.19732 1.25761 0.91773 1.24960 0.97216 0.96028 0.95801 1.69970 1.06471 1.36708 1.38902 0.86387 0.78961 0.80870 0.80523 1.20414 1.20960 1.19727 1.16634 0.88864 0.93236 0.96048 1.91589 1.79646 1.66939 1.71705 1.20928 0.91209 0.98398 0.98304 0.83846 0.83023 0.88647 0.88640 0.77477 0.95219 0.95213 0.92307 0.82983 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -4.58 18.54 41.84 0.78 -3.80 16 2 C 0.26 2.22 15.33 -22.47 -0.34 1.88 16 3 C -0.05 -0.34 5.74 -106.84 -0.61 -0.96 16 4 C -0.03 -0.19 9.75 -39.19 -0.38 -0.57 16 5 C -0.19 -1.28 9.01 -39.51 -0.36 -1.64 16 6 C 0.14 1.41 6.70 -39.00 -0.26 1.15 16 7 O -0.27 -3.75 9.52 -39.05 -0.37 -4.12 16 8 C 0.03 0.40 5.21 36.01 0.19 0.59 16 9 C 0.50 9.09 7.91 -10.98 -0.09 9.00 16 10 O -0.53 -12.48 16.50 -14.35 -0.24 -12.72 16 11 N -0.71 -13.31 5.55 -61.48 -0.34 -13.65 16 12 C 0.25 6.27 5.43 -5.20 -0.03 6.24 16 13 C -0.55 -14.02 9.28 -34.44 -0.32 -14.34 16 14 H 0.06 1.51 7.60 -52.49 -0.40 1.12 16 15 C 0.06 1.71 5.46 -17.82 -0.10 1.61 16 16 N -0.88 -25.22 13.29 55.43 0.74 -24.48 16 17 Si 0.91 20.01 29.54 -169.99 -5.02 14.99 16 18 H -0.28 -6.08 7.11 56.52 0.40 -5.68 16 19 H -0.28 -6.29 7.11 56.52 0.40 -5.89 16 20 H -0.27 -5.82 7.11 56.52 0.40 -5.42 16 21 C 0.07 0.74 7.30 -39.36 -0.29 0.45 16 22 F -0.12 -1.54 17.10 2.25 0.04 -1.50 16 23 C -0.07 -0.50 9.73 -39.13 -0.38 -0.88 16 24 H 0.14 0.47 8.06 -52.49 -0.42 0.05 16 25 H 0.15 0.67 6.27 -52.48 -0.33 0.34 16 26 H 0.10 0.79 7.64 -51.93 -0.40 0.40 16 27 H 0.10 0.79 7.67 -51.93 -0.40 0.39 16 28 H 0.39 5.90 8.32 -40.82 -0.34 5.56 16 29 H 0.03 0.83 8.14 -51.93 -0.42 0.41 16 30 H 0.03 0.83 8.14 -51.93 -0.42 0.41 16 31 H 0.27 7.16 8.31 -40.82 -0.34 6.82 16 32 H 0.15 0.85 8.06 -52.48 -0.42 0.43 16 LS Contribution 306.39 15.07 4.62 4.62 Total: -1.00 -33.74 306.39 -5.46 -39.20 By element: Atomic # 1 Polarization: 1.62 SS G_CDS: -2.69 Total: -1.07 kcal Atomic # 6 Polarization: 5.50 SS G_CDS: -2.97 Total: 2.53 kcal Atomic # 7 Polarization: -43.10 SS G_CDS: 1.17 Total: -41.93 kcal Atomic # 8 Polarization: -16.23 SS G_CDS: -0.61 Total: -16.84 kcal Atomic # 9 Polarization: -1.54 SS G_CDS: 0.04 Total: -1.50 kcal Atomic # 14 Polarization: 20.01 SS G_CDS: -5.02 Total: 14.99 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -33.74 -5.46 -39.20 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000225304970.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.803 kcal (2) G-P(sol) polarization free energy of solvation -33.736 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.539 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.460 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.196 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.999 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds