Wall clock time and date at job start Tue Mar 31 2020 01:11:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 N 1.46503 * 109.46940 * 2 1 4 4 C 1.35311 * 125.87116 * 124.98213 * 3 2 1 5 5 C 1.35347 * 106.17835 * 180.02562 * 4 3 2 6 6 C 1.50698 * 126.75052 * 180.02562 * 5 4 3 7 7 N 1.46900 * 109.47128 * 95.00494 * 6 5 4 8 8 C 1.46892 * 111.00284 * 179.97438 * 7 6 5 9 9 H 1.09003 * 109.47569 * 325.00276 * 8 7 6 10 10 C 1.50701 * 109.47245 * 204.99995 * 8 7 6 11 11 H 1.08003 * 120.00083 * 274.97806 * 10 8 7 12 12 C 1.37881 * 119.99778 * 94.98349 * 10 8 7 13 13 N 1.31518 * 119.99490 * 184.90694 * 12 10 8 14 14 Si 1.86797 * 120.00097 * 4.90747 * 12 10 8 15 15 H 1.48494 * 109.47277 * 84.80905 * 14 12 10 16 16 H 1.48502 * 109.46726 * 204.81286 * 14 12 10 17 17 H 1.48494 * 109.46899 * 324.80783 * 14 12 10 18 18 C 1.53004 * 109.47069 * 84.99997 * 8 7 6 19 19 F 1.39898 * 109.46760 * 54.76238 * 18 8 7 20 20 F 1.39899 * 109.46947 * 174.75948 * 18 8 7 21 21 F 1.39901 * 109.47123 * 294.76499 * 18 8 7 22 22 N 1.33770 * 106.49745 * 0.02562 * 5 4 3 23 23 N 1.28637 * 108.88279 * 359.97438 * 22 5 4 24 24 H 1.08996 * 109.47022 * 299.99782 * 1 2 3 25 25 H 1.09004 * 109.47065 * 60.00065 * 1 2 3 26 26 H 1.08998 * 109.47124 * 179.97438 * 1 2 3 27 27 H 1.08996 * 109.47022 * 240.00218 * 2 1 3 28 28 H 1.08994 * 109.47285 * 119.99435 * 2 1 3 29 29 H 1.08004 * 126.90800 * 0.07417 * 4 3 2 30 30 H 1.09001 * 109.47243 * 215.00330 * 6 5 4 31 31 H 1.08999 * 109.47712 * 335.00370 * 6 5 4 32 32 H 1.00900 * 111.00031 * 303.95756 * 7 6 5 33 33 H 0.97002 * 119.99571 * 180.02562 * 13 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 6 2.8752 1.9193 0.8984 5 6 3.0530 3.2080 0.5250 6 6 3.9221 4.2328 1.2073 7 7 5.2376 4.2717 0.5548 8 6 6.1135 5.2623 1.1945 9 1 5.5190 6.1149 1.5228 10 6 7.1534 5.7254 0.2070 11 1 8.0636 5.1589 0.0757 12 6 6.9430 6.8724 -0.5287 13 7 7.8040 7.2243 -1.4585 14 14 5.4351 7.9262 -0.2049 15 1 5.7156 8.8612 0.9141 16 1 5.1018 8.7020 -1.4266 17 1 4.2891 7.0532 0.1550 18 6 6.8047 4.6272 2.4028 19 9 7.4706 3.4643 2.0010 20 9 7.7274 5.5309 2.9405 21 9 5.8479 4.3056 3.3715 22 7 2.3055 3.3932 -0.5688 23 7 1.7051 2.2919 -0.8541 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0276 -0.0005 27 1 1.8933 -0.5138 -0.8900 28 1 1.8933 -0.5137 0.8900 29 1 3.3272 1.4204 1.7430 30 1 3.4519 5.2136 1.1357 31 1 4.0448 3.9645 2.2566 32 1 5.6664 3.3584 0.5509 33 1 7.6562 8.0314 -1.9759 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000896697742.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 01:11:20 Heat of formation + Delta-G solvation = -55.642501 kcal Electronic energy + Delta-G solvation = -22121.822465 eV Core-core repulsion = 18190.968289 eV Total energy + Delta-G solvation = -3930.854176 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 278.105 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -49.23860 -46.81381 -46.62286 -43.08200 -36.36446 -35.30719 -32.78294 -31.30686 -30.86620 -28.50753 -24.88428 -24.76221 -24.63184 -21.66118 -20.90076 -20.64447 -18.20020 -17.56753 -17.38879 -16.89875 -16.50004 -16.36173 -14.98018 -14.75991 -14.53568 -14.13574 -13.89215 -13.65123 -13.48828 -13.21597 -13.12351 -12.92369 -12.85998 -12.78893 -12.61139 -12.49715 -11.98433 -11.80378 -11.49445 -11.34780 -10.89038 -10.57899 -10.48698 -9.99261 -9.87923 -9.57866 -9.07269 -8.70967 -7.69687 -6.24431 -4.33079 1.70588 2.36120 2.74121 3.27248 3.37459 3.41488 3.72864 4.18941 4.34196 4.50114 4.52182 4.64734 4.75411 4.84820 5.03982 5.05504 5.17685 5.24850 5.27208 5.32405 5.54935 5.59926 5.72866 5.98007 6.09459 6.21990 6.38819 6.66858 7.14559 7.71572 7.98679 8.25247 8.72491 8.77869 9.33935 10.86015 Molecular weight = 278.10amu Principal moments of inertia in cm(-1) A = 0.019368 B = 0.005719 C = 0.004846 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1445.324199 B = 4894.689768 C = 5776.703061 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C 0.113 3.887 3 N -0.297 5.297 4 C -0.054 4.054 5 C 0.000 4.000 6 C 0.119 3.881 7 N -0.655 5.655 8 C 0.158 3.842 9 H 0.081 0.919 10 C -0.508 4.508 11 H 0.084 0.916 12 C 0.098 3.902 13 N -0.875 5.875 14 Si 0.874 3.126 15 H -0.275 1.275 16 H -0.282 1.282 17 H -0.253 1.253 18 C 0.413 3.587 19 F -0.192 7.192 20 F -0.182 7.182 21 F -0.211 7.211 22 N -0.248 5.248 23 N -0.091 5.091 24 H 0.063 0.937 25 H 0.075 0.925 26 H 0.080 0.920 27 H 0.097 0.903 28 H 0.103 0.897 29 H 0.187 0.813 30 H 0.088 0.912 31 H 0.051 0.949 32 H 0.335 0.665 33 H 0.271 0.729 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.390 -13.172 7.543 18.977 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.225 4.225 2 C -0.008 4.008 3 N -0.091 5.091 4 C -0.205 4.205 5 C -0.138 4.138 6 C -0.012 4.012 7 N -0.287 5.287 8 C 0.049 3.951 9 H 0.098 0.902 10 C -0.546 4.546 11 H 0.102 0.898 12 C -0.109 4.109 13 N -0.509 5.509 14 Si 0.700 3.300 15 H -0.200 1.200 16 H -0.208 1.208 17 H -0.177 1.177 18 C 0.356 3.644 19 F -0.174 7.174 20 F -0.163 7.163 21 F -0.193 7.193 22 N -0.115 5.115 23 N -0.071 5.071 24 H 0.082 0.918 25 H 0.094 0.906 26 H 0.099 0.901 27 H 0.116 0.884 28 H 0.121 0.879 29 H 0.204 0.796 30 H 0.106 0.894 31 H 0.069 0.931 32 H 0.155 0.845 33 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges -12.377 -12.328 5.639 18.357 hybrid contribution 0.266 -0.552 2.068 2.157 sum -12.111 -12.880 7.707 19.286 Atomic orbital electron populations 1.22072 0.92887 1.03449 1.04050 1.22025 0.96748 0.76931 1.05069 1.47394 1.30950 1.11810 1.18963 1.23380 1.01006 0.95848 1.00231 1.21971 1.01494 0.94283 0.96066 1.20540 0.89860 0.96589 0.94178 1.61565 1.01303 1.11356 1.54475 1.20936 0.93394 0.92217 0.88590 0.90163 1.20424 1.02511 1.09879 1.21815 0.89784 1.24893 0.95921 0.96756 0.93362 1.69869 1.36041 1.24608 1.20427 0.86881 0.84158 0.80559 0.78416 1.20028 1.20816 1.17665 1.22993 0.78121 0.76783 0.86522 1.93058 1.82133 1.51593 1.90579 1.93109 1.68152 1.67442 1.87606 1.93045 1.64541 1.93532 1.68196 1.75125 1.08135 1.15407 1.12822 1.78256 1.21118 0.92979 1.14723 0.91807 0.90638 0.90091 0.88429 0.87878 0.79625 0.89374 0.93108 0.84535 0.91940 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.07 10.04 37.16 0.37 -0.69 16 2 C 0.11 0.82 7.18 -4.04 -0.03 0.79 16 3 N -0.30 -3.75 3.44 -61.26 -0.21 -3.96 16 4 C -0.05 -0.70 11.50 -17.05 -0.20 -0.90 16 5 C 0.00 0.01 6.76 -82.78 -0.56 -0.55 16 6 C 0.12 2.13 5.98 -4.98 -0.03 2.10 16 7 N -0.66 -13.67 6.22 -109.22 -0.68 -14.35 16 8 C 0.16 3.56 1.76 -68.87 -0.12 3.44 16 9 H 0.08 1.80 4.95 -51.93 -0.26 1.54 16 10 C -0.51 -13.71 8.66 -34.44 -0.30 -14.01 16 11 H 0.08 2.48 8.01 -52.48 -0.42 2.06 16 12 C 0.10 2.73 5.47 -17.82 -0.10 2.63 16 13 N -0.87 -25.83 13.96 55.43 0.77 -25.06 16 14 Si 0.87 20.97 26.99 -169.99 -4.59 16.38 16 15 H -0.27 -6.36 7.11 56.52 0.40 -5.96 16 16 H -0.28 -6.84 7.11 56.52 0.40 -6.44 16 17 H -0.25 -5.86 6.24 56.52 0.35 -5.51 16 18 C 0.41 8.53 2.80 37.16 0.10 8.64 16 19 F -0.19 -3.94 16.18 2.25 0.04 -3.90 16 20 F -0.18 -3.97 16.89 2.25 0.04 -3.93 16 21 F -0.21 -3.85 15.24 2.25 0.03 -3.81 16 22 N -0.25 -4.81 12.41 33.29 0.41 -4.39 16 23 N -0.09 -1.52 12.91 60.35 0.78 -0.74 16 24 H 0.06 0.45 8.14 -51.93 -0.42 0.02 16 25 H 0.07 0.61 8.12 -51.93 -0.42 0.19 16 26 H 0.08 0.31 8.14 -51.93 -0.42 -0.11 16 27 H 0.10 0.61 8.14 -51.93 -0.42 0.19 16 28 H 0.10 0.45 8.07 -51.93 -0.42 0.03 16 29 H 0.19 1.72 8.06 -52.48 -0.42 1.29 16 30 H 0.09 1.68 7.48 -51.93 -0.39 1.29 16 31 H 0.05 0.80 6.18 -51.93 -0.32 0.48 16 32 H 0.33 6.63 7.70 -39.29 -0.30 6.32 16 33 H 0.27 7.48 8.31 -40.82 -0.34 7.14 16 LS Contribution 296.13 15.07 4.46 4.46 Total: -1.00 -32.15 296.13 -3.20 -35.35 By element: Atomic # 1 Polarization: 5.94 SS G_CDS: -3.40 Total: 2.53 kcal Atomic # 6 Polarization: 2.29 SS G_CDS: -0.85 Total: 1.44 kcal Atomic # 7 Polarization: -49.59 SS G_CDS: 1.08 Total: -48.51 kcal Atomic # 9 Polarization: -11.76 SS G_CDS: 0.11 Total: -11.65 kcal Atomic # 14 Polarization: 20.97 SS G_CDS: -4.59 Total: 16.38 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -32.15 -3.20 -35.35 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000896697742.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.293 kcal (2) G-P(sol) polarization free energy of solvation -32.150 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.443 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.199 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.349 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.643 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds