Wall clock time and date at job start Tue Mar 31 2020 00:31:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.43197 * 179.97438 * 2 1 4 4 C 1.39642 * 120.11443 * 242.24660 * 3 2 1 5 5 C 1.38185 * 119.93421 * 180.02562 * 4 3 2 6 6 F 1.35095 * 119.92282 * 179.97438 * 5 4 3 7 7 C 1.38502 * 120.16162 * 359.93410 * 5 4 3 8 8 C 1.38775 * 120.22711 * 0.02810 * 7 5 4 9 9 O 1.35905 * 119.96862 * 179.97438 * 8 7 5 10 10 C 1.42897 * 117.00015 * 0.02562 * 9 8 7 11 11 C 1.50699 * 109.47169 * 180.02562 * 10 9 8 12 12 O 1.21283 * 119.99962 * 359.97438 * 11 10 9 13 13 N 1.34776 * 120.00379 * 180.02562 * 11 10 9 14 14 C 1.46500 * 120.00591 * 180.02562 * 13 11 10 15 15 C 1.50694 * 109.47345 * 179.97438 * 14 13 11 16 16 H 1.07997 * 119.99999 * 359.97438 * 15 14 13 17 17 C 1.37872 * 119.99959 * 179.97438 * 15 14 13 18 18 N 1.31523 * 119.99881 * 180.02562 * 17 15 14 19 19 Si 1.86797 * 120.00236 * 359.97438 * 17 15 14 20 20 H 1.48504 * 109.47000 * 90.00145 * 19 17 15 21 21 H 1.48496 * 109.47536 * 209.99954 * 19 17 15 22 22 H 1.48498 * 109.47203 * 330.00428 * 19 17 15 23 23 C 1.38495 * 120.06529 * 0.02562 * 8 7 5 24 24 H 1.08003 * 120.03069 * 0.05171 * 4 3 2 25 25 H 1.07997 * 119.89114 * 180.02562 * 7 5 4 26 26 H 1.08997 * 109.47017 * 299.99636 * 10 9 8 27 27 H 1.08997 * 109.47594 * 59.99819 * 10 9 8 28 28 H 0.97006 * 119.99397 * 359.97438 * 13 11 10 29 29 H 1.08997 * 109.46674 * 299.99591 * 14 13 11 30 30 H 1.08997 * 109.46977 * 59.99187 * 14 13 11 31 31 H 0.97002 * 119.99475 * 179.97438 * 18 17 15 32 32 H 1.08003 * 120.08301 * 179.70934 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5679 0.0006 0.0000 4 6 3.2683 0.5634 1.0690 5 6 4.6501 0.5625 1.0649 6 9 5.3275 1.1075 2.0989 7 6 5.3425 0.0034 0.0036 8 6 4.6533 -0.5584 -1.0618 9 8 5.3380 -1.1051 -2.1007 10 6 6.7646 -1.0669 -2.0293 11 6 7.3468 -1.7137 -3.2596 12 8 6.6122 -2.1636 -4.1134 13 7 8.6837 -1.7932 -3.4108 14 6 9.2496 -2.4215 -4.6071 15 6 10.7541 -2.3813 -4.5316 16 1 11.2402 -1.9323 -3.6782 17 6 11.5101 -2.9178 -5.5522 18 7 12.8232 -2.8832 -5.4861 19 14 10.6695 -3.6951 -7.0281 20 1 10.4458 -2.6621 -8.0713 21 1 11.5298 -4.7741 -7.5765 22 1 9.3644 -4.2671 -6.6101 23 6 3.2683 -0.5616 -1.0680 24 1 2.7305 0.9987 1.8983 25 1 6.4225 0.0047 0.0051 26 1 7.0979 -0.0307 -1.9718 27 1 7.0986 -1.6056 -1.1426 28 1 9.2712 -1.4337 -2.7277 29 1 8.9160 -3.4575 -4.6657 30 1 8.9160 -1.8817 -5.4933 31 1 13.3550 -3.2610 -6.2040 32 1 2.7316 -0.9946 -1.8992 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000386665138.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 00:31:41 Heat of formation + Delta-G solvation = -60.857363 kcal Electronic energy + Delta-G solvation = -19520.188977 eV Core-core repulsion = 15975.212351 eV Total energy + Delta-G solvation = -3544.976625 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 278.085 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -49.39385 -40.74950 -39.17273 -37.95936 -36.48973 -34.48184 -32.50888 -31.60785 -31.00892 -29.25527 -27.21968 -24.62135 -23.13762 -22.22477 -20.31922 -19.92816 -17.93024 -17.59972 -16.76581 -16.70315 -16.65180 -16.43372 -15.97878 -15.85459 -15.18085 -14.55700 -14.52774 -14.17654 -14.12620 -13.76498 -13.53754 -13.01114 -12.75127 -12.73669 -12.44210 -12.21850 -12.10281 -12.01704 -11.26275 -11.12309 -10.84146 -10.05315 -9.61206 -9.47355 -9.46103 -8.87910 -8.82569 -8.36122 -6.29692 -4.33283 0.08999 0.66348 2.10204 2.37320 2.46674 2.90198 3.21343 3.25298 3.25453 3.29481 3.36008 3.74026 3.90014 4.26062 4.35583 4.38702 4.49027 4.55685 4.77768 4.90751 5.05709 5.07207 5.28720 5.41199 5.54762 5.60593 5.99349 6.64097 6.81272 6.93915 6.98293 7.01641 7.24876 7.96295 8.32968 8.59194 8.71730 9.29208 10.81945 Molecular weight = 278.09amu Principal moments of inertia in cm(-1) A = 0.032481 B = 0.002966 C = 0.002723 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 861.833655 B = 9438.238264 C =10279.626790 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.401 5.401 2 C 0.257 3.743 3 C 0.042 3.958 4 C -0.150 4.150 5 C 0.146 3.854 6 F -0.128 7.128 7 C -0.222 4.222 8 C 0.168 3.832 9 O -0.275 6.275 10 C 0.035 3.965 11 C 0.502 3.498 12 O -0.533 6.533 13 N -0.699 5.699 14 C 0.222 3.778 15 C -0.547 4.547 16 H 0.081 0.919 17 C 0.079 3.921 18 N -0.890 5.890 19 Si 0.877 3.123 20 H -0.272 1.272 21 H -0.283 1.283 22 H -0.260 1.260 23 C -0.112 4.112 24 H 0.147 0.853 25 H 0.152 0.848 26 H 0.096 0.904 27 H 0.096 0.904 28 H 0.399 0.601 29 H 0.028 0.972 30 H 0.024 0.976 31 H 0.269 0.731 32 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.661 7.253 13.842 21.428 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.076 5.076 2 C -0.059 4.059 3 C 0.039 3.961 4 C -0.172 4.172 5 C 0.126 3.874 6 F -0.106 7.106 7 C -0.243 4.243 8 C 0.121 3.879 9 O -0.186 6.186 10 C -0.043 4.043 11 C 0.285 3.715 12 O -0.410 6.410 13 N -0.349 5.349 14 C 0.100 3.900 15 C -0.585 4.585 16 H 0.099 0.901 17 C -0.125 4.125 18 N -0.527 5.527 19 Si 0.703 3.297 20 H -0.198 1.198 21 H -0.208 1.208 22 H -0.185 1.185 23 C -0.133 4.133 24 H 0.165 0.835 25 H 0.170 0.830 26 H 0.114 0.886 27 H 0.114 0.886 28 H 0.233 0.767 29 H 0.046 0.954 30 H 0.042 0.958 31 H 0.079 0.921 32 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -16.795 6.783 12.956 22.270 hybrid contribution 0.913 -0.020 -0.092 0.918 sum -15.882 6.763 12.864 21.528 Atomic orbital electron populations 1.81293 1.11766 1.07526 1.06996 1.25323 0.92211 0.94202 0.94132 1.15211 0.84490 1.01137 0.95307 1.20942 0.92350 1.03903 0.99973 1.16980 0.89191 0.95987 0.85238 1.91562 1.79978 1.83102 1.55992 1.21497 1.02197 1.05540 0.95017 1.18461 0.91175 0.91694 0.86583 1.86254 1.19118 1.73980 1.39281 1.22757 0.78989 1.02889 0.99691 1.19822 0.83606 0.80986 0.87075 1.90726 1.59407 1.47687 1.43226 1.46064 1.04575 1.59327 1.24925 1.19566 0.94421 0.93268 0.82709 1.21041 0.88079 1.41207 1.08177 0.90126 1.24789 0.94719 0.94931 0.98110 1.69876 1.04461 1.44751 1.33582 0.86821 0.80211 0.79759 0.82938 1.19768 1.20818 1.18452 1.20440 0.91127 1.02311 0.99405 0.83503 0.83029 0.88572 0.88562 0.76735 0.95372 0.95836 0.92135 0.83050 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.40 -4.50 18.54 41.84 0.78 -3.72 16 2 C 0.26 2.29 15.33 -22.48 -0.34 1.94 16 3 C 0.04 0.31 5.73 -106.96 -0.61 -0.30 16 4 C -0.15 -0.98 9.73 -39.08 -0.38 -1.36 16 5 C 0.15 1.07 7.29 -39.50 -0.29 0.78 16 6 F -0.13 -1.03 17.26 2.25 0.04 -0.99 16 7 C -0.22 -1.68 9.01 -39.29 -0.35 -2.03 16 8 C 0.17 1.54 6.68 -39.29 -0.26 1.28 16 9 O -0.28 -3.34 9.67 -39.35 -0.38 -3.72 16 10 C 0.04 0.38 5.22 36.00 0.19 0.57 16 11 C 0.50 8.47 7.91 -10.99 -0.09 8.39 16 12 O -0.53 -11.48 16.50 -14.36 -0.24 -11.72 16 13 N -0.70 -12.51 5.55 -61.48 -0.34 -12.85 16 14 C 0.22 5.09 4.50 -5.20 -0.02 5.07 16 15 C -0.55 -14.18 9.83 -34.44 -0.34 -14.52 16 16 H 0.08 2.16 7.84 -52.49 -0.41 1.75 16 17 C 0.08 2.14 5.47 -17.82 -0.10 2.04 16 18 N -0.89 -25.51 13.96 55.43 0.77 -24.74 16 19 Si 0.88 20.61 27.47 -169.99 -4.67 15.94 16 20 H -0.27 -6.32 7.11 56.52 0.40 -5.92 16 21 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 22 H -0.26 -6.06 6.54 56.52 0.37 -5.69 16 23 C -0.11 -0.91 9.69 -39.00 -0.38 -1.29 16 24 H 0.15 0.71 8.06 -52.48 -0.42 0.28 16 25 H 0.15 0.89 6.28 -52.49 -0.33 0.57 16 26 H 0.10 0.77 7.65 -51.93 -0.40 0.37 16 27 H 0.10 0.77 7.66 -51.93 -0.40 0.37 16 28 H 0.40 5.93 8.32 -40.82 -0.34 5.59 16 29 H 0.03 0.69 7.20 -51.93 -0.37 0.31 16 30 H 0.02 0.57 7.57 -51.93 -0.39 0.17 16 31 H 0.27 7.22 8.31 -40.82 -0.34 6.88 16 32 H 0.15 1.17 8.06 -52.48 -0.42 0.74 16 LS Contribution 303.00 15.07 4.57 4.57 Total: -1.00 -32.31 303.00 -5.11 -37.41 By element: Atomic # 1 Polarization: 1.92 SS G_CDS: -2.65 Total: -0.73 kcal Atomic # 6 Polarization: 3.54 SS G_CDS: -2.98 Total: 0.56 kcal Atomic # 7 Polarization: -42.52 SS G_CDS: 1.21 Total: -41.31 kcal Atomic # 8 Polarization: -14.82 SS G_CDS: -0.62 Total: -15.44 kcal Atomic # 9 Polarization: -1.03 SS G_CDS: 0.04 Total: -0.99 kcal Atomic # 14 Polarization: 20.61 SS G_CDS: -4.67 Total: 15.94 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -32.31 -5.11 -37.41 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000386665138.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.446 kcal (2) G-P(sol) polarization free energy of solvation -32.305 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.751 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.106 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.411 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.857 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds